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Volumn 47, Issue 3, 1997, Pages 661-669

Inter- and intraspecific genetic analysis of the genus Saccharomonospora with 16S to 23S ribosomal DNA (rDNA) and 23S to 5S rDNA internally transcribed spacer sequences

Author keywords

[No Author keywords available]

Indexed keywords

RIBOSOME DNA;

EID: 0342683809     PISSN: 00207713     EISSN: None     Source Type: Journal    
DOI: 10.1099/00207713-47-3-661     Document Type: Article
Times cited : (31)

References (41)
  • 1
    • 0014331541 scopus 로고
    • Farmer's lung: A study of an early acute fatal case
    • Barrowcliff, D. E., and P. G. Arblaster. 1968. Farmer's lung: a study of an early acute fatal case. Thorax 23:490-500.
    • (1968) Thorax , vol.23 , pp. 490-500
    • Barrowcliff, D.E.1    Arblaster, P.G.2
  • 2
    • 0024084750 scopus 로고
    • Transcriptional analysis of the 16S rRNA gene of the rmD gene set of Streptomyces coelicolor A3(2)
    • Baylis, H. A., and M. J. Bibb. 1988. Transcriptional analysis of the 16S rRNA gene of the rmD gene set of Streptomyces coelicolor A3(2). Mol. Microbiol. 2:569-579.
    • (1988) Mol. Microbiol. , vol.2 , pp. 569-579
    • Baylis, H.A.1    Bibb, M.J.2
  • 3
    • 0019513663 scopus 로고
    • Gene organization and primary structure of a ribosomal RNA operon from Escherichia coli
    • Brosius, J., T. J. Dull, D. D. Sleeter, and H. F. Noller. 1981. Gene organization and primary structure of a ribosomal RNA operon from Escherichia coli. J. Mol. Biol. 148:107-127.
    • (1981) J. Mol. Biol. , vol.148 , pp. 107-127
    • Brosius, J.1    Dull, T.J.2    Sleeter, D.D.3    Noller, H.F.4
  • 4
    • 0028357969 scopus 로고
    • Typing of Staphylococcus aureus by amplification of the 16S-23S rRNA intergenic spacer sequences
    • Dolzani, L., E. Tonin, C. Lagatolla, and C. Monti-Bragadin. 1994. Typing of Staphylococcus aureus by amplification of the 16S-23S rRNA intergenic spacer sequences. FEMS Microbiol. Lett. 119:167-174.
    • (1994) FEMS Microbiol. Lett. , vol.119 , pp. 167-174
    • Dolzani, L.1    Tonin, E.2    Lagatolla, C.3    Monti-Bragadin, C.4
  • 5
    • 0022182564 scopus 로고
    • Nucleotide sequence of the Bacillus subtilis ribosomal RNA operon, rmB
    • Green, C. J., G. C. Stewart, M. A. Hollis, B. S. Vold, and K. F. Bott. 1985. Nucleotide sequence of the Bacillus subtilis ribosomal RNA operon, rmB. Gene 37:261-266.
    • (1985) Gene , vol.37 , pp. 261-266
    • Green, C.J.1    Stewart, G.C.2    Hollis, M.A.3    Vold, B.S.4    Bott, K.F.5
  • 6
    • 0019822119 scopus 로고
    • Hypersensitivity pneumonitis due to Saccharomonospora viridis diagnosed by inhalation challenge
    • Greene, J. G., M. W. Treuhaft, and R. M. Arnsell. 1981. Hypersensitivity pneumonitis due to Saccharomonospora viridis diagnosed by inhalation challenge. Ann. Allergy 47:449-452.
