Normal mode analysis of proteins: A comparison of rigid cluster modes with Cα coarse graining

Journal of Molecular Graphics and Modelling

Volumn 22, Issue 3, 2004, Pages 183-193

  Schuyler, Adam D ^a   Chirikjian, Gregory S ^a  

^a Johns Hopkins University   (United States)

Author keywords

Cluster NMA; Coarse grain; Conformational transition; Normal mode analysis; Protein mechanics; Rigid body motion

Indexed keywords

DEGREES OF FREEDOM (MECHANICS); EQUATIONS OF MOTION; MOLECULAR DYNAMICS; PERSONAL COMPUTERS;

COMPUTATIONAL COSTS; NORMAL MODE ANALYSIS (NMA);

PROTEINS;

PROTEIN;

ARTICLE; CLUSTER ANALYSIS; EQUILIBRIUM CONSTANT; MATHEMATICAL COMPUTING; MOLECULAR DYNAMICS; PREDICTION; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN CONFORMATION; PROTEIN FUNCTION; STATISTICAL ANALYSIS; STRUCTURE ACTIVITY RELATION; THEORETICAL STUDY;

EID: 0242558375     PISSN: 10933263     EISSN: None     Source Type: Journal    
DOI: 10.1016/S1093-3263(03)00158-X     Document Type: Article

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