Identification and molecular characterization of mitochondrial ferredoxins and ferredoxin reductase from Arabidopsis

Plant Molecular Biology

Volumn 52, Issue 4, 2003, Pages 817-830

  Takubo, Keiko ^a   Morikawa, Tomomi ^a   Nonaka, Yasuki ^b   Mizutani, Masaharu ^c   Takenaka, Shigeo ^a   Takabe, Keiji ^c   Takahashi, Masa Aki ^a   Ohta, Daisaku ^a  

^a Osaka Prefecture University   (Japan)

^b KOSHIEN UNIVERSITY   (Japan)

^c KYOTO UNIVERSITY   (Japan)

Author keywords

Arabidopsis; Ferredoxin; Ferredoxin reductase; Mitochondria

Indexed keywords

CELL MEMBRANES; DNA; ESCHERICHIA COLI; GENES; PLANTS (BOTANY);

CYTOCHROMES;

PROTEINS;

AMINO ACID SEQUENCE; ANIMALS; ARABIDOPSIS; ARABIDOPSIS PROTEINS; CELL LINE; CLONING, MOLECULAR; DNA, COMPLEMENTARY; ELECTROPHORESIS, POLYACRYLAMIDE GEL; FERREDOXIN-NADP REDUCTASE; FERREDOXINS; GENE EXPRESSION; GENE EXPRESSION REGULATION, PLANT; GREEN FLUORESCENT PROTEINS; LUMINESCENT PROTEINS; MICROSCOPY, FLUORESCENCE; MITOCHONDRIAL PROTEINS; MOLECULAR SEQUENCE DATA; ONIONS; PHYLOGENY; PLANT EPIDERMIS; RECOMBINANT PROTEINS; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY, AMINO ACID; SPODOPTERA;

ARABIDOPSIS; EMBRYOPHYTA; ESCHERICHIA COLI; INSECTA;

EID: 0043262900     PISSN: 01674412     EISSN: None     Source Type: Journal    
DOI: 10.1023/A:1025015811141     Document Type: Article

References (44)