    • (1981) Ann. Allergy , vol.47 , pp. 449-452
    • Greene, J.G.1    Treuhaft, M.W.2    Arnsell, R.M.3
  • 7
    • 0023734966 scopus 로고
    • Taxonomic revision of the genus Saccharomonospora and description of Saccharomonospora glauca sp. nov
    • Greiner-Mai, E., F. Korn-Wendisch, and H. J. Kutzner. 1988. Taxonomic revision of the genus Saccharomonospora and description of Saccharomonospora glauca sp. nov. Int. J. Syst. Bacteriol. 38:398-405.
    • (1988) Int. J. Syst. Bacteriol. , vol.38 , pp. 398-405
    • Greiner-Mai, E.1    Korn-Wendisch, F.2    Kutzner, H.J.3
  • 8
    • 0023126649 scopus 로고
    • Morphological and biochemical characterization and emended descriptions of thermophilic actinomycetes species
    • Greiner-Mai, E., R. M. Kroppenstedt, F. Korn-Wendisch, and H. J. Kutzner. 1987. Morphological and biochemical characterization and emended descriptions of thermophilic actinomycetes species. Syst. Appl. Microbiol. 9: 97-109.
    • (1987) Syst. Appl. Microbiol. , vol.9 , pp. 97-109
    • Greiner-Mai, E.1    Kroppenstedt, R.M.2    Korn-Wendisch, F.3    Kutzner, H.J.4
  • 9
    • 0011962836 scopus 로고
    • A new species of the genus Micropolyspora-Micropolyspora caesia n. sp
    • Kalakoutskii, L. V. 1964. A new species of the genus Micropolyspora-Micropolyspora caesia n. sp. Mikrobiologiya 33:765-768.
    • (1964) Mikrobiologiya , vol.33 , pp. 765-768
    • Kalakoutskii, L.V.1
  • 10
    • 0027520142 scopus 로고
    • Gene organization and primary structure of a ribosomal RNA gene cluster from Streptomyces griseus subsp. griseus
    • Kim, E., H. Kim, S.-P. Hong, K. H. Kang, Y. H. Kho, and Y.-H. Park. 1993. Gene organization and primary structure of a ribosomal RNA gene cluster from Streptomyces griseus subsp. griseus. Gene 132:21-31.
    • (1993) Gene , vol.132 , pp. 21-31
    • Kim, E.1    Kim, H.2    Hong, S.-P.3    Kang, K.H.4    Kho, Y.H.5    Park, Y.-H.6
  • 12
    • 0028970331 scopus 로고
    • A phylogenetic analysis of the genus Saccharomonospora conducted with 16S rRNA gene sequences
    • Kim, S.-B., J.-H. Yoon, H. Kim, S. T. Lee, Y.-H. Park, and M. Goodfellow. 1995. A phylogenetic analysis of the genus Saccharomonospora conducted with 16S rRNA gene sequences. Int. J. Syst. Bacteriol. 45:351-356.
    • (1995) Int. J. Syst. Bacteriol. , vol.45 , pp. 351-356
    • Kim, S.-B.1    Yoon, J.-H.2    Kim, H.3    Lee, S.T.4    Park, Y.-H.5    Goodfellow, M.6
  • 13
    • 0019389373 scopus 로고
    • Taxonomic study of some members of Micropolyspora and Saccharomonospora
    • Kurup, V. P. 1981. Taxonomic study of some members of Micropolyspora and Saccharomonospora. Microbiologica (Bologna) 4:249-259.
    • (1981) Microbiologica (Bologna) , vol.4 , pp. 249-259
    • Kurup, V.P.1
  • 14
    • 0012006401 scopus 로고
    • Thermophilic actinomycetes, their role in hypersensitivity pneumonitis
    • L. Ortiz-Ortiz, L. F. Bojalil, and V. Yakoleff (ed.), Academic Press, Orlando, Fla.
    • Kurup, V. P. 1984. Thermophilic actinomycetes, their role in hypersensitivity pneumonitis, p. 145-159. In L. Ortiz-Ortiz, L. F. Bojalil, and V. Yakoleff (ed.), Biological, biochemical and biomedical aspects of actinomycetes. Academic Press, Orlando, Fla.
