Complete sequence of virulence plasmid pJM1 from the marine fish pathogen Vibrio anguillarum strain 775

Journal of Bacteriology

Volumn 185, Issue 19, 2003, Pages 5822-5830

  Di Lorenzo, Manuela ^a   Stork, Michiel ^a   Tolmasky, Marcelo E ^c   Actis, Luis A ^d   Farrell, David ^b   Welch, Timothy J ^e   Crosa, Lidia M ^a   Wertheimer, Anne M ^a,b   Chen, Qian ^f   Salinas, Patricia ^g   Waldbeser, Lillian ^h   Crosa, Jorge H ^a  

^a OREGON HEALTH AND SCIENCE UNIVERSITY   (United States)

^b OREGON HEALTH AND SCIENCE UNIVERSITY   (United States)

^c CALIFORNIA STATE UNIVERSITY   (United States)

^d MIAMI UNIVERSITY   (United States)

^e APPALACHIAN FRUIT RESEARCH STATION   (United States)

^f EISAI RESEARCH INSTITUTE   (United States)

^g IMPERIAL COLLEGE LONDON   (United Kingdom)

^h TEXAS A AND M UNIVERSITY CORPUS CHRISTI   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ABGUIBACTIN; BACTERIAL ENZYME; BENZOIC ACID DERIVATIVE; CYTIDINE; DIHYDROXYBENZOIC ACID; ETHYLENEDIAMINE N,N' BIS(2 HYDROXYPHENYLACETIC ACID); FERRIC ION; GUANINE; IRON CHELATING AGENT; SIDEROPHORE; TRANSFERRIN; UNCLASSIFIED DRUG;

ARTICLE; BACTERIAL GENE; BACTERIAL STRAIN; BACTERIAL VIRULENCE; BASE PAIRING; BIOSYNTHESIS; COMPLEX FORMATION; CONTROLLED STUDY; FISH DISEASE; GENE INSERTION; GENE REPLICATION; IRON TRANSPORT; LISTONELLA ANGUILLARUM; MARINE ENVIRONMENT; NONHUMAN; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; PLASMID; PLASMID PJM1; PRIORITY JOURNAL; PROTEIN FUNCTION; SEPTICEMIA; SEQUENCE ANALYSIS; SEQUENCE HOMOLOGY; TRANSPOSON;

ANIMALS; BACTERIAL PROTEINS; DNA REPLICATION; DNA TRANSPOSABLE ELEMENTS; ECTHYMA, CONTAGIOUS; MOLECULAR SEQUENCE DATA; PEPTIDES; PLASMIDS; SALMONIDAE; SEQUENCE ANALYSIS, DNA; SIDEROPHORES; VIBRIO; VIRULENCE;

BACTERIA (MICROORGANISMS); HESPERIA COMMA BOREALIS; INSERTION SEQUENCES; LISTONELLA ANGUILLARUM; NEGIBACTERIA; PISCES; PROKARYOTA; SALMONIDAE; TRANSPOSONS; UNIDENTIFIED INSERTION SEQUENCE; VIBRIO;

EID: 0141615728     PISSN: 00219193     EISSN: None     Source Type: Journal    
DOI: 10.1128/JB.185.19.5822-5830.2003     Document Type: Article

References (52)

