메뉴 건너뛰기




Volumn 62, Issue 4, 2003, Pages 167-174

Combinations of turns in proteins

Author keywords

Combinations of turns; Peptides; Protein structure analysis; Protein structure prediction

Indexed keywords

AMINO ACID; HELIX LOOP HELIX PROTEIN; HYDROLASE; OXIDOREDUCTASE; SERINE PROTEINASE; TRANSFERASE;

EID: 0141727807     PISSN: 1397002X     EISSN: None     Source Type: Journal    
DOI: 10.1034/j.1399-3011.2003.00086.x     Document Type: Article
Times cited : (15)

References (24)
  • 2
    • 0019443447 scopus 로고
    • The anatomy and taxonomy of protein structure
    • Richardson, J.S. (1981) The anatomy and taxonomy of protein structure. Adv. Protein Chem. 34, 167-339.
    • (1981) Adv. Protein Chem. , vol.34 , pp. 167-339
    • Richardson, J.S.1
  • 4
    • 0019326997 scopus 로고
    • Stereochemical requirements for the existence of hydrogen-bonds in beta-bends
    • Nemethy, G. & Scheraga, H.A. (1980) Stereochemical requirements for the existence of hydrogen-bonds in beta-bends. Biochem. Biophys. Res. Commun. 95, 320-327.
    • (1980) Biochem. Biophys. Res. Commun. , vol.95 , pp. 320-327
    • Nemethy, G.1    Scheraga, H.A.2
  • 5
    • 0014347799 scopus 로고
    • Stereochemical criteria for polypeptides and proteins. V. Conformation of a system of three linked peptide units
    • Venkatachalam, C.M. (1968) Stereochemical criteria for polypeptides and proteins. V. Conformation of a system of three linked peptide units. Biopolymers 6, 1425-1436.
    • (1968) Biopolymers , vol.6 , pp. 1425-1436
    • Venkatachalam, C.M.1
  • 6
    • 0028566270 scopus 로고
    • A revised set of potentials for beta-turn formation in proteins
    • Hutchinson, E.G. & Thornton, J.M. (1994) A revised set of potentials for beta-turn formation in proteins. Protein Sci. 3, 2207-2216.
    • (1994) Protein Sci. , vol.3 , pp. 2207-2216
    • Hutchinson, E.G.1    Thornton, J.M.2
  • 7
    • 0019267144 scopus 로고
    • Intramolecularly hydrogen-bonded peptide conformations
    • Toniolo, C. (1980) Intramolecularly hydrogen-bonded peptide conformations. CRC Crit. Rev. Biochem. 9, 1-44.
    • (1980) CRC Crit. Rev. Biochem. , vol.9 , pp. 1-44
    • Toniolo, C.1
  • 8
    • 0024279567 scopus 로고
    • One type of gamma-turn, rather than the other gives rise to chain-reversal in proteins
    • Milner-White, E.J., Ross, B.M., Ismail, R., Belhadj-Mostefa, K. & Poet, R. (1988) One type of gamma-turn, rather than the other gives rise to chain-reversal in proteins. J. Mol. Biol. 204, 777-782.
    • (1988) J. Mol. Biol. , vol.204 , pp. 777-782
    • Milner-White, E.J.1    Ross, B.M.2    Ismail, R.3    Belhadj-Mostefa, K.4    Poet, R.5
  • 9
    • 0024391832 scopus 로고
    • Conformations of beta-hairpins in protein structures. A systematic classification with applications to modeling by homology, electron density fitting and protein engineering
    • Sibanda, B.L., Blundell, T.L. & Thornton, J.M. (1989) Conformations of beta-hairpins in protein structures. A systematic classification with applications to modeling by homology, electron density fitting and protein engineering. J. Mol. Biol. 206, 759-777.
    • (1989) J. Mol. Biol. , vol.206 , pp. 759-777
    • Sibanda, B.L.1    Blundell, T.L.2    Thornton, J.M.3
  • 10
    • 0027339355 scopus 로고
    • Accommodating sequence changes in beta-hairpins in proteins
    • Sibanda, B.L. & Thornton, J.M. (1993) Accommodating sequence changes in beta-hairpins in proteins. J. Mol. Biol. 229, 428-447.
    • (1993) J. Mol. Biol. , vol.229 , pp. 428-447
    • Sibanda, B.L.1    Thornton, J.M.2
  • 11
    • 0020997912 scopus 로고
    • Dictionary of protein secondary structure: Pattern recognition of hydrogen-bonded and geometrical features
    • Kabsch, W. & Sander, C. (1983) Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features. Biopolymers 22, 2577-2637.
    • (1983) Biopolymers , vol.22 , pp. 2577-2637
    • Kabsch, W.1    Sander, C.2
  • 12
    • 0025690309 scopus 로고
    • Situations of gamma-turns in proteins. Their relation to alpha-helices, beta-sheets and ligand binding sites
