메뉴 건너뛰기




Volumn 165, Issue 2, 2003, Pages 799-807

An Ac-like Transposable Element Family With Transcriptionally Active Y-Linked Copies in the White Campion, Silene latifolia

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID; COMPLEMENTARY DNA; TRANSPOSASE;

EID: 0242318315     PISSN: 00166731     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article
Times cited : (19)

References (45)
  • 1
    • 0031758470 scopus 로고    scopus 로고
    • Identification of novel random amplified polymorphic DNAs (RAPDs) on the W chromosome of the domesticated silk-worm, Bombyx mori, and the wild silkworm, B. mandarina, and their retrotransposable element-related nucleotide sequences
    • ABE, H., M. KANEHARA, T. TERADA, F. OHBAYASHI, T. SHIMADA et al, 1998 Identification of novel random amplified polymorphic DNAs (RAPDs) on the W chromosome of the domesticated silk-worm, Bombyx mori, and the wild silkworm, B. mandarina, and their retrotransposable element-related nucleotide sequences. Genes Genet. Syst. 73: 243-254.
    • (1998) Genes Genet. Syst. , vol.73 , pp. 243-254
    • Abe, H.1    Kanehara, M.2    Terada, T.3    Ohbayashi, F.4    Shimada, T.5
  • 2
    • 0030801002 scopus 로고    scopus 로고
    • Gapped BLAST and PS1-BLAST: A new generation of protein database search programs
    • ALTSCHUL, S. F., T. L. MADDEN, A. A. SCHAFFER, J. ZHANG, Z. ZHANG et al., 1997 Gapped BLAST and PS1-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25: 3389-3402.
    • (1997) Nucleic Acids Res. , vol.25 , pp. 3389-3402
    • Altschul, S.F.1    Madden, T.L.2    Schaffer, A.A.3    Zhang, J.4    Zhang, Z.5
  • 3
    • 0034284435 scopus 로고    scopus 로고
    • The BED finger, a novel DNA-binding domain in chromatin-boundary-element-binding proteins and transposases
    • ARAVIND, L., 2000 The BED finger, a novel DNA-binding domain in chromatin-boundary-element-binding proteins and transposases. Trends Biochem. Sci. 25 (9): 421-423.
    • (2000) Trends Biochem. Sci. , vol.25 , Issue.9 , pp. 421-423
    • Aravind, L.1
  • 4
    • 0001741062 scopus 로고
    • Genetics of actin related sequences in tomato
    • BERNATZKY, R., and S. TANKSLEY, 1986 Genetics of actin related sequences in tomato. Theor. Appl. Genet. 72: 314-321.
    • (1986) Theor. Appl. Genet. , vol.72 , pp. 314-321
    • Bernatzky, R.1    Tanksley, S.2
  • 5
    • 0027282044 scopus 로고
    • Bcl-x, a bcl-2-related gene that functions as a dominant regulator of apoptotic cell death
    • BOISE, L. H., M. GONZALEZ-GARCIA, C. E. POSTEMA, L. DING, T. LINDSTEN et al., 1993 bcl-x, a bcl-2-related gene that functions as a dominant regulator of apoptotic cell death. Cell 74: 597-608.
    • (1993) Cell , vol.74 , pp. 597-608
    • Boise, L.H.1    Gonzalez-Garcia, M.2    Postema, C.E.3    Ding, L.4    Lindsten, T.5
  • 7
    • 85047681047 scopus 로고    scopus 로고
    • Plant sex determination and sex chromosomes
    • CHARLESWORTH, D., 2002 Plant sex determination and sex chromosomes. Heredity 88: 94-101.
    • (2002) Heredity , vol.88 , pp. 94-101
    • Charlesworth, D.1
  • 8
    • 0001920006 scopus 로고    scopus 로고
    • The evolution of dioecy and plant sex chromosome systems
    • edited by C. AINSWORTH, BIOS, Oxford
    • CHARLESWORTH, D., and D. S. GUTTMAN, 1999 The evolution of dioecy and plant sex chromosome systems, pp. 25-49 in Sex Determination in Plants, edited by C. AINSWORTH, BIOS, Oxford.
