Genetic relationships among native americans based on β-globin gene cluster haplotype frequencies

Genetics and Molecular Biology

Volumn 26, Issue 3, 2003, Pages 229-234

  de Cassia Mousinho Ribeiro, Rita ^a   Pante de Sousa, Gabriella ^a   Melo dos Santos, Eduardo José ^a   Farias Guerreiro, João ^a  

^a FEDERAL UNIVERSITY OF PARÁ   (Brazil)

Author keywords

Brazilian Amerindians; DNA polymorphisms; Genetic diversity

Indexed keywords

BETA GLOBIN;

AMERICAN INDIAN; ARGENTINA; ARTICLE; BRAZIL; COLOMBIA; CONTROLLED STUDY; ETHNIC DIFFERENCE; GENE CLUSTER; GENE FREQUENCY; GENETIC DISTANCE; GENETIC VARIABILITY; HAPLOTYPE; HETEROZYGOSITY; HUMAN; HUMAN CELL; MEXICO; MOLECULAR PHYLOGENY; NATIVE SPECIES; NORTH AMERICA; POPULATION DIFFERENTIATION; SOUTH AMERICA;

INGA;

EID: 0142149017     PISSN: 14154757     EISSN: None     Source Type: Journal    
DOI: 10.1590/s1415-47572003000300002     Document Type: Article

References (46)