1. Actis, L. A., W . Fish, J. H. Crosa, K. Kellerman, S. R. Ellenberger, F. M. Hauser, and J. Sanders-Loehr. 1986. Characterization of anguibactin, a novel siderophore from Vibrio anguillarum 775(pJM1). J. Bacteriol. 167:57-65.
2. Actis, L. A., S. A. Potter, and J. H. Crosa. 1985. Iron-regulated outer membrane protein OM2 of Vibrio anguillarum is encoded by virulence plasmid pJM1. J. Bacteriol. 161:736-742.
3. Actis, L. A., M. E. Tolmasky, and J. H. Crosa. 1999. Vibriosis, p. 523-557. In P. Woo and D. Bruno (ed.), Fish diseases and disorders. Viral, bacterial, and fungal infections, vol. 3. CAB International Publishing, Wallingford, United Kingdom.
4. Actis, L. A., M. E. Tolmasky, L. M. Crosa, and J. H. Crosa. 1995. Characterization and regulation of the expression of FatB, an iron transport protein encoded by the pJM1 virulence plasmid. Mol. Microbiol. 17:197-204.
5. Actis, L. A., M. E. Tolmasky, D. H. Farrell, and J. H. Crosa. 1988. Genetic and molecular characterization of essential components of the Vibrio anguillarum plasmid-mediated iron-transport system. J. Biol. Chem. 263:2853-2860.
6. Altschul, S. F., W. Gish, W. Miller, E. W. Myers, and D. J. Lipman. 1990. Basic local alignment search tool. J. Mol. Biol. 215:403-410.
7. Becker, K., W. Koster, and V. Braun. 1990. Iron(III) hydroxamate transport of Escherichia coli K12: single amino acid replacements at potential ATP-binding sites inactivate the FhuC protein. Mol. Gen. Genet. 223:159-162.
8. Berg, D. E. 1989. Transposon Tn5, p. 185-210. In D. E. Berg and M. M. Howe (ed.), Mobile DNA. American Society for Microbiology, Washington, D.C.
9. Borodovsky M., and J. McIninch. 1993. GeneMark: parallel gene recognition for both DNA strands. Comput. Chem. 17:123-133.
10. Chen, Q. 1995. Ph.D. thesis. Oregon Health and Science University, Portland.
11. Chen, Q., L. A. Actis, M. E. Tolmasky, and J. H. Crosa. 1994. Chromosome-mediated 2,3-dihydroxybenzoic acid is a precursor in the biosynthesis of the plasmid-mediated siderophore anguibactin in Vibrio anguillarum. J. Bacteriol. 176:4226-4234.
12. Chen, Q., and J. H. Crosa. 1996. Antisense RNA,fur, iron, and the regulation of iron transport genes in Vibio anguillarum. J. Biol. Chem. 271:18885-18891.
13. Chen, Q., A. M. Wertheimer, M. E. Tolwasky, and J. H. Crosa. 1996. The AngR protein and the siderophore anguibactin positively regulate the expression of iron-transport genes in Vibrio anguillarum. Mol. Microbiol. 22:127-134.
14. Craig, N. L. 1989. Transposon Tn7, p. 211-225. In D. E. Berg and M. M. Howe (ed.), Mobile DNA. American Society for Microbiology, Washington, D.C.
15. Crosa, J. H. 1980. A plasmid associated with virulence in the marine fish pathogen Vibrio anguillarum specifies an iron-sequestering system. Nature 284:566-568.
16. Crosa, J. H. 1997. Signal transduction and transcriptional and posttranscriptional control of iron-regulated genes in bacteria. Microbiol. Mol. Biol. Rev. 61:319-336.
17. Crosa, J. H., and C. T. Walsh. 2002. Genetics and assembly line enzymology of siderophore biosynthesis in bacteria. Microbiol. Mol. Biol. Rev. 66:223-249.
18. Farrell, D. H., P. Mikesell, L. A. Actis, and J. H. Crosa. 1990. A regulatory gene, angR, of the iron uptake system of Vibrio anguillarum: similarity with phage P22 cro and regulation by iron. Gene 86:45-51.