    • (1999) Sex Determination in Plants , pp. 25-49
    • Charlesworth, D.1    Guttman, D.S.2
  • 10
    • 0030465902 scopus 로고    scopus 로고
    • Isolation of Y chromosome-specific sequences from Silene latifolia and mapping of male sex-determining genes using representational difference analysis
    • DONNISON, I. S., J. SIROKY, B. VYSKOT, H. SAEDLER and S. R. GRANT, 1996 Isolation of Y chromosome-specific sequences from Silene latifolia and mapping of male sex-determining genes using representational difference analysis. Genetics 144: 1893-1901.
    • (1996) Genetics , vol.144 , pp. 1893-1901
    • Donnison, I.S.1    Siroky, J.2    Vyskot, B.3    Saedler, H.4    Grant, S.R.5
  • 11
    • 0034020465 scopus 로고    scopus 로고
    • Sex chromosomal transposable element accumulation and male-driven substitutional evolution in humans
    • ERLANDSSON, R., J. F. WILSON and S. PAABO, 2000 Sex chromosomal transposable element accumulation and male-driven substitutional evolution in humans. Mol. Biol. Evol. 17: 804-812.
    • (2000) Mol. Biol. Evol. , vol.17 , pp. 804-812
    • Erlandsson, R.1    Wilson, J.F.2    Paabo, S.3
  • 12
    • 0032962952 scopus 로고    scopus 로고
    • A novel pseudoautosomal human gene encodes a putative protein similar to Ac-like transposases
    • ESPOSITO, T., F. GIANFRANCESCO, A. CICCODICOLA, L. MONTANINI, S. MUMM et al., 1999 A novel pseudoautosomal human gene encodes a putative protein similar to Ac-like transposases. Hum. Mol. Genet. 8: 61-67.
    • (1999) Hum. Mol. Genet. , vol.8 , pp. 61-67
    • Esposito, T.1    Gianfrancesco, F.2    Ciccodicola, A.3    Montanini, L.4    Mumm, S.5
  • 13
    • 0034143320 scopus 로고    scopus 로고
    • A highly conserved domain of the maize activator transposase is involved in dimerization
    • ESSERS, L., R. H. ADOLPHS and R. KUNZE, 2000 A highly conserved domain of the maize activator transposase is involved in dimerization. Plant Cell 12: 211-224.
    • (2000) Plant Cell , vol.12 , pp. 211-224
    • Essers, L.1    Adolphs, R.H.2    Kunze, R.3
  • 14
    • 0036250001 scopus 로고    scopus 로고
    • Plant transposable elements: Where genetics meets genomics
    • FESCHOTTE, C., N. JIANG and S. R. WESSLER, 2002 Plant transposable elements: where genetics meets genomics. Nat. Rev. Genet. 3 (5):329-341.
    • (2002) Nat. Rev. Genet. , vol.3 , Issue.5 , pp. 329-341
    • Feschotte, C.1    Jiang, N.2    Wessler, S.R.3
  • 15
    • 0027399530 scopus 로고
    • Identification of protein coding regions by database similarity search
    • GISH, W., and D. J. STATES, 1993 Identification of protein coding regions by database similarity search. Nat. Genet. 3: 266-272.
    • (1993) Nat. Genet. , vol.3 , pp. 266-272
    • Gish, W.1    States, D.J.2
  • 16
    • 0029791403 scopus 로고    scopus 로고
    • Splice site prediction in Arabidopsis thaliana pre-mRNA by combining local and global sequence information
    • HEBSGAARD, S. M., P. G. KORNING, N. TOLSTRUP, J. ENGELBRECHT, P. ROUZE et al., 1996 Splice site prediction in Arabidopsis thaliana pre-mRNA by combining local and global sequence information. Nucleic Acids Res. 24: 3439-3452.
    • (1996) Nucleic Acids Res. , vol.24 , pp. 3439-3452
    • Hebsgaard, S.M.1    Korning, P.G.2    Tolstrup, N.3    Engelbrecht, J.4    Rouze, P.5
  • 17
    • 0032950568 scopus 로고    scopus 로고
    • A new Ac-like transposon of Arabidopsis is associated with a deletion of the RPS5 disease resistance gene
    • HENK, A. D., R. F. WARREN and R. W. INNES, 1999 A new Ac-like transposon of Arabidopsis is associated with a deletion of the RPS5 disease resistance gene. Genetics 151: 1581-1589.