    • (1984) Biological, Biochemical and Biomedical Aspects of Actinomycetes , pp. 145-159
    • Kurup, V.P.1
  • 15
    • 0017870752 scopus 로고
    • Cloning of Beneckea genes in Escherichia coli
    • Lamfrom, H., A. Sarabhai, and J. Abelson. 1978. Cloning of Beneckea genes in Escherichia coli. J. Bacteriol. 133:354-363.
    • (1978) J. Bacteriol. , vol.133 , pp. 354-363
    • Lamfrom, H.1    Sarabhai, A.2    Abelson, J.3
  • 16
    • 0008048504 scopus 로고
    • Rapid determination of 16S ribosomal RNA sequences for phylogenetic analyses
    • Lane, D. J., B. Pace, G. J. Olsen, D. A. Stahl, and M. L. Sogin. 1985. Rapid determination of 16S ribosomal RNA sequences for phylogenetic analyses. Proc. Natl. Acad. Sci. USA 82:6955-6959.
    • (1985) Proc. Natl. Acad. Sci. USA , vol.82 , pp. 6955-6959
    • Lane, D.J.1    Pace, B.2    Olsen, G.J.3    Stahl, D.A.4    Sogin, M.L.5
  • 17
    • 0030031126 scopus 로고    scopus 로고
    • 16S rRNA and 16S to 23S internally transcribed spacer sequence analyses reveal inter- and interspecific Bifidobacterium phylogeny
    • Leblond-Bourget, N., H. Philippe, I. Mangin, and B. Decaris. 1996. 16S rRNA and 16S to 23S internally transcribed spacer sequence analyses reveal inter-and interspecific Bifidobacterium phylogeny. Int. J. Syst. Bacteriol. 46: 102-111.
    • (1996) Int. J. Syst. Bacteriol. , vol.46 , pp. 102-111
    • Leblond-Bourget, N.1    Philippe, H.2    Mangin, I.3    Decaris, B.4
  • 18
    • 0002768530 scopus 로고
    • A critical evaluation of the genera of aerobic actinomycetes
    • H. Prauser (ed.), Gustav Fischer Verlag, Jena, Germany
    • Lechevalier, M. P., and H. A. Lechevalier. 1970. A critical evaluation of the genera of aerobic actinomycetes, p. 393-405. In H. Prauser (ed.), The Actinomycetales. Gustav Fischer Verlag, Jena, Germany.
    • (1970) The Actinomycetales , pp. 393-405
    • Lechevalier, M.P.1    Lechevalier, H.A.2
  • 19
    • 0026569655 scopus 로고
    • Characterization of natural populations of Nitrobacter spp. using PCR/RFLP analysis of the ribosomal intergenic spacer
    • Navarro, E., P. Simonet, P. Normand, and R. Bardin. 1992. Characterization of natural populations of Nitrobacter spp. using PCR/RFLP analysis of the ribosomal intergenic spacer. Arch. Microbiol. 157:107-115.
    • (1992) Arch. Microbiol. , vol.157 , pp. 107-115
    • Navarro, E.1    Simonet, P.2    Normand, P.3    Bardin, R.4
  • 20
    • 0001355993 scopus 로고
    • Distribution of actinomycetes in soil. X. New genus and species of monosporic actinomycetes
    • Nonomura, H., and Y. Ohara. 1971. Distribution of actinomycetes in soil. X. New genus and species of monosporic actinomycetes. J. Ferment. Technol. 49:895-903.
    • (1971) J. Ferment. Technol. , vol.49 , pp. 895-903
    • Nonomura, H.1    Ohara, Y.2
  • 21
    • 0026603595 scopus 로고
    • Analysis of a ribosomal RNA operon in the actinomycete Frankia
    • Normand, P., B. Cournoyer, P. Simonet, and S. Nazaret. 1992. Analysis of a ribosomal RNA operon in the actinomycete Frankia. Gene 111:119-124.