19. Gerdes, K., J. Moller-Jensen, and R. Bugge Jensen. 2000. Plasmid and chromosome partitioning: surprises from phylogeny. Mol. Microbiol. 37:455-466.
20. Holmstrom, K., and L. Gram. 2003. Elucidation of the Vibrio anguillarum genetic response to the potential fish probiont Pseudomonas fluorescens AH2, using RNA-arbitrarily primed PCR. J. Bacteriol. 185:831-842.
21. Horng, Y. T., S. C. Deng, M. Daykin, P. C. Soo, J. R. Wei, K. T. Luh, S. W. Ho, S. Swift, H. C. Lai, and P. Williams. 2002. The LuxR family protein SpnR functions as a negative regulator of N-acylhomoserine lactone-dependent quorum sensing in Serratia marcescens. Mol. Microbiol. 45:1655-1671.
22. Jatal, M., D. Hossain, D. van der Hetm, J. Sanders-Loehr, L. A. Actis, and J. H. Crosa. 1989. Structure of anguibactin, a unique plasmid-related bacterial siderophore from the fish pathogen Vibrio anguillarum. J. Am. Chem. Soc. 111:292-296.
23. Kleckner, N. 1989. Transposon TN10, p. 227-268. In D. E. Berg and M. M. Howe (ed.), Mobile DNA. American Society for Microbiology, Washington, D.C.
24. Koster, W. 1991. Iron(III) hydroxamate transport across the cytoplasmic membrane of Escherichia coli. Biol. Met. 4:23-32.
25. Koster, W., and V. Braun. 1990. Iron (III) hydroxamate transport into Escherichia coli. Substrate binding to the periplasmic FhuD protein. J. Biol. Chem. 265:21407-21410.
26. Koster, W. L., L. A. Actis, L. S. Waldbeser, M. E. Tolmasky, and J. H. Crosa. 1991. Molecular characterization of the iron transport system mediated by the PJM1 plasmid in Vibrio anguillarum 775. J. Biol. Chem. 266:23829-23833.
27. Kwong, S. M., C. C. Yeo, and C. L. Poh. 2001. Molecular analysis of the pRA2 partitioning region: ParB autoregulates parAB transcription and forms a nucleoprotein complex with the plasmid partition site, parS. Mol. Microbiol. 40:621-633.
28. L'Abee-Lund, T. M., and H. Sorum. 2002. A global non-conjugative Tet C plasmid, pRAS3, from Aeromonas salmonicida. Plasmid 47:172-181.
29. Lin, D. C., and A. D. Grossman. 1998. Identification and characterization of a bacterial chromosome partitioning site. Cell 92:675-685.
30. Olsen, J. E., and J. L. Larsen. 1990. Restriction fragment length polymorphism of the Vibrio anguillarum serovar O1 virulence plasmid. Appl. Environ. Microbiol. 56:3130-3132.
31. Ozenberger, B. A., M. S. Nahlik, and M. A. McIntosh. 1987. Genetic organization of multiple fep genes encoding ferric enterobactin transport functions in Escherichia coli. J. Bacteriol. 169:3638-3646.
32. Pedersen, K., T. Tiainen, and J. L. Larsen. 1996. Plasmid profiles, restriction fragment length polymorphisms and O-serotypes among Vibrio anguillarum isolates. Epidemiol. Infect. 117:471-478.
33. Picardeau, M., J. R. Lobry, and B. J. Hinnebusch. 2000. Analyzing DNA strand compositional asymmetry to identify candidate replication origins of Borrelia burgdorferi linear and circular plasmids. Genome Res. 10:1594-1604.
34. Salinas, P. C., and J. H. Crosa. 1995. Regulation of angR, a gene with regulatory and biosynthetic functions in the pJM1 plasmid-mediated iron uptake system of Vibrio anguillarum. Gene 160:17-23.
35. Salinas, P. C., L. S. Waldbeser, and J. H. Crosa. 1993. Regulation of the expression of bacterial iron transport genes: possible role of an antisense RNA asa repressor. Gene 123:33-38.
36. Schiewe, M. H., J. H. Crosa, and E. J. Ordal. 1977. Deoxyribonucleic acid relationships among marine vibrios pathogenic to fish. Can. J. Microbiol. 23:954-958.