    • (1999) Genetics , vol.151 , pp. 1581-1589
    • Henk, A.D.1    Warren, R.F.2    Innes, R.W.3
  • 18
    • 0027946239 scopus 로고
    • Degenerating gypsy retrotransposons in a male fertility gene on the Y chromosome of Drosophila hydei
    • HOCHSTENBACH, R., H. HARHANGI, K. SCHOUREN and W. HENNIG, 1994 Degenerating gypsy retrotransposons in a male fertility gene on the Y chromosome of Drosophila hydei. J. Mol. Evol. 39: 452-465.
    • (1994) J. Mol. Evol. , vol.39 , pp. 452-465
    • Hochstenbach, R.1    Harhangi, H.2    Schouren, K.3    Hennig, W.4
  • 19
    • 0029923345 scopus 로고    scopus 로고
    • Epigenetic control of sexual phenotype in a dioecious plant, Melandrium album
    • JANOUSEK, B., J. SIROKY and B. VYSKOT, 1996 Epigenetic control of sexual phenotype in a dioecious plant, Melandrium album. Mol. Gen. Genet. 250: 483-490.
    • (1996) Mol. Gen. Genet. , vol.250 , pp. 483-490
    • Janousek, B.1    Siroky, J.2    Vyskot, B.3
  • 20
    • 85157961642 scopus 로고    scopus 로고
    • The hAT and CACTA superfamilies of plant transposons
    • edited by N. L. CRAIG, R. CRAIGIE, M. GELLERT and A. L. LAMBWITZ. ASM Press, Washington, DC
    • KUNZE, R., and C. F. WEIL, 2002 The hAT and CACTA superfamilies of plant transposons, pp. 565-610 in Mobile DNA II, edited by N. L. CRAIG, R. CRAIGIE, M. GELLERT and A. L. LAMBWITZ. ASM Press, Washington, DC.
    • (2002) Mobile DNA II , pp. 565-610
    • Kunze, R.1    Weil, C.F.2
  • 22
    • 0033615708 scopus 로고    scopus 로고
    • Four evolutionary strata on the human X chromosome
    • LAHN, B. T., and D. C. PAGE, 1999 Four evolutionary strata on the human X chromosome. Science 286: 964-967.
    • (1999) Science , vol.286 , pp. 964-967
    • Lahn, B.T.1    Page, D.C.2
  • 23
    • 0036188821 scopus 로고    scopus 로고
    • Mapping of sex determination loci on the white campion (Silene latifolia) Y chromosome using amplified fragment length polymorphism
    • LEBEL-HARDENACK, S., E. HAUSER, T. F. LAW, J. SCHMID and S. R. GRANT, 2002 Mapping of sex determination loci on the white campion (Silene latifolia) Y chromosome using amplified fragment length polymorphism. Genetics 160: 717-725.
    • (2002) Genetics , vol.160 , pp. 717-725
    • Lebel-Hardenack, S.1    Hauser, E.2    Law, T.F.3    Schmid, J.4    Grant, S.R.5
  • 24
    • 0342723790 scopus 로고    scopus 로고
    • Frequent alternative splicing of human genes
    • MIRONOV, A. A., J. W. FICKETT and M. S. GELFAND, 1999 Frequent alternative splicing of human genes. Genome Res. 9: 1288-1293.
    • (1999) Genome Res , vol.9 , pp. 1288-1293
    • Mironov, A.A.1    Fickett, J.W.2    Gelfand, M.S.3
  • 25
    • 0034964212 scopus 로고    scopus 로고
    • Molecular and evolutionary analysis of a plant Y chromosome
    • MONEGER, F., 2001 Molecular and evolutionary analysis of a plant Y chromosome. CR Acad. Sci. III 324: 531-535.
    • (2001) CR Acad. Sci. III , vol.324 , pp. 531-535
    • Moneger, F.1
  • 26
    • 0036009446 scopus 로고    scopus 로고
    • RAPD isolation of a Y chromosome specific ORF in a dioecious plant, Silene latifolia
    • NAKAO, S., S. MATSUNAGA, A. SAKAI, T. KUROIWA and S. KAWANO, 2002 RAPD isolation of a Y chromosome specific ORF in a dioecious plant, Silene latifolia. Genome 45: 413-420.