    • (1992) Gene , vol.111 , pp. 119-124
    • Normand, P.1    Cournoyer, B.2    Simonet, P.3    Nazaret, S.4
  • 22
    • 0024321833 scopus 로고
    • Organization and nucleotide sequence analysis of a ribosomal RNA gene cluster from Streptomyces ambofaciens
    • Pernodet, J.-L., F. Boccard, M.-T. Alegre, J. Gagnat, and M. Guérineau. 1989. Organization and nucleotide sequence analysis of a ribosomal RNA gene cluster from Streptomyces ambofaciens. Gene 79:33-46.
    • (1989) Gene , vol.79 , pp. 33-46
    • Pernodet, J.-L.1    Boccard, F.2    Alegre, M.-T.3    Gagnat, J.4    Guérineau, M.5
  • 23
    • 0026424317 scopus 로고
    • Sequence of the rRNA gene and organization of ribosomal RNA operons in Streptomyces rimosus
    • Plohl, M., and V. Gamulin. 1991. Sequence of the rRNA gene and organization of ribosomal RNA operons in Streptomyces rimosus. FEMS Microbiol. Lett. 77:139-144.
    • (1991) FEMS Microbiol. Lett. , vol.77 , pp. 139-144
    • Plohl, M.1    Gamulin, V.2
  • 24
    • 0001854960 scopus 로고
    • Saccharomonospora azurea sp. nov., a new species from soil
    • Runmao, H. 1987. Saccharomonospora azurea sp. nov., a new species from soil. Int. J. Syst. Bacteriol. 37:60-61.
    • (1987) Int. J. Syst. Bacteriol. , vol.37 , pp. 60-61
    • Runmao, H.1
  • 26
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N., and M. Nei. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4:406-425.
    • (1987) Mol. Biol. Evol. , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 29
    • 0025153770 scopus 로고
    • Mechanism and regulation of bacterial ribosomal RNA processing
    • Srivastava, A. K., and D. Schlessinger. 1990. Mechanism and regulation of bacterial ribosomal RNA processing. Annu. Rev. Microbiol. 44:105-129.
    • (1990) Annu. Rev. Microbiol. , vol.44 , pp. 105-129
    • Srivastava, A.K.1    Schlessinger, D.2
  • 30
    • 0028028182 scopus 로고
    • Taxonomic note: A place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology
    • Stackebrandt, E., and B. M. Goebel. 1994. Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int. J. Syst. Bacteriol. 44:846-849.
    • (1994) Int. J. Syst. Bacteriol. , vol.44 , pp. 846-849
    • Stackebrandt, E.1    Goebel, B.M.2
  • 31
    • 0023991789 scopus 로고
    • Molecular cloning and characterization of an rRNA operon in Streptomyces lividans TK21
    • Suzuki, Y., Y. Ono, A. Nagata, and T. Yamada. 1988. Molecular cloning and characterization of an rRNA operon in Streptomyces lividans TK21. J. Bacteriol. 170:1631-1636.
    • (1988) J. Bacteriol. , vol.170 , pp. 1631-1636
    • Suzuki, Y.1    Ono, Y.2    Nagata, A.3    Yamada, T.4
  • 32
    • 0024283903 scopus 로고
    • The nucleotide sequence of 16S rRNA gene from Streptomyces lividans TK21
    • Suzuki, Y., and T. Yamada. 1988. The nucleotide sequence of 16S rRNA gene from Streptomyces lividans TK21. Nucleic Acids Res. 16:370.
    • (1988) Nucleic Acids Res. , vol.16 , pp. 370
    • Suzuki, Y.1    Yamada, T.2
  • 33
    • 0022904925 scopus 로고
    • Organization of the ribosomal RNA genes in Mycoplasma hyopneumoniae: The 5S rRNA gene is separated from the 16S and 23S rRNA genes
    • Taschke, C., M. Q. Klinkert, J. Wolters, and R. Herrmann. 1986. Organization of the ribosomal RNA genes in Mycoplasma hyopneumoniae: the 5S rRNA gene is separated from the 16S and 23S rRNA genes. Mol. Gen. Genet. 205:428-433.
