Molecular modeling of various peptide sequences of gliadins and low-molecular-weight glutenin subunits

Nahrung - Food

Volumn 47, Issue 4, 2003, Pages 238-242

  Yaşar, Fatih ^a   Çelik, Süeda ^a   Köksel, Hamit ^a  

^a HACETTEPE UNIVERSITY   (Turkey)

Author keywords

Gliadin; Glutenin; Helical structures; Molecular modeling; Turns

Indexed keywords

GLIADIN; GLUTAMINYLGLUTAMINYLGLUTAMINYLGLUTAMINE; GLUTAMINYLGLUTAMINYLGLUTAMINYLGLUTAMINYLPROLYLVALYLLEUCINE; GLUTENIN; HEPTAPEPTIDE; PENTAPEPTIDE; PROLAMIN; PROLYLGLUTAMINYLGLUTAMINYLPROLYLPHENYLALANYLPROLYLGLUTAMINE; PROLYLGLUTAMINYLGLUTAMINYLPROLYLPROLYLPHENYLALANYLSERINE; PROLYLGLUTAMINYLGLUTAMINYLPROLYLTYROSINE; PROLYLGLUTAMINYLPROLYLGLUTAMINYLPROLYLPHENYLALANYLPROLINE; PROTEIN SUBUNIT; TETRAPEPTIDE; UNCLASSIFIED DRUG;

AMINO ACID SEQUENCE; ARTICLE; MOLECULAR MODEL; MOLECULAR WEIGHT; NUCLEOTIDE REPEAT; PROTEIN CONFORMATION; PROTEIN STRUCTURE; STRUCTURE ANALYSIS;

AMINO ACID SEQUENCE; GLIADIN; GLUTEN; MODELS, MOLECULAR; MOLECULAR STRUCTURE; MOLECULAR WEIGHT; PROTEIN STRUCTURE, SECONDARY; STRUCTURAL HOMOLOGY, PROTEIN;

EID: 0242606894     PISSN: 0027769X     EISSN: None     Source Type: Journal    
DOI: 10.1002/food.200390056     Document Type: Article

References (31)

1. Schofield, J. D., in: Bushuk, W., Rasper, V. F. (Eds.), Wheat Production, Properties and Quality, Chapman & Hall, London 1994, pp. 73-106.
2. Shewry, P. R., Miles, M. J., Tatham, A. S., Prog. Biophys. Molec. Biol. 1994, 61, 37-59.
3. Lasztity, R., Cereal Chemistry, Akademiai Kiado, Budapest 1999.
4. Shewry, P. R., Tatham, A. S., Biochem. J. 1990, 26, 1-12.
5. Tatham, A. S., Shewry, P. R., J. Cereal Sci. 1985, 3, 103-113.
6. Tatham, A. S., Field, J. M., Smith, S. J., Shewry, P. R., J. Cereal Sci. 1987, 5, 203-214.
7. Pezolet, M., Bonenfant, S., Dousseau, F., Popineau, Y., FEBS Lett. 1992, 299, 247-250.
8. Metropolis, N., Rosenbluth, M. N., Teller, A. H., Teller, E., J. Chem. Phys. 1953, 21, 1087-1092.
9. Alder, B. J., Wainwright, T. E., J. Chem. Phys. 1957, 17, 1208-1209.
10. Berg, B. A., Çelik, T., Phys. Rev. Lett. 1992, 69, 2292-2295.
11. Hansmann, U. H., Okamoto, Y., J. Comput. Chem. 1993, 14, 1333-1338.
12. Hao, M. H., Scheraga, H. A., J. Phys. Chem. 1994, 98, 4940-4948.
13. Higo, J., Nakajima, N., Shirai, H., Kidera, A., Nakamura, H., J. Comput. Chem. 1997, 18, 2086-2092.
14. Arkin, H., Yaşar, F., Çelik, T., Çelik, S., Köksel, H., Int. J. Mod. Phys. C 2000, 11, 1595-1606.
15. Arkin, H., Yaşar, F., Çelik, T., Çelik, S., Köksel, H., Int. J. Mod. Phys. C 2001, 12, 281-292.
16. Ferrenberg, A. M., Swendsen, R. H., Phys. Rev. Lett. 1988, 61, 2635-2638.
17. Yaşar, F., Çelik, T., Berg, B. A., Meirovitch, H., J. Comput. Chem. 2000, 21, 1251-1261.
18. Momany, F. A., McGuire, R. F., Burgess, A. W., Scheraga, H. A., J. Phys. Chem. 1975, 79, 2361-2381.
19. Sippl, M. J., Nemethy, G., Scheraga, H. A., J. Phys. Chem. 1984, 88, 6231-6233.
20. von Freyberg, B., Braun, W., J. Comput. Chem. 1993, 14, 510-521.
21. Creighton, T. E., Proteins: Structures and Molecular Properties, W. H. Freeman and Company, New York 1993.
22. Darby, N. J., Creighton, T. E., Protein Structure, IRL Press, Oxford 1993.
23. Bartels, D., Altosaar, I., Harberd, N. P., Barker, R. F., Thompson, R. D., Theor. Appl. Genet. 1986, 72, 845-853.
24. Okita, T. W., Cheesbrough, V., Reeves, C. D., J. Biol. Chem. 1985, 260, 8203-8213.
25. Rafalski, J. A., Scheets, K., Metzler, M., Peterson, D. M., Hedgecoth, C., Soll, D. G., EMBO J. 1984, 3, 1409-1415.
26. Rafalski, J. A., Gene 1986, 43, 221-229.
27. Milner-White, E. J., J. Mol. Biol. 1990, 216, 385-397.
28. Kasarda, D. D., King, G., Kumosinski, F., in: Kumosinski, T. F., Liebman, M. N. (Eds.), Molecular Modelling From Virtual Tools to Real Problems, ACS Symposium Series 576, American Chemical Society, Washington DC 1994, pp. 209-220.
29. Chou, K. C., Anal. Biochem. 2000, 286, 1-16.
30. Hansmann, U. H., Okamoto, Y. J., Curr. Opin. Struct. Biol. 1999, 9, 177-183.
31. Tatham, A. S., Drake, A. F., Shewry, P. R., Biochem. J. 1985, 226, 557-562.