-
1
-
-
0034598746
-
Distinct types of diffuse large B-cell lymphoma identified by gene expression profiling
-
Alizadeh, A. A., Eisen, M. B., Davis, R. E., Ma, C., Lossos, I. S., Rosenwald, A., Boldrick, J. C., Sabet, H., Tran, T., Yu, X., Powell, J. I., Yang, L., Marti, G. E., Moore, T., Hudson, J. Jr, Lu, L., Lewis, D. B., Tibshirani, R., Sherlock, G., Chan, W. C., Greiner, T. C., Weisenburger, D. D., Armitage, J. O., Warnke, R., Levy, R., Wilson, W., Grever, M. R., Byrd, J. C., Botstein, D., Brown, P. O. & Staudt, L. M. (2000). Distinct Types of Diffuse Large B-cell Lymphoma Identified by Gene Expression Profiling. Nature 403: 503-511.
-
(2000)
Nature
, vol.403
, pp. 503-511
-
-
Alizadeh, A.A.1
Eisen, M.B.2
Davis, R.E.3
Ma, C.4
Lossos, I.S.5
Rosenwald, A.6
Boldrick, J.C.7
Sabet, H.8
Tran, T.9
Yu, X.10
Powell, J.I.11
Yang, L.12
Marti, G.E.13
Moore, T.14
Hudson Jr., J.15
Lu, L.16
Lewis, D.B.17
Tibshirani, R.18
Sherlock, G.19
Chan, W.C.20
Greiner, T.C.21
Weisenburger, D.D.22
Armitage, J.O.23
Warnke, R.24
Levy, R.25
Wilson, W.26
Grever, M.R.27
Byrd, J.C.28
Botstein, D.29
Brown, P.O.30
Staudt, L.M.31
more..
-
2
-
-
0033536012
-
Broad patterns of gene expression revealed by clustering analysis of Tumor and normal colon tissues probed with oligonucleotide arrays
-
Alon, U., Barkai, N., Notterman, D. A., Gish, K., Ybarra, S., Mack, D. & Levine, A. J. (1999). Broad Patterns of Gene Expression Revealed by Clustering Analysis of Tumor and Normal Colon Tissues Probed with Oligonucleotide Arrays. Proc. Natl. Acad. Sci. USA. 96: 6745-6750.
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.96
, pp. 6745-6750
-
-
Alon, U.1
Barkai, N.2
Notterman, D.A.3
Gish, K.4
Ybarra, S.5
Mack, D.6
Levine, A.J.7
-
3
-
-
0012724465
-
Exploring the new world of the genome with DNA microarrays
-
Brown, P. O. & Botstein, D. (1999). Exploring the New World of the Genome with DNA Microarrays. Nature Biotechnol. 14: 1675-1680.
-
(1999)
Nature Biotechnol.
, vol.14
, pp. 1675-1680
-
-
Brown, P.O.1
Botstein, D.2
-
4
-
-
0034564271
-
Analysis of the gene expression microarrays for phenotype classification
-
Califano, A., Stolovitzky, G. & Tu, Y. (2000). Analysis of the Gene Expression Microarrays for Phenotype Classification. Proc. Intell. Syst. Mol. Biol. 8: 75-85.
-
(2000)
Proc. Intell. Syst. Mol. Biol.
, vol.8
, pp. 75-85
-
-
Califano, A.1
Stolovitzky, G.2
Tu, Y.3
-
5
-
-
0012724466
-
Application of SOTA, a growing neural network algorithm, to gene expression profile clustering
-
Cummings, C. A. (2001). Application of SOTA, a Growing Neural Network Algorithm, to Gene Expression Profile Clustering. Briefings in Bioinformatics 2: 402-404.
-
(2001)
Briefings in Bioinformatics
, vol.2
, pp. 402-404
-
-
Cummings, C.A.1
-
6
-
-
0031042985
-
Phylogenetic reconstruction using a growing neural network that adopts the topology of a phylogenetic tree
-
Dopazo, J. & Carazo, J. M. (1997). Phylogenetic Reconstruction Using a Growing Neural Network that Adopts the Topology of a Phylogenetic Tree. J. Mol. Evol. 44: 226-233.
