-
1
-
-
0034730140
-
Singular value decomposition for genome-wide expression data processing and modeling
-
Alter O., Brown P.O., Botstein D., Singular value decomposition for genome-wide expression data processing and modeling. Proc. Natl. Acad. Sci. U.S.A. 97:2000;10101-10106.
-
(2000)
Proc. Natl. Acad. Sci. U.S.A.
, vol.97
, pp. 10101-10106
-
-
Alter, O.1
Brown, P.O.2
Botstein, D.3
-
4
-
-
0032441150
-
Cluster analysis and display of genome-wide expression patterns
-
Eisen M.B., Spellman P.T., Brown P.O., Botstein D., Cluster analysis and display of genome-wide expression patterns. Proc. Natl. Acad. Sci. U.S.A. 95:2000;14863-14868.
-
(2000)
Proc. Natl. Acad. Sci. U.S.A.
, vol.95
, pp. 14863-14868
-
-
Eisen, M.B.1
Spellman, P.T.2
Brown, P.O.3
Botstein, D.4
-
5
-
-
0034568109
-
'Gene shaving' as a method for identifying distinct sets of genes with similar expression patterns
-
research0003.1-0003.21
-
Hastie, T., Tibshirani, R., Eisen, M.B., Alizadeh, A., Levy, R., Staudt, L., Chan, W.C., Botstein, D., Brown, P., 2000. 'Gene shaving' as a method for identifying distinct sets of genes with similar expression patterns. Genome Biol. 1, research0003.1-0003.21.
-
(2000)
Genome Biol.
, vol.1
-
-
Hastie, T.1
Tibshirani, R.2
Eisen, M.B.3
Alizadeh, A.4
Levy, R.5
Staudt, L.6
Chan, W.C.7
Botstein, D.8
Brown, P.9
-
6
-
-
0034682504
-
Fundamental patterns underlying gene expression profiles: Simplicity from complexity
-
Holter N.S., Mitra M., Maritan A., Cieplak M., Banavar J.R., Fedoroff N.V., Fundamental patterns underlying gene expression profiles: simplicity from complexity. Proc. Natl. Acad. Sci. U.S.A. 97:2000;8409-8414.
-
(2000)
Proc. Natl. Acad. Sci. U.S.A.
, vol.97
, pp. 8409-8414
-
-
Holter, N.S.1
Mitra, M.2
Maritan, A.3
Cieplak, M.4
Banavar, J.R.5
Fedoroff, N.V.6
-
7
-
-
0035852785
-
Dynamical modeling of gene expression data
-
Holter N.S., Maritan A., Cieplak M., Fedoroff N.V., Banavar J.R., Dynamical modeling of gene expression data. Proc. Natl. Acad. Sci. U.S.A. 98:2001;1693-1698.
-
(2001)
Proc. Natl. Acad. Sci. U.S.A.
, vol.98
, pp. 1693-1698
-
-
Holter, N.S.1
Maritan, A.2
Cieplak, M.3
Fedoroff, N.V.4
Banavar, J.R.5
-
8
-
-
85194577428
-
Effective dimensionality of expression data from development of rat central nervous system. Recomb 2001, Montreal
-
El-Mabrouk, N., Lengaur, T., Sankoff, D. (Eds.). Les Publications CRM, Montreal
-
Hörnquist, M., Hertz, J., Wahde, M., 2001. Effective dimensionality of expression data from development of rat central nervous system. Recomb 2001, Montreal. In: El-Mabrouk, N., Lengaur, T., Sankoff, D. (Eds.), Currents in Computational Molecular Biology. Les Publications CRM, Montreal, pp. 173-174.
-
(2001)
Currents in Computational Molecular Biology
, pp. 173-174
-
-
Hörnquist, M.1
Hertz, J.2
Wahde, M.3
-
9
-
-
0036271042
-
Effective dimensionality of large-scale expression data using principal component analysis
-
Hörnquist M., Hertz J., Wahde M., Effective dimensionality of large-scale expression data using principal component analysis. BioSystems. 65:2002;147-156.
-
(2002)
BioSystems
, vol.65
, pp. 147-156
-
-
Hörnquist, M.1
Hertz, J.2
Wahde, M.3
-
11
-
-
0036166753
-
Linear modes of gene expression determined by independent component analysis
-
Liebermeister W., Linear modes of gene expression determined by independent component analysis. Bioinformatics. 18:2002;51-60.