37. Stephens, D. L., M. D. Choe, and C. F. Earhart. 1995. Escherichia coli periplasmic protein FepB binds ferrienterobactin. Microbiology 141:1647-1654.
38. Stohl, E. A., J. P. Brockman, K. L. Burkle, K. Morimatsu, S. C. Kowalczykowski, and H. S. Seifert. 2003. Escherichia coli RecX inhibits RecA recombinase and coprotease activities in vitro and in vivo. J. Biol. Chem. 278:2278-2285.
39. Stork, M., M. Di Lorenzo, T. J. Welch, L. M. Crosa, and J. H. Crosa. 2002. Plasmid-mediated iron uptake and virulence in Vibrio anguillarum. Plasmid 48:222-228.
40. Tolmasky, M. E., L. A. Actis, and J. H. Crosa. 1988. Genetic analysis of the iron uptake region of the Vibrio anguillarum plasmid pJM1: molecular cloning of genetic determinants encoding a novel trans activator of siderophore biosynthesis. J. Bacteriol. 170:1913-1919.
41. Tolmasky, M. E., L. A. Actis, and J. H. Crosa. 1995. A histidine decarboxylase gene encoded by the Vibrio anguillarum plasmid pJM1 is essential for virulence: histamine is a precursor in the biosynthesis of anguibactin. Mol. Microbiol. 15:87-95.
42. Tolmasky, M. E., L. A. Actis, and J. H. Crosa. 1993. A single amino acid change in AngR, a protein encoded by pJM1-like virulence plasmids, results in hyperproduction of anguibactin. Infect. Immun. 61:3228-3233.
43. Tolmasky, M. E., L. A. Actis, A. E. Toranzo, J. L. Barja, and J. H. Crosa. 1985. Plasmids mediating iron uptake in Vibrio anguillarum strains isolated from turbot in Spain. J. Gen. Microbiol. 131:1989-1997.
44. Tolmasky, M. E., and J. H. Crosa. 1995. Iron transport genes of the pJM1-mediated iron uptake system of Vibrio anguillarum are included in a transposonlike structure, Plasmid 33:180-190.
45. Tolmasky, M. E., and J. H. Crosa. 1984. Molecular cloning and expression of genetic determinants for the iron uptake system mediated by the Vibrio anguillarum plasmid pJM1. J. Bacteriol. 160:860-866.
46. Tolmasky, M. E., P. C. Salinas, L A. Actis, and J. H. Crosa. 1988. Increased production of the siderophore anguibactin mediated by pJM1-like plasmids in Vibrio anguillarum. Infect. Immun. 56:1608-1614.
47. Waldbeser, L. S., Q. Chen, and J. H. Crosa. 1995. Antisense RNA regulation of the fatB iron transport protein gene in Vibrio anguillarum. Mol. Microbiol. 17:747-756.
48. Waldbeser, L. S., M. E. Tolmasky, L. A. Actis, and J. H. Crosa, 1993. Mechanisms for negative regulation by iron of the fatA outer membrane protein gene expression in Vibrio anguillarum 775. J. Biol. Chem. 268:10433-10439.
49. Waters, V. L., and J. H. Crosa. 1991. Colicin V virulence plasmids. Microbiol. Rev. 55:437-450.
50. Welch, T. J., S. Chai, and J. H. Crosa. 2000. The overlapping angB and angG genes are encoded within the trans-acting factor region of the virulence plasmid in Vibrio anguillarum: essential essential role in siderophore biosynthesis. J. Bacteriol. 182:6762-6773.
51. Wertheimer, A. M., W. Verweij, Q. Chen, L. M. Crosa, M. Nagasawa, M. E. Tolmasky, L A. Actis, and J. H. Crosa. 1999. Characterization of the angR gene of Vibrio anguillarum: essential role in virulence. Infect. Immun. 67:6496-6509.
52. Wyckoff, E. E., J. A. Stoebner, K. E. Reed, and S. M. Payne. 1997. Cloning of a Vibrio cholerae vibriobactin gene cluster: identification of genes required for early steps in siderophore biosynthesis. J. Bacteriol. 179:7055-7062.