    • (2002) Genome , vol.45 , pp. 413-420
    • Nakao, S.1    Matsunaga, S.2    Sakai, A.3    Kuroiwa, T.4    Kawano, S.5
  • 27
    • 0030783255 scopus 로고    scopus 로고
    • The 66-kDa Shc isoform is a negative regulator of the epidermal growth factor-stimulated mitogen-activated protein kinase pathway
    • OKADA, S., A. W. KAO, B. P. CERESA, P. BLAIKIE, B. MARGOLIS et al., 1997 The 66-kDa Shc isoform is a negative regulator of the epidermal growth factor-stimulated mitogen-activated protein kinase pathway. J. Biol. Chem. 272: 28042-28049.
    • (1997) J. Biol. Chem. , vol.272 , pp. 28042-28049
    • Okada, S.1    Kao, A.W.2    Ceresa, B.P.3    Blaikie, P.4    Margolis, B.5
  • 29
    • 0028173774 scopus 로고
    • "RFLP subtraction": A method for making libraries of polymorphic markers
    • ROSENBERG, M., M. PRZYBYLSKA and D. STRAUS, 1994 "RFLP subtraction": a method for making libraries of polymorphic markers. Proc. Natl. Acad. Sci. USA 91: 6113-6117.
    • (1994) Proc. Natl. Acad. Sci. USA , vol.91 , pp. 6113-6117
    • Rosenberg, M.1    Przybylska, M.2    Straus, D.3
  • 30
    • 0031044017 scopus 로고    scopus 로고
    • A short isoform of the human growth hormone receptor functions as a dominant negative inhibitor of the full-length receptor and generates large amounts of binding protein
    • ROSS, R. J., N. ESPOSITO, X. Y. SHEN, S. VON LAUE, S. L. CHEW et al., 1997 A short isoform of the human growth hormone receptor functions as a dominant negative inhibitor of the full-length receptor and generates large amounts of binding protein. Mol. Endocrinol. 11: 265-273.
    • (1997) Mol. Endocrinol. , vol.11 , pp. 265-273
    • Ross, R.J.1    Esposito, N.2    Shen, X.Y.3    Von Laue, S.4    Chew, S.L.5
  • 31
    • 0034913514 scopus 로고    scopus 로고
    • Structure and evolution of the hAT transposon superfamily
    • RUBIN, E., G. LITHWICK and A. A. LEVY, 2001 Structure and evolution of the hAT transposon superfamily. Genetics 158: 949-957.
    • (2001) Genetics , vol.158 , pp. 949-957
    • Rubin, E.1    Lithwick, G.2    Levy, A.A.3
  • 32
    • 0034489841 scopus 로고    scopus 로고
    • Site-specific accumulation of a LINE-like retrotransposon in a sex chromosome of the dioecious plant Cannabis sativa
    • SAKAMOTO, K., N. OHMIDO, K. FUKUI, H. KAMADA and S. SATOH, 2000 Site-specific accumulation of a LINE-like retrotransposon in a sex chromosome of the dioecious plant Cannabis sativa. Plant Mol. Biol. 44: 723-732.
    • (2000) Plant Mol. Biol. , vol.44 , pp. 723-732
    • Sakamoto, K.1    Ohmido, N.2    Fukui, K.3    Kamada, H.4    Satoh, S.5
  • 33
    • 0034019979 scopus 로고    scopus 로고
    • Differentiation and the polymorphic nature of the Y chromosomes revealed by repetitive sequences in the dioecious plant, Rumex acetosa
    • SHIBATA, F., M. HIZUME and Y. KUROKI, 2000 Differentiation and the polymorphic nature of the Y chromosomes revealed by repetitive sequences in the dioecious plant, Rumex acetosa. Chromosome Res. 8: 229-236.
    • (2000) Chromosome Res. , vol.8 , pp. 229-236
    • Shibata, F.1    Hizume, M.2    Kuroki, Y.3
  • 34
    • 0033104331 scopus 로고    scopus 로고
    • Identification of an endogenous dominant-negative short isoform of caspase-9 that can regulate apoptosis
    • SRINIVASUI, A. S. M., M. AHMAD, Y. GUO, Y. ZHAN, Y. LAZEBNIK et al., 1999 Identification of an endogenous dominant-negative short isoform of caspase-9 that can regulate apoptosis. Cancer Res. 59: 999-1002.