    • Milner-White, E.J. (1990) Situations of gamma-turns in proteins. Their relation to alpha-helices, beta-sheets and ligand binding sites. J. Mol. Biol. 216, 386-397.
    • (1990) J. Mol. Biol. , vol.216 , pp. 386-397
    • Milner-White, E.J.1
  • 13
    • 0017798828 scopus 로고
    • Prediction of chain turns in globular proteins on a hydrophobic basis
    • Rose, G.D. (1978) Prediction of chain turns in globular proteins on a hydrophobic basis. Nature (London) 272, 586-590.
    • (1978) Nature (London) , vol.272 , pp. 586-590
    • Rose, G.D.1
  • 14
    • 0033752859 scopus 로고    scopus 로고
    • Beta and gamma turns in proteins revisited: A new set of amino acid turn-type dependent positional preferences and potentials
    • Guruprasad, K. & Rajkumar, S. (2000) Beta and gamma turns in proteins revisited: a new set of amino acid turn-type dependent positional preferences and potentials. J. Biosci. 25, 143-156.
    • (2000) J. Biosci. , vol.25 , pp. 143-156
    • Guruprasad, K.1    Rajkumar, S.2
  • 15
    • 0030847766 scopus 로고    scopus 로고
    • Protein Data Bank archives of three-dimensional macromolecular structures
    • Abola, E.E., Sussman, J.L., Prilusky, J. & Manning, N.O. (1997) Protein Data Bank archives of three-dimensional macromolecular structures. Methods Enzymol. 277, 556-571.
    • (1997) Methods Enzymol. , vol.277 , pp. 556-571
    • Abola, E.E.1    Sussman, J.L.2    Prilusky, J.3    Manning, N.O.4
  • 17
    • 0033626521 scopus 로고    scopus 로고
    • Analysis of γβ,βγ,γγ,ββ multiple turns in proteins
    • Guruprasad, K., Prasad, M.S. & Kumar, G.R. (2000) Analysis of γβ,βγ,γγ,ββ multiple turns in proteins. J. Peptide Res. 56, 250-263.
    • (2000) J. Peptide Res. , vol.56 , pp. 250-263
    • Guruprasad, K.1    Prasad, M.S.2    Kumar, G.R.3
  • 18
    • 0034742429 scopus 로고    scopus 로고
    • Analysis of γβ,βγ,γγ,ββ continuous turns in proteins
    • Guruprasad, K., Prasad, M.S. & Kumar, G.R. (2001) Analysis of γβ,βγ,γγ,ββ continuous turns in proteins. J. Peptide Res. 57, 292-300.
    • (2001) J. Peptide Res. , vol.57 , pp. 292-300
    • Guruprasad, K.1    Prasad, M.S.2    Kumar, G.R.3
  • 19
    • 0022565437 scopus 로고
    • Standard conformations of polypeptide chain in irregular regions of proteins
    • Efimov, A.V. (1986) Standard conformations of polypeptide chain in irregular regions of proteins. Mol. Biol. (USSR) 20, 250-260.
    • (1986) Mol. Biol. (USSR) , vol.20 , pp. 250-260
    • Efimov, A.V.1
  • 20
    • 0014381393 scopus 로고
    • Conformation of polypeptides and proteins
    • Ramachandran, G.N. & Sasisekharan, V. (1968) Conformation of polypeptides and proteins. Adv. Prot Chem. 23, 283-438.
    • (1968) Adv. Prot Chem. , vol.23 , pp. 283-438
    • Ramachandran, G.N.1    Sasisekharan, V.2
  • 22
    • 0030039296 scopus 로고    scopus 로고
    • PROMOTIF - A program to identify and analyze structural motifs in proteins
    • Hutchinson, E.G. & Thornton, J.M. (1996) PROMOTIF - a program to identify and analyze structural motifs in proteins. Protein Sci. 5, 212-220.
    • (1996) Protein Sci. , vol.5 , pp. 212-220
    • Hutchinson, E.G.1    Thornton, J.M.2
  • 23
    • 0028205447 scopus 로고
    • Enlarged representative set of protein structures
    • Hobohm, U. & Sander, C. (1994) Enlarged representative set of protein structures. Protein Sci. 3, 522-524.
    • (1994) Protein Sci. , vol.3 , pp. 522-524
    • Hobohm, U.1    Sander, C.2
  • 24
    • 0025104478 scopus 로고
    • Tertiary structural constraints on protein evolutionary diversity: Templates, key residues and structure prediction
    • Overington, J., Johnson, M.S., Sali, A. & Blundell, T.L. (1990) Tertiary structural constraints on protein evolutionary diversity: templates, key residues and structure prediction. Proc. R. Soc. Lond. B Biol. Sci. 241, 132-145.
    • (1990) Proc. R. Soc. Lond. B Biol. Sci. , vol.241 , pp. 132-145
    • Overington, J.1    Johnson, M.S.2    Sali, A.3    Blundell, T.L.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.