Accurate, robust, and automated longitudinal and cross-sectional brain change analysis

NeuroImage

Volumn 17, Issue 1, 2002, Pages 479-489

  Smith, Stephen M ^a   Zhang, Yongyue ^a   Jenkinson, Mark ^a   Chen, Jacqueline ^a,c   Matthews, P M ^a   Federico, Antonio ^b   De Stefano, Nicola ^b  

^a UNIVERSITY OF OXFORD   (United Kingdom)

^b UNIVERSITY OF SIENA   (Italy)

^c MCGILL UNIVERSITY   (Canada)

Author keywords

Atrophy measurement; Normalized registration; Structural brain analysis

Indexed keywords

AGED; AGING; ARTICLE; BRAIN ATROPHY; BRAIN SIZE; EPILEPSY; FRONTAL LOBE EPILEPSY; HEAD; HUMAN; MAJOR CLINICAL STUDY; MEASUREMENT; NEURORADIOLOGY; NUCLEAR MAGNETIC RESONANCE IMAGING; PRIORITY JOURNAL; SKULL;

EID: 0036742197     PISSN: 10538119     EISSN: None     Source Type: Journal    
DOI: 10.1006/nimg.2002.1040     Document Type: Article

References (19)

1. Evans, A., Collins, L., Holmes, C., Paus, T., MacDonald, D., Zijdenbos, A., Toga, A., Fox, P., Lancaster, and J., Mazziota, J. 1997. A 3D probabilistic atlas of normal human neuroanatomy. In Third Int. Conf. on Functional Mapping of the Human Brain, p. 349.
2. Evans, A. C., Collins, D. L., and Holmes, C. J. 1996. Computational approaches to quantifying human neuroanatomical variability. In Brain Mapping: The Methods (J. C. Mazziotta and A. W. Toga, Eds.), pp. 343-361. Academic Press.
3. Fisher, E., Cothren, R. M., Tkach, J. A., Masaryk, T. J., and Cornhill, F. 1997. Knowledge-based 3D segmentation of the brain in MR images for quantitative multiple sclerosis lesion tracking. In SPIE Proc. Medical Imaging: Image Processing, pp. 19-25.
4. Fox, N. C., and Freeborough, P. A. 1997. Brain atrophy progression measured from registered serial MRI: Validation and application to Alzheimer's disease. J. Magn. Reson. Imag. 7: 1069-1075.
5. Fox, N. C., Freeborough, P. A., and Rossor, M. N. 1996. Visualisation and quantification of rates of atrophy in Alzheimer's disease. Lancet 348: 94-97.
6. Freeborough, P. A., and Fox, N. C. 1997. The boundary shift integral: An accurate and robust measure of cerebral volume changes from registered repeat MRI. IEEE Trans. Med. Imag. 16(5): 623-629.
7. Freeborough, P. A., Woods, R. P., and Fox, N. C. 1996. Accurate registration of serial 3D MR brain images and its application to visualizing change in neurodegenerative disorders. J. Comput. Assist. Tomogr. 20(6): 1012-1022.
8. Ge, Y., Grossman, R. J., Udupa, J. K., Wei, L., Mannon, L. J., Polansky, M., and Kolson, D. L. 1999. Longitudinal quantitative analysis of brain atrophy in relapsing-remitting and secondary-progressive multiple sclerosis. In International Soc. of Magnetic Resonance in Medicine.
9. Hajnal, J. V., Saeed, N., Oatridge, A., Williams, E. J., Young, I. R., and Bydder, G. M. 1995a. Detection of subtle brain changes using subvoxel registration and subtraction of serial MR images. J. Comput. Assist. Tomogr. 19(5): 677-691.
10. Hajnal, J. V., Saeed, N., Soar, E. J., Oatridge, A., Young, I. R., and Bydder, G. M. 1995b. A registration and interpolation procedure for subvoxel matching of serially acquired MR images. J. Comput. Assist. Tomogr. 19(2): 289-296.
11. Jenkinson, M., and Smith, S. M. 2001. A global optimisation method for robust affine registration of brain images. Med. Image Anal. 5(2): 143-156.
12. Lemieux, L., Wieshmann, U. C., Moran, N. F., Fish, D. R., and Shorvon, S. D. 1998. The detection and significance of subtle changes in mixed-signal brain lesions by serial MRI scan matching and spatial normalization. Med. Image Anal. 2(3): 227-242.
13. Reddick, W. E., Glass, J. O., and Langston, J. W. 1999. A non-invasive MRI measure of subtle longitudinal volume changes in brain. In International Soc. of Magnetic Resonance in Medicine.
14. Rudick, R. A., Fisher, E., Lee, J. C., Simon, J., and Jacobs, L. 1999. Use of the brain parenchymal fraction to measure whole brain atrophy in relapsing-remitting MS. Neurology 53(8): 1698-704.
15. Sgouros, S., Natarajan, K., Hockley, A. D., Goldin, J. H., and Wake, M. 1999. Skull base growth in childhood. Pediatr. Neurosurg. 31(5): 259-68, 1999.
16. Smith, S. M. 2000a. Robust automated brain extraction. In Sixth Int. Conf. on Functional Mapping of the Human Brain, p. 625.
17. Smith, S. M. 2000b. Robust automated brain extraction. Hum. Brain Mapp., in press.
18. Smith, S. M., De Stefano, N., Jenkinson, M., and Matthews, P. M. 2001. Normalised accurate measurement of longitudinal brain change. J. Comput. Assist. Tomogr. 25(3): 466-475.
19. Zhang, Y., Brady, M., and Smith, S. 2001. Segmentation of brain MR images through a hidden Markov random field model and the expectation maximization algorithm. IEEE Trans. Med. Imag. 20(1): 45-57.