메뉴 건너뛰기




Volumn 373, Issue 3, 2003, Pages 875-883

Structural and thermal stability analysis of Escherichia coli and Alicyclobacillus acidocaldarius thioredoxin revealed a molten globule-like state in thermal denaturation pathway of the proteins: An infrared spectroscopic study

Author keywords

Fourier transform IR (FTIR) spectroscopy; Molten globule like state; Protein aggregation; Thermostability; Thioredoxin; Two dimensional IR correlation analysis

Indexed keywords

ESCHERICHIA COLI; FOURIER TRANSFORM INFRARED SPECTROSCOPY; MOLECULAR STRUCTURE; PROTEINS; THERMODYNAMIC STABILITY;

EID: 0043069834     PISSN: 02646021     EISSN: None     Source Type: Journal    
DOI: 10.1042/BJ20021747     Document Type: Article
Times cited : (38)

References (36)
  • 1
    • 0025883245 scopus 로고
    • Structural and functional relations among thioredoxins of different species
    • Eklund, H., Gleason, F. K. and Holmgren, A. (1991) Structural and functional relations among thioredoxins of different species. Proteins: Struct., Funct., Genet. 11, 13-28
    • (1991) Proteins: Struct., Funct., Genet. , vol.11 , pp. 13-28
    • Eklund, H.1    Gleason, F.K.2    Holmgren, A.3
  • 2
    • 0028171569 scopus 로고
    • Thioredoxin: A multifunctional regulatory protein with a bright future in technology and medicine
    • Buchanan, B. B., Schurmann, P., Decottignies, P. and Lozano, R. M. (1994) Thioredoxin: a multifunctional regulatory protein with a bright future in technology and medicine. Arch Biochem. Biophys. 314, 257-260
    • (1994) Arch Biochem. Biophys. , vol.314 , pp. 257-260
    • Buchanan, B.B.1    Schurmann, P.2    Decottignies, P.3    Lozano, R.M.4
  • 3
    • 14744292185 scopus 로고
    • A thioredoxin gene fusion expression system that circumvents inclusion body formation in the E. coli cytoplasm
    • LaVallie, E. R., Di Blasio, E. A., Kovacic, S., Grant, K. L., Schendel, P. F. and McCoy, J. M. (1993) A thioredoxin gene fusion expression system that circumvents inclusion body formation in the E. coli cytoplasm Bio/Technology 11, 187-193
    • (1993) Bio/Technology , vol.11 , pp. 187-193
    • LaVallie, E.R.1    Di Blasio, E.A.2    Kovacic, S.3    Grant, K.L.4    Schendel, P.F.5    McCoy, J.M.6
  • 4
    • 0028793115 scopus 로고
    • Increase of solubility of foreign proteins in Escherichia coli by coproduction of the bacterial thioredoxin
    • Yasukawa, T., Kanei-Ishii, C., Maekawa, T., Fujimoto, J., Yamamoto, T. and Ishii, S. (1995) Increase of solubility of foreign proteins in Escherichia coli by coproduction of the bacterial thioredoxin. J. Biol. Chem. 270, 25328-25331
    • (1995) J. Biol. Chem. , vol.270 , pp. 25328-25331
    • Yasukawa, T.1    Kanei-Ishii, C.2    Maekawa, T.3    Fujimoto, J.4    Yamamoto, T.5    Ishii, S.6
  • 6
    • 0031758540 scopus 로고    scopus 로고
    • Computational analysis of the thermal stability in thioredoxins: A molecular dynamics approach
    • Pedone, E., Bartolucci, S., Rossi, M. and Saviano, M. (1998) Computational analysis of the thermal stability in thioredoxins: a molecular dynamics approach. J. Biomol. Struct. Dyn. 16, 437-446
    • (1998) J. Biomol. Struct. Dyn. , vol.16 , pp. 437-446
    • Pedone, E.1    Bartolucci, S.2    Rossi, M.3    Saviano, M.4
  • 7
    • 0033561065 scopus 로고    scopus 로고
    • Prediction and experimental testing of Bacillus acidocaldarius thioredoxin stability
    • Pedone, E., Cannio, R., Saviano, M. Rossi, M. and Bartolucci, S. (1999) Prediction and experimental testing of Bacillus acidocaldarius thioredoxin stability. Biochem. J. 15, 309-317
    • (1999) Biochem. J. , vol.15 , pp. 309-317
    • Pedone, E.1    Cannio, R.2    Saviano, M.3    Rossi, M.4    Bartolucci, S.5
  • 8
    • 0034961587 scopus 로고    scopus 로고
    • A single point mutation (Glu85Arg) increases the stability of the thioredoxin from Escherichia coli
    • Pedone, E., Saviano, M., Rossi, M. and Bartolucci, S. (2001) A single point mutation (Glu85Arg) increases the stability of the thioredoxin from Escherichia coli. Protein Eng. 14, 255-260
    • (2001) Protein Eng. , vol.14 , pp. 255-260
    • Pedone, E.1    Saviano, M.2    Rossi, M.3    Bartolucci, S.4
  • 9
    • 0027240609 scopus 로고
    • Stability of oxidized Eseherichia coli thioredoxin and its dependence on protonation of the aspartic acid residue in the 26 position
    • Ladbury, J. E., Wynn, R., Homme, W., Hellinga, H. W., Julian, M. and Sturtevant, J. M. (1993) Stability of oxidized Eseherichia coli thioredoxin and its dependence on protonation of the aspartic acid residue in the 26 position. Biochemistry 32, 7526-7530
    • (1993) Biochemistry , vol.32 , pp. 7526-7530