-
(1997)
J. Mol. Evol.
, vol.44
, pp. 226-233
-
-
Dopazo, J.1
Carazo, J.M.2
-
7
-
-
0033636139
-
Support vector machine classification and validation of cancer tissue samples using microarray expression data
-
Furey, T. S., Cristianini, N., Duffy, N., Bednarski, D. W., Schummer, M. & Haussler, D. (2000). Support Vector Machine Classification and Validation of Cancer Tissue Samples Using Microarray Expression Data. Bioinformatics 16: 906-914.
-
(2000)
Bioinformatics
, vol.16
, pp. 906-914
-
-
Furey, T.S.1
Cristianini, N.2
Duffy, N.3
Bednarski, D.W.4
Schummer, M.5
Haussler, D.6
-
8
-
-
0034710876
-
Coupled two-way clustering analysis of gene microarray data
-
Getz, G., Levine, E. & Domany, E. (2000). Coupled Two-way Clustering Analysis of Gene Microarray Data. Proc. Natl. Acad. Sci. USA 97: 12079-12084.
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 12079-12084
-
-
Getz, G.1
Levine, E.2
Domany, E.3
-
9
-
-
0033569406
-
Molecular classification of cancer: Class discovery and class prediction by gene expression monitoring
-
Golub, T. R., Slonim, D. K., Tamayo, P., Huard, C., Gaasenbeek, M., Mesirov, J. P., Coller, H., Loh, M. L., Downing, J. R., Caligiuri, M. A., Bloomfield, C. D. & Lander, E. S. (1999). Molecular Classification of Cancer: Class Discovery and Class Prediction by Gene Expression Monitoring. Science 286: 531-537.
-
(1999)
Science
, vol.286
, pp. 531-537
-
-
Golub, T.R.1
Slonim, D.K.2
Tamayo, P.3
Huard, C.4
Gaasenbeek, M.5
Mesirov, J.P.6
Coller, H.7
Loh, M.L.8
Downing, J.R.9
Caligiuri, M.A.10
Bloomfield, C.D.11
Lander, E.S.12
-
10
-
-
0035108235
-
A hierarchical unsupervised growing neural network for clustering gene expression patterns
-
Herrero, J., Valencia, A. & Dopazo, J. (2001). A Hierarchical Unsupervised Growing Neural Network for Clustering Gene Expression Patterns. Bioinformatics. 17: 126-136.
-
(2001)
Bioinformatics
, vol.17
, pp. 126-136
-
-
Herrero, J.1
Valencia, A.2
Dopazo, J.3
-
11
-
-
0042121252
-
GEPAS, a web-based resource for microarray gene expression data analysis
-
Herrero, J., Al-Shahrouv, F., Diaz-Uriarte, R., Mateos, A., Vapuerizas, J. M., Santoys, J. & Dopazo, J. (2003). GEPAS, a Web-Based Resource for Microarray Gene Expression Data Analysis. Nucl. Acids. Res. 31: 3461-3467.
-
(2003)
Nucl. Acids. Res.
, vol.31
, pp. 3461-3467
-
-
Herrero, J.1
Al-Shahrouv, F.2
Diaz-Uriarte, R.3
Mateos, A.4
Vapuerizas, J.M.5
Santoys, J.6
Dopazo, J.7
-
12
-
-
0034954414
-
Classification and diagnostic prediction of cancers using gene expression profiling and artificial neural networks
-
Khan, J., Wei, J. S., Ringnér, M., Saal, L. H., Ladanyi, M., Westermann, F., Berthold, F., Schwab, M., Antonescu, C. R., Peterson, C. & Meltzer, P. S. (2001). Classification and Diagnostic Prediction of Cancers Using Gene Expression Profiling and Artificial Neural Networks. Nature Med. 7: 673-579.
-
(2001)
Nature Med.