-
(2002)
Bioinformatics
, vol.18
, pp. 51-60
-
-
Liebermeister, W.1
-
12
-
-
0000437861
-
Principal components analysis to summarize microarray experiments: Application to sporulation time series
-
Raychaudhuri S., Stuart J.M., Altman R.B., Principal components analysis to summarize microarray experiments: application to sporulation time series. Pacific Symposium on Biocomputing. 5:2000;452-463.
-
(2000)
Pacific Symposium on Biocomputing
, vol.5
, pp. 452-463
-
-
Raychaudhuri, S.1
Stuart, J.M.2
Altman, R.B.3
-
13
-
-
0036739284
-
Geometry of gene expression dynamics
-
Rifkin S.A., Kim J., Geometry of gene expression dynamics. Bioinformatics. 18:2002;1176-1183.
-
(2002)
Bioinformatics
, vol.18
, pp. 1176-1183
-
-
Rifkin, S.A.1
Kim, J.2
-
14
-
-
0033027794
-
Interpreting patterns of gene expression with self-organizing maps: Methods and application to hematopoietic differentiation
-
Tamayo P., Slonim D., Mesirov J., Zhu Q., Kitareewan S., Dmitrovsky E., Lander E.S., Golub T.R., Interpreting patterns of gene expression with self-organizing maps: methods and application to hematopoietic differentiation. Proc. Natl. Acad. Sci. U.S.A. 96:1999;2907-2912.
-
(1999)
Proc. Natl. Acad. Sci. U.S.A.
, vol.96
, pp. 2907-2912
-
-
Tamayo, P.1
Slonim, D.2
Mesirov, J.3
Zhu, Q.4
Kitareewan, S.5
Dmitrovsky, E.6
Lander, E.S.7
Golub, T.R.8
-
15
-
-
0034960264
-
Missing value estimation methods for DNA microarrays
-
Troyanskaya O., Cantor M., Sherlock G., Brown P., Hastie T., Tibshirani R., Botstein D., Altman R.B., Missing value estimation methods for DNA microarrays. Bioinformatics. 17:2001;520-525.
-
(2001)
Bioinformatics
, vol.17
, pp. 520-525
-
-
Troyanskaya, O.1
Cantor, M.2
Sherlock, G.3
Brown, P.4
Hastie, T.5
Tibshirani, R.6
Botstein, D.7
Altman, R.B.8
-
16
-
-
85194575793
-
Microarray analysis techniques: Singular value decomposition and principal component analysis
-
To appear in: Berrar, D.P., Bubitzky, W., Granzow, M. (Eds.). LANL LA-UR-02-4001
-
Wall, M.E., Rechtsteiner, A., Rocha, L.M., 2002. Microarray analysis techniques: singular value decomposition and principal component analysis. To appear in: Berrar, D.P., Bubitzky, W., Granzow, M. (Eds.), Understanding and Using Microarray Analysis Techniques: A Practical Guide. LANL LA-UR-02-4001.
-
(2002)
Understanding and Using Microarray Analysis Techniques: A Practical Guide
-
-
Wall, M.E.1
Rechtsteiner, A.2
Rocha, L.M.3
-
17
-
-
0031915896
-
Large-scale temporal gene expression mapping of central nervous system development
-
Wen X., Fuhrman S., Michaels G.S., Carr D.B., Smith S., Barker J.L., Somogyi R., Large-scale temporal gene expression mapping of central nervous system development. Proc. Natl. Acad. Sci. U.S.A. 95:1998;334-339.
-
(1998)
Proc. Natl. Acad. Sci. U.S.A.
, vol.95
, pp. 334-339
-
-
Wen, X.1
Fuhrman, S.2
Michaels, G.S.3
Carr, D.B.4
Smith, S.5
Barker, J.L.6
Somogyi, R.7
-
18
-
-
0034800371
-
Principal component analysis for clustering gene expression data
-
Yeung K.Y., Ruzzo W.L., Principal component analysis for clustering gene expression data. Bioinformatics. 17:2001;763-774.
-
(2001)
Bioinformatics
, vol.17
, pp. 763-774
-
-
Yeung, K.Y.1
Ruzzo, W.L.2
-
19
-
-
0037197936
-
Reverse engineering gene networks using singular value decomposition and robust regression
-
Yeung M.K.S., Tegnr J., Collins J.J., Reverse engineering gene networks using singular value decomposition and robust regression. Proc. Natl. Acad. Sci. U.S.A. 99:2002;6163-6168.
-
(2002)
Proc. Natl. Acad. Sci. U.S.A.
, vol.99
, pp. 6163-6168
-
-
Yeung, M.K.S.1
Tegnr, J.2
Collins, J.J.3
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