    • (1999) Cancer Res. , vol.59 , pp. 999-1002
    • Srinivasui, A.S.M.1    Ahmad, M.2    Guo, Y.3    Zhan, Y.4    Lazebnik, Y.5
  • 35
    • 0025787850 scopus 로고
    • Preferential Y chromosomal location of TRIM, a novel transposable element of Drosophila iranda, obscura group
    • STEINEMANN, M., and S. STEINEMANN, 1991 Preferential Y chromosomal location of TRIM, a novel transposable element of Drosophila iranda, obscura group. Chromosoma 101: 169-179.
    • (1991) Chromosoma , vol.101 , pp. 169-179
    • Steinemann, M.1    Steinemann, S.2
  • 36
    • 0026736836 scopus 로고
    • Degenerating Y chromosome of Drosophila miranda: A trap for retrotransposons
    • STEINEMANN, M., and S. STEINEMANN, 1992 Degenerating Y chromosome of Drosophila miranda: a trap for retrotransposons. Proc. Natl. Acad. Sci. USA 89: 7591-7595.
    • (1992) Proc. Natl. Acad. Sci. USA , vol.89 , pp. 7591-7595
    • Steinemann, M.1    Steinemann, S.2
  • 37
    • 0027316060 scopus 로고
    • A duplication including the Y allele of Lcp2 and the TRIM retrotransposon at the Lcp locus on the degenerating neo-Y chromosome of Drosophila miranda: Molecular structure and mechanisms by which it may have arisen
    • STEINEMANN, M., and S. STEINEMANN, 1993 A duplication including the Y allele of Lcp2 and the TRIM retrotransposon at the Lcp locus on the degenerating neo-Y chromosome of Drosophila miranda: molecular structure and mechanisms by which it may have arisen. Genetics 134: 497-505.
    • (1993) Genetics , vol.134 , pp. 497-505
    • Steinemann, M.1    Steinemann, S.2
  • 38
    • 0031032328 scopus 로고    scopus 로고
    • The enigma of Y chromosome degeneration: TRAM, a novel retrotransposon is preferentially located on the neo-Y chromosome of Drosophila miranda
    • STEINEMANN, M., and S. STEINEMANN, 1997 The enigma of Y chromosome degeneration: TRAM, a novel retrotransposon is preferentially located on the neo-Y chromosome of Drosophila miranda. Genetics 145: 261-266.
    • (1997) Genetics , vol.145 , pp. 261-266
    • Steinemann, M.1    Steinemann, S.2
  • 39
    • 7344224895 scopus 로고    scopus 로고
    • Enigma of Y chromosome degeneration: Neo-Y and neo-X chromosomes of Drosophila miranda, a model for sex chromosome evolution
    • STEINEMANN, M., and S. STEINEMANN, 1998 Enigma of Y chromosome degeneration: neo-Y and neo-X chromosomes of Drosophila miranda, a model for sex chromosome evolution. Genetica 103: 409-420.
    • (1998) Genetica , vol.103 , pp. 409-420
    • Steinemann, M.1    Steinemann, S.2
  • 40
    • 0035106404 scopus 로고    scopus 로고
    • Common mechanisms of Y chromosome evolution
    • STEINEMANN, M., and S. STEINEMANN, 2000 Common mechanisms of Y chromosome evolution. Genetica 109: 105-111.
    • (2000) Genetica , vol.109 , pp. 105-111
    • Steinemann, M.1    Steinemann, S.2
  • 43
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • THOMPSON, J. D., D. G. HIGGINS and T.J. GIBSON, 1994 CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22: 4673-4680.
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 44
    • 0033525845 scopus 로고    scopus 로고
    • Identification of a molecular marker for the Y chromosome of Brugia malayi
    • UNDERWOOD, A. P., and A. E. BLANCO, 1999 Identification of a molecular marker for the Y chromosome of Brugia malayi. Mol. Biochem. Parasitol. 99: 1-10.
    • (1999) Mol. Biochem. Parasitol. , vol.99 , pp. 1-10
    • Underwood, A.P.1    Blanco, A.E.2
  • 45
    • 0000677430 scopus 로고
    • Aberrant Y chromosomes and sex expression in Melandrium album
    • WESTERGAARD, M., 1946 Aberrant Y chromosomes and sex expression in Melandrium album. Hereditas 32: 419-443.
    • (1946) Hereditas , vol.32 , pp. 419-443
    • Westergaard, M.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.