, vol.7
, pp. 673-579
-
-
Khan, J.1
Wei, J.S.2
Ringnér, M.3
Saal, L.H.4
Ladanyi, M.5
Westermann, F.6
Berthold, F.7
Schwab, M.8
Antonescu, C.R.9
Peterson, C.10
Meltzer, P.S.11
-
13
-
-
0036139278
-
Gene selection for sample classification based on gene expression data: Study of sensitivity to choice of parameters of the GA/KNN method
-
Li, L., Weinberg, C. R., Darden, T. A. & Pedersen, L. G. (2001). Gene Selection for Sample Classification Based on Gene Expression Data: Study of Sensitivity to Choice of Parameters of the GA/KNN Method. Bioinformatics 17: 1131-1142.
-
(2001)
Bioinformatics
, vol.17
, pp. 1131-1142
-
-
Li, L.1
Weinberg, C.R.2
Darden, T.A.3
Pedersen, L.G.4
-
14
-
-
0038561723
-
Supervised neural networks for clustering conditions in DNA array data after reducing noise by clustering gene expression profiles
-
Kluwer Academic Publisher
-
Mateos, A., Herrero, J., Tamames, J. & Dopazo, J. (2002). Supervised Neural Networks for Clustering Conditions in DNA Array Data After Reducing Noise by Clustering Gene Expression Profiles. Microarray Data Analysis II, 91-103. Kluwer Academic Publisher.
-
(2002)
Microarray Data Analysis II
, pp. 91-103
-
-
Mateos, A.1
Herrero, J.2
Tamames, J.3
Dopazo, J.4
-
16
-
-
18244409933
-
Diffuse large B-cell lymphoma outcome prediction by gene-expression profiling and supervised machine learning
-
Ship, M. A., Ross, K. N., Tamayo, P., Weng, A. P., Kutok, J. L., Aguiar, R. C. T., Gaasenbeek, M., Angelo, M., Reich, M., Pinkus, G. S., Ray, T. S., Koval, M. A., Last, K. W., Norton, A., T. Lister, A., Mesirov, J., Neuberg, D. S., Lander, E. S., Aster, J. C. & Golub, T. R. (2002). Diffuse Large B-cell Lymphoma Outcome Prediction by Gene-Expression Profiling and Supervised Machine Learning. Nature Medicine 8: 68-74.
-
(2002)
Nature Medicine
, vol.8
, pp. 68-74
-
-
Shipp, M.A.1
Ross, K.N.2
Tamayo, P.3
Weng, A.P.4
Kutok, J.L.5
Aguiar, R.C.T.6
Gaasenbeek, M.7
Angelo, M.8
Reich, M.9
Pinkus, G.S.10
Ray, T.S.11
Koval, M.A.12
Last, K.W.13
Norton, A.T.14
Lister, A.15
Mesirov, J.16
Neuberg, D.S.17
Lander, E.S.18
Aster, J.C.19
Golub, T.R.20
more..
-
17
-
-
18244409687
-
Gene expression profiling predicts clinical outcome of breast cancer
-
van't Veer, L. J., Dai, H., van de Vijver, M. J., He, Y. D., Hart, A. A. M., Mao, M., Peterse, H. L., van der Kooy, K., Marton, M. J., Witteveen, A. T., Schreiber, G. J., Kerkhoven, R. M., Roberts, C., Linsley, P. S., Bernards, R. & Friend, S. H. (2002). Gene Expression Profiling Predicts Clinical Outcome of Breast Cancer. Nature 415: 530-536.
-
(2002)
Nature
, vol.415
, pp. 530-536
-
-
Van't Veer, L.J.1
Dai, H.2
Van De Vijver, M.J.3
He, Y.D.4
Hart, A.A.M.5
Mao, M.6
Peterse, H.L.7
Van Der Kooy, K.8
Marton, M.J.9
Witteveen, A.T.10
Schreiber, G.J.11
Kerkhoven, R.M.12
Roberts, C.13
Linsley, P.S.14
Bernards, R.15
Friend, S.H.16
-
19
-
-
0034800371
-
Principal component analysis for clustering gene expression data
-
Yeung, K. Y. & Ruzzo, W. L. (2001). Principal Component Analysis for Clustering Gene Expression Data. Bioinformatics 17: 763-774.
-
(2001)
Bioinformatics
, vol.17
, pp. 763-774
-
-
Yeung, K.Y.1
Ruzzo, W.L.2
|