    • (1986) Mol. Gen. Genet. , vol.205 , pp. 428-433
    • Taschke, C.1    Klinkert, M.Q.2    Wolters, J.3    Herrmann, R.4
  • 34
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice
    • Thompson, J. D., D. G. Higgins, and T. J. Gibson. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice. Nucleic Acids Res. 22:4673-4680.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 35
    • 0021769683 scopus 로고
    • The number of ribosomal RNA genes in Thermus thermophilus HB8
    • Ulbrich, N., I. Kumagai, and V. A. Erdmann. 1984. The number of ribosomal RNA genes in Thermus thermophilus HB8. Nucleic Acids Res. 12:2055-2060.
    • (1984) Nucleic Acids Res. , vol.12 , pp. 2055-2060
    • Ulbrich, N.1    Kumagai, I.2    Erdmann, V.A.3
  • 37
    • 0025734615 scopus 로고
    • A comparative study of the ribosomal RNA operons of Streptomyces coelicolor A3(2) and sequence analysis of rmA
    • Van Wezel, G. P., E. Vijgenboom, and L. Bosch. 1991. A comparative study of the ribosomal RNA operons of Streptomyces coelicolor A3(2) and sequence analysis of rmA. Nucleic Acids Res. 19:4399-4403.
    • (1991) Nucleic Acids Res. , vol.19 , pp. 4399-4403
    • Van Wezel, G.P.1    Vijgenboom, E.2    Bosch, L.3
  • 38
    • 0021357254 scopus 로고
    • Two large clusters with thirty seven transfer RNA genes adjacent to ribosomal RNA gene sets in Bacillus subtilis
    • Wawrousek, E. F., N. Narasimhan, and J. N. Hansen. 1984. Two large clusters with thirty seven transfer RNA genes adjacent to ribosomal RNA gene sets in Bacillus subtilis. J. Biol. Chem. 259:3694-3702.
    • (1984) J. Biol. Chem. , vol.259 , pp. 3694-3702
    • Wawrousek, E.F.1    Narasimhan, N.2    Hansen, J.N.3
  • 40
    • 0343554782 scopus 로고    scopus 로고
    • Restriction fragment length polymorphism analysis of PCR-amplified 16S ribosomal DNA for rapid identification of Saccharomonospora strains
    • Yoon, J.-H., S. T. Lee, S.-B. Kim, W. Y. Kim, M. Goodfellow, and Y.-H. Park. 1997. Restriction fragment length polymorphism analysis of PCR-amplified 16S ribosomal DNA for rapid identification of Saccharomonospora strains. Int. J. Syst. Bacteriol. 47:111-114.
    • (1997) Int. J. Syst. Bacteriol. , vol.47 , pp. 111-114
    • Yoon, J.-H.1    Lee, S.T.2    Kim, S.-B.3    Kim, W.Y.4    Goodfellow, M.5    Park, Y.-H.6
  • 41
    • 0030250309 scopus 로고    scopus 로고
    • Rapid identification of Saccharomonospora strains by multiplex PCR using species-specific primers within the 16S rRNA gene
    • Yoon, J.-H., S. T. Lee, Y. K. Shin, S.-B. Kim, H.-J. Kim, M. Goodfellow, and Y.-H. Park. 1996. Rapid identification of Saccharomonospora strains by multiplex PCR using species-specific primers within the 16S rRNA gene. J. Microbiol. Methods 27:89-95.
    • (1996) J. Microbiol. Methods , vol.27 , pp. 89-95
    • Yoon, J.-H.1    Lee, S.T.2    Shin, Y.K.3    Kim, S.-B.4    Kim, H.-J.5    Goodfellow, M.6    Park, Y.-H.7


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