1. Antonarakis SE, Kazazian Jr, HH and Orkin SH (1985) DNA polymorphism and molecular pathology of the human -globin gene clusters. Hum Genet 69:1-14.
2. Bevilacqua LRM, Mattevi VS, Ewald GM, Salzano FM, Coimbra Jr CEA, Santos RV and Hutz MH (1995) Beta-globin gene cluster haplotype distribution in five Brazilian Indian tribes. Am J Phys Anthropol 98:395-401.
3. Callegari-Jacques SM and Salzano FM (1999) Brazilian Indian/non-Indian: interactions and their effects. Ciênc e Cult 51:166-174.
4. Castro-de-Guerra D, Hutz MH, Bortolini MC and Salzano FM (1997) Beta-globin gene cluster haplotypes in an admixed Venezuelan population. Am J Hum Biol 9:323-327.
5. Chen LZ, Easteal S, Board PG and Kirk RL (1990) Evolution of beta-globin haplotypes in human populations. Mol Biol Evol 7:423-437.
6. Excoffier L and Slatkin M (1995) Maximum-likelihood estimation of molecular haplotype frequencies in a diploid population. Mol Biol Evol 12:921-927.
7. Hill AVS, Bowden DK, O'Shaughnessy DF, Weatherall DJ and Clegg JB (1988) β-thalassemia in Melanesia: association with malaria and characterization of a common variant (IVS-1 nt 5 G → C ). Blood 72:9-14.
8. Fucharoen G, Fucharoen S, Wilai Y, Chinoluck P, Khunsuk S, Sanchaisuriya K and Sae-Ung N (1997) Beta-globin gene haplotypes in some minor ethnic groups in Thailand. Sout As J Trop Med Publ Health 28:115-119.
9. Guerreiro JF, Figueiredo MS, Santos SEB and Zago MA (1992) β-globin gene cluster haplotypes in Yanomama Indians from the Amazon region of Brazil. Hum Genet 89:629-631.
10. Guerreiro JF, Figueiredo MS and Zago MA (1994) The β-globin gene cluster haplotypes of Amerindian populations from the Brazilian Amazon region. Hum Hered 44:142-149
11. Hewitt R, Krause A, Goldman A, Campbell G and Jenkins T (1996) β-globin haplotype analysis suggests that a major source of Malagasy ancestry is derived from Bantu-speaking Negroids. Am J Hum Genet 58:1303-1308.
12. Horai S, Kondo R, Nakagawa-Hattori Y, Hayashi S, Sonoda S and Tajima K (1993) Peopling of the Americas, founded by four major lineages of mitochondrial DNA. Mol Biol Evol 10:23-47.
13. Hundrieser J, Deka R, Gogoi BC, Papp T and Flatz G (1988a) Haplotypes and frameworks associated with the beta-globin gene in the Kachari population of Assam India. Hum Hered 38:240-245.
14. Hundrieser J, Sanguansermsri T, Papp T, Laig M and Flatz G. (1988b) β-globin gene linked DNA haplotypes and frameworks in three South-East Asian populations. Hum Genet 80:90-94.
15. Kaufman L, Carnese FR, Goicoechea A, Dejean C, Salzano FM and Hutz MH (1998) Beta-globin gene cluster haplotypes in the Mapuche Indians of Argentina. Genet Mol Biol 21:435-437.
16. S-globin gene haplotypes: evidence for an independent Asian origin of the sickle-cell mutation. Am J Hum Genet 39:239-244.
17. Livshits G and Nei M. Relationships between intrapopulational and interpopulational genetic diversity in man (1990) Ann Hum Biol 17:501-513.
18. Long JC, Chakravarti A, Boehm CD, Antonarakis SE and Kazazian Jr HH (1990) Phylogeny of human beta-globin haplotypes and its implications for recent human evolution. Am J Phys Anthropol 81:113-130.
19. thal DNA haplotypes in Sicily. Hum Genet 72:229-230.
20. Mattevi VS, Fiegenbaum M, Salzano FM, Weiss KM, Moore J, Monsalve MV, Devine DV and Hutz MH (2000) Beta-globin gene cluster haplotypes in two North-American indigenous populations. Am J Phys Anthropol 1123:311-317.
21. Nei M (1978) Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics 89:583-590.
22. Nei M and Roychoudhury AK (1993) Evolutionary relationships of human populations on a global scale. Mol Biol Evol 10:927-943
23. Nei M, Tajima F and Tateno Y (1983) Accuracy of estimated phylogenetic trees from molecular data. J Mol Evol 19:153-170.
24. Nei M (1973) Analysis of gene diversity in subdivided populations. Proc Natl Acad Sci USA 70:3321-3323.
25. Neves WA, Prous A, Powell JF and Ozolins EG (1998) Lapa Vermelha IV Hominid I: morphological affinities of the earliest known American. Am J Phys. Anthropol 26(suppl): 169.
26. Oehme R, Kohne E and Horst J (1985) DNA-Polymorphic patterns linked to the β-globin genes in German families affected with hemo-globinopathies and thalassemias: a comparison to other ethnic groups. Hum Genet 71:219-222.
27. Old JM and Higgs DR (1983) Gene analysis. In: D.J. Weatherall (ed) The Thalassemias: Methods in Hematology. Churchill Livingstone, Edinburg, pp 74-102.
28. Ota T (1993) DISPAN: Genetic distance and phylogenetic analysis. University Park, Institute of Molecular Genetics, Pensylvania State University. http://evolution.genetics.washington.edu/phylip/software.dist.html#DISPAN
29. Penaloza R, Garcia-Carranca A, Ceras T, Alvarez C, Berumen J, Zavala C and Salamanca F (1995) Frequency of haplotypes in the beta-globin gene cluster in a selected sample of the Mexican population. Am J Hum Biol 7:45-49.
30. Ramsay M and Jenkins T (1987) Globin gene-associated restriction-fragment-length polymorphisms in Southern African peoples. Am J Hum Genet 41:1132-1144.
31. Saitou N and Nei M (1987) The neighbor-joining method: A new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406-425.
32. Salzano FM and Callegari-Jacques SM (1988) South-American Indians. A case study in evolution. Clarendon Press, Oxford, pp 1-20.
33. Shimizu K (1987) Characteristics of βA chromosome haplotypes in Japanese. Biochem Genet 25:197-203.
34. Shimizu K, Hashimoto T, Harihara S, Tajima K, Sonoda S and Zaninovic V (2000) β-globin gene haplotype characteristics of Colombian Amerindians in South America. Hum Hered 51:54-63.
35. Shimizu K, Park KS, Harihara S and Enoki Y (1992) Relationships between %Hb F or %G gamma and the haplotypes in the beta-globin gene cluster in the normal adult Japanese and Korean populations. Hum Hered 42:216-21
36. Shimizu K, Park KS and Omoto K (1989) The DNA polymorphisms of the β-globin gene cluster and the arrangements of the α-and the γ-globin genes in Koreans. Hemo-globin 13:137-146.
37. Swofford DL and Selander RK (1981) BIOSYS-1: A FORTRAN program for the comprehensive analysis of electrophoretic data in population genetics and systematics. Journal of Heredity 72:281-283.
38. Sutton M, Bouhassira EE and Nagel RL (1989) Polymerase chain reaction amplification applied to the determination of beta-like-globin gene cluster haplotypes. Am J Hematol 32:66-69.
39. Trent RJ, Ferguson V, Hertzberg MS, Rutherford J and Mickleson KNP (1990) β-globin gene haplotypes in Polynesians are predominantly Southern Chinese in type. Hum Hered 40:285-289.
40. Varawalla NY, Fitches AC and Old JM (1992) Analysis of β-globin gene haplotypes in Asian Indians: origin and spread of β-thalassaemia on the Indian subcontinent. Hum Genet 90:443-449.
41. A-globin gene haplotypes in Mexican Huichols: genetic relatedness to other populations. Am J Hum Biol 12:201-206.
42. Vincek V, Bontrop R, O'huigin C and Figueroa F (1994) Polymorphism of the β-globin region in apes: implications for the origin of human haplotypes. Mam Genome 5:376-379.
43. Wainscoat JS, Hill AVS, Boyce AL, Flint J, Hernandez M, Thein SL, Old JM, Lynch JR, Falusi AG, Weatherall DJ and Clegg JB (1986) Evolutionary relationships of human populations from an analysis of nuclear DNA polymorphisms. Nature 319:491-493.
44. Ward RH, Frazier BL, Dew-Jager K and Pääbo S (1991) Extensive mitochondrial diversity within a single Amerindian tribe. Proc Natl Acad Sci USA 88:8720-8724.
45. Yongvanit P, Sriboonlue P, Mularlee N, Karnthong T, Areejitranusorn P, Hundrieser J, Limberg R, Schulze B, Laig M, Flatz SD and Flatz G (1989) DNA haplotypes and frameworks linked to the β-globin locus in an Austro-Asiatic population with a high prevalence of hemo-globin E. Hum Genet 83:171-174.
46. Zago MA, Silva WA, Tavella MH, Santos SEB, Guerreiro JF and Figueiredo MS (1996) Interpopulational and intrapopulational genetic diversity of Amerindians as revealed by six variable number of tandem repeats. Hum Hered 46:274-289.