1. + reductases: a basal structural framework and a multiplicity of functions. FASEB J. 11: 133-140.
2. Barros, M.H. and Nobrega, F.G. 1999. YAH1 of Saccharomyces cerevisiae: a new essential gene that codes for a protein homologous to human adrenodoxin. Gene 233: 197-203.
3. Barros, M.H., Nobrega, F.G. and Tzagoloff, A. 2002. Mitochondrial ferredoxin is required for heme A synthesis in Saccharomyces cerevisiae. J. Biol. Chem. 277: 9997-10002.
4. Chiu, W., Niwa, Zeng, YW., Hirano, T., Kobayashi, H. and Sheen, J. 1996. Engineered GFP as a vital reporter in plants. Curr. Biol. 6: 325-330.
5. Chu, J.W. and Kimura, T. 1973. Studies on adrenal steroid hydroxylases. Molecular and catalytic properties of adrenodoxin reductase (a flavoprotein). J. Biol. Chem. 248: 2089-2094.
6. Felsenstein, J. 1996. Inferring phylogenies from protein sequences by parsimony, distance, and likelihood methods. Meth. Enzymol. 266: 418-427.
7. Fujimori, K. and Ohta, D. 1998. Isolation and characterization of a histidine biosynthetic gene in Arabidopsis encoding a polypeptide with two separate domains for phosphoribosyl-ATP pyrophosphohydrolase and phosphoribosyl-AMP cyclohydrolase. Plant Physiol. 118: 275-283.
8. Fukuchi-Mizutani, M., Mizutani, M., Tanaka, Y., Kusumi, T. and Ohta, D. 1999. Microsomal electron transfer in higher plants: cloning and heterologous expression of NADH-cytochrome b5 reductase from Arabidopsis. Plant Physiol. 119: 353-362.
9. Glaser, E., Sjoling, S., Tanudji, M. and Whelan, J. 1998. Mitochondrial protein import in plants. Signals, sorting, targeting, processing and regulation. Plant Mol. Biol. 38: 311-338.
10. Grinberg, A.V., Hannemann, F., Schiffler, B., Müller, J., Heinemann, U. and Bernhardt, R. 2000. Adrenodoxin: structure, stability, and electron transfer properties. Proteins 40: 590-612.
11. Huang, J.J. and Kimura, T. 1973. Studies on adrenal hydroxylases. Oxidation-reduction properties of adrenal iron-sulfur protein (adrenodoxin). Biochemistry 12: 406-409.
12. Kagimoto, M., Kagimoto, K., Simpson, E.R., and Waterman, M.R. 1988. Transcription of the bovine adrenodoxin gene produces two species of mRNA of which only one is translated into adrenodoxin. J. Biol. Chem. 263: 8925-8928.
13. Klein, M., Binder, S. and Brennicke. A. 1998. Preparation of mitochondria from Arabidopsis. In: J.M. Martínez-Zapater and J. Salinas (Eds.) Arabidopsis Protocols, Humana Press, Totowa, NJ, pp. 49-53.
14. Koyama, H., Takita, E., Kawamura, A., Hara, T. and Shibata, D. 1999. Over expression of mitochondiral citrate synthase gene improves the growth of carrot cells in Al-phosphate medium. Plant Cell Physiol. 40: 482-488.
15. Krömer, S. and Heldt, H.W. 1991. Respiration of pea leaf mitochondria and redox transfer between the mitochondrial and extramitochondrial compartment. Biochim. Biophys. Acta 1057: 42-50.
16. Kruft, V., Eubel, H., Jänsch, L., Werhahn, W. and Braun, H.-P. 2001. Proteomic approach to identify novel mitochondrial proteins in Arabidopsis. Plant Physiol. 127: 1694-1710.
17. Kunst, L. 1998. Preparation of physiologically active chloroplasts from Arabidopsis. In: J.M. Martínez-Zapater and J. Salinas (Eds.) Arabidopsis Protocols. Humana Press, Totowa, NJ, pp. 43-48.
18. Kushnir, S., Babiychuk, E., Storozhenko, S., Davey, M., Papenbrock, J., De Rycke, R. R., Engler, G., Stephan, U., Lange, H., Kispal, G., Lill, R. and Van Montagu, M. 2001. A mutation of the mitochondrial ABC transporter Stal leads to dwarfism and chlorosis in the Arabidopsis mutant starik. Plant Cell 13: 89-100.
19. Lacour, T., Achstetter, T. and Dumas, B. 1998 Characterization of recombinant adrenodoxin reductase homologue (Arh1p) from yeast. Implication in in vitro cytochrome p45011β monooxygenase system. J. Biol. Chem. 273: 23984-23992.
20. Laemmli, U.K. 1970. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227: 680-685.
21. Lange, H., Kaut, A., Kispal, G. and Lill, R. 2000. A mitochondrial ferredoxin is essential for biogenesis of cellular iron-sulfur proteins. Proc. Natl. Acad. Sci. USA. 97: 1050-1055.
22. Léon, S., Touraine, B., Briat, J.-F. and Lobréaux, S. 2002. The AtNFS2 gene from Arabidopsis thaliana encodes a NifS-like plastidal cysteine desulphurase. Biochem. J. 366: 557-564.
23. Li, J., Saxena, S., Pain, D. and Dancis, A. 2001. Adrenodoxin reductase homolog (Arh1p) of yeast mitochondria required for iron homeostasis. J. Biol. Chem. 276: 1503-1509.
24. Lill, R. and Kispal, G. 2000. Maturation of cellular Fe-S proteins: an essential function of mitochondria. Trends Biochem. Sci. 25: 352-356.
25. Manzella, L., Barros, M.H. and Nobrega, F.G. 1998. ARH1 of Saccharomyces cerevisiae: a new essential gene that codes for a protein homologous to the human adrenodoxin reductase. Yeast 14: 839-846.
26. Millar, A.H., Sweetlove, L.J., Giegé, P. and Leaver, C.J. 2001. Analysis of the Arabidopsis mitochondrial proteome. Plant Physiol. 127: 1711-1727.
27. Mizutani, M., Ohta, D. and Sato, R. 1997. Isolation of a cDNA and a genomic clone encoding cinnamate 4-hydroxylase from Arabidopsis and its expression manner in planta. Plant Physiol. 113: 755-763.
28. Mizutani, M. and Ohta, D. 1998. Two isoforms of NADPH:cytochrome P450 reductase in Arabidopsis thaliana. Gene structure, heterologous expression in insect cells, and differential 28 regulation. Plant Physiol. 116: 357-367.
29. Mühlenhoff, U. and Lill, R. 2000. Biogenesis of iron-sulfur proteins in eukaryotes: a novel task of mltochondria that is inherited from bacteria. Biochim. Biophys. Acta 1459: 370-382.
30. Müller, J.J., Lapko, A., Bourenkov, G., Ruckpaul, K. and Heinemann, U. 2001. Adrenodoxin reductase-adrenodoxin complex structure suggests electron transfer path in steroid biosynthesis. J. Biol. Chem. 276: 2786-2789.
31. Nairn, C.J., Winesett, L. and Ferl, R.J. 1988. Nucleotide sequence of an actin gene from Arabidopsis thaliana. Gene 65: 247-257.
32. Neuberger, M., Journet, E.-P., Bligny, R., Carde, J.P. and Douce, R. 1982 Purification of plant mitochondria by isopycnic centrifugation in density gradients of Percoll. Arch. Biochem. Biophys. 217: 312-323.
33. Nonaka, Y., Murakami, H., Yabusaki, Y., Kuramitsu, S., Kagamiyama, H., Yamano, T. and Okamoto, M. 1987. Molecular cloning and sequence analysis of full-length cDNA for mRNA of adrenodoxin oxidoreductase from bovine adrenal cortex. Biochem. Biophys. Res. Commun, 145: 1239-1247.
34. Nonaka, Y., Fujii, T., Kagawa, Y., Waterman, M.R., Takemori, H. and Okamoto, M. 1998. Structure/function releationship of CYP11B1 assocated with Dahl's salt-resistant rats Expression of rat CYP11B1 and CYP11B2 in Escherichia coli. Eur. J. Biochem. 258: 869-878.
35. Shimada, H., Nagano, S., Hori, H. and Ishimura, Y. 2001. Putidaredoxin-cytochrome P450cam interaction. J. Inorg. Biochem. 83: 255-260.
36. Takahashi, Y. and Nakamura, M. 1999. Functional assignment of the ORF2-iscS-iscU-iscA-hscB-hscA-fdx-ORF3 gene cluster involved in the assembly of Fe-S clusters in Escherichia coli. J. Biochem. 126: 917-926.
37. Thompson, J.D., Higgins, D.G. and Gibson, T.J. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucl. Acids. Res. 22: 4673-4680.
38. Tong, W.H. and Rouault, T. 2000. Distinct iron-sulfur cluster assembly complexes exist in the cytosol and mitochondria of human cells. EMBO J. 21: 5692-5700.
39. Urban, P., Mignotte, C., Kazmaier, M., Delorme, F. and Pompon, D. 1997. Cloning, yeast expression, and characterization of the coupling of two distantly related Arabidopsis thaliana NADPH-cytochrome P450 reductases with P450 CYP73A5. J. Biol. Chem. 272: 19176-19186.
40. Vickery, L.E. 1997. Molecular recognition and electron transfer in the mitochonddal steroid hydroxylase system. Steroids 62: 124-127.
41. Walker, D.A. 1980. Preparation of higher plant chloroplasts. Meth. Enzymol. 69: 94-104.
42. Xia, B., Cheng, H., Bandarian, V., Reed, G.H. and Markley, J.L. 1996. Human ferredoxin: overproduction in Escherichia coli, reconstitution in vitro, and spectroscopic studies of iron-sulfur cluster ligand cysteine-to-serine mutants. Biochemistry 35: 9488-9495.
43. Ziegler, G.A., Vonrhein, C., Hanukoglu, I. and Schulz, G.E. 1999. The structure of adrenodoxin reductase of mitochondrial P450 systems: electron transfer for steroid biosynthesis. J. Mol. Biol. 289: 981-990.
44. + and NADPH suggesting a mechanism for the electron transfer of an enzyme family. Biochemistry 39: 10986-10995.