    • Ladbury, J.E.1    Wynn, R.2    Homme, W.3    Hellinga, H.W.4    Julian, M.5    Sturtevant, J.M.6
  • 10
    • 0033579918 scopus 로고    scopus 로고
    • Thermal denaturation of Escherichia coli thioredoxin studied by hydrogen/deuterium exchange and electrospray ionization masis spectrometry: Monitoring a two-state protein unfolding transition
    • Maier, C. S., Schimerlik, M. I. and Deinzer, M. L. (1999) Thermal denaturation of Escherichia coli thioredoxin studied by hydrogen/deuterium exchange and electrospray ionization masis spectrometry: monitoring a two-state protein unfolding transition. Biochemistry 38, 1136-1143
    • (1999) Biochemistry , vol.38 , pp. 1136-1143
    • Maier, C.S.1    Schimerlik, M.I.2    Deinzer, M.L.3
  • 11
    • 0342862068 scopus 로고
    • Solvent deuterium isotope effects on acid-base equilibria
    • Salomaa, P., Schaleger, L. L. and Long, F. A. (1964) Solvent deuterium isotope effects on acid-base equilibria. J. Am. Chem. Soc. 88, 1-7
    • (1964) J. Am. Chem. Soc. , vol.88 , pp. 1-7
    • Salomaa, P.1    Schaleger, L.L.2    Long, F.A.3
  • 12
    • 0032932846 scopus 로고    scopus 로고
    • Porcine odorant-binding protein: Structural stability and ligand affinities measured by Fourier transform infrared spectroscopy and fluorescence spectroscopy
    • Paolini, S., Tanfani, F., Fini, C., Bertoli, E. and Pelosi, P. (1999) Porcine odorant-binding protein: structural stability and ligand affinities measured by Fourier transform infrared spectroscopy and fluorescence spectroscopy. Biochim. Biophys. Acta 1431, 179-188
    • (1999) Biochim. Biophys. Acta , vol.1431 , pp. 179-188
    • Paolini, S.1    Tanfani, F.2    Fini, C.3    Bertoli, E.4    Pelosi, P.5
  • 13
    • 33745563365 scopus 로고
    • Generalized two-dimensional correlation method applicable to infrared, raman and other types of spectroscopy
    • Noda, I. (1993) Generalized two-dimensional correlation method applicable to infrared, raman and other types of spectroscopy. Appl. Spectrosc. 47, 1329-1336
    • (1993) Appl. Spectrosc. , vol.47 , pp. 1329-1336
    • Noda, I.1
  • 14
    • 0037899438 scopus 로고    scopus 로고
    • A new possibility of the generalized two-dimensional correlation spectroscopy. 1. Sample-sample correlation spectroscopy
    • Sasic, S., Muszynski, A. and Ozaki, Y. (2000) A new possibility of the generalized two-dimensional correlation spectroscopy. 1. sample-sample correlation spectroscopy. J. Phys Chem. A 104, 6380-6387
    • (2000) J. Phys Chem. A , vol.104 , pp. 6380-6387
    • Sasic, S.1    Muszynski, A.2    Ozaki, Y.3
  • 15
    • 0033539558 scopus 로고    scopus 로고
    • Two-dimensional IR correlation spectroscopy: Sequential events in the unfolding process of the λ Cro-V55C repressor protein
    • Fabian, H., Mantsch, H. H. and Schultz, C. P. (1999) Two-dimensional IR correlation spectroscopy: Sequential events in the unfolding process of the λ Cro-V55C repressor protein. Proc Natl. Acad. Sci. U.S.A. 96, 13153-13158
    • (1999) Proc Natl. Acad. Sci. U.S.A. , vol.96 , pp. 13153-13158
    • Fabian, H.1    Mantsch, H.H.2    Schultz, C.P.3
  • 16
    • 0001119282 scopus 로고
    • Infrared measurements of peptide hydrogen exchange in rhodopsin
    • Osborne, H. B. and Nabedryk-Viala, E. (1982) Infrared measurements of peptide hydrogen exchange in rhodopsin. Methods Enzymol 88, 676-680
    • (1982) Methods Enzymol. , vol.88 , pp. 676-680
    • Osborne, H.B.1    Nabedryk-Viala, E.2
  • 17
    • 0022691315 scopus 로고
    • Examination of the secondary structure of proteins by deconvolved FTIR spectra
    • Byler, D. M. and Susi, H. (1986). Examination of the secondary structure of proteins by deconvolved FTIR spectra. Biopolymers 25, 469-487
    • (1986) Biopolymers , vol.25 , pp. 469-487
    • Byler, D.M.1    Susi, H.2
  • 18
    • 0027354020 scopus 로고
    • Quantitative studies of the structure of proteins in solutions by Fourier-transform infrared spectroscopy
    • Arrondo, J. L. R., Muga, A., Castresana, J. and Goñi, F. M. (1993) Quantitative studies of the structure of proteins in solutions by Fourier-transform infrared spectroscopy. Prog. Biophys. Mol. Biol. 59, 23-56
    • (1993) Prog. Biophys. Mol. Biol. , vol.59 , pp. 23-56
    • Arrondo, J.L.R.1    Muga, A.2    Castresana, J.3    Goñi, F.M.4
  • 19
    • 0027492164 scopus 로고
    • Determination of protein secondary structure by Fourier transform infrared spectroscopy: A critical assessment
    • Surewicz, W. K., Mantsch, H. H. and Chapman, D. (1993) Determination of protein secondary structure by Fourier transform infrared spectroscopy: a critical assessment. Biochemistry 32, 389-394
    • (1993) Biochemistry , vol.32 , pp. 389-394
    • Surewicz, W.K.1    Mantsch, H.H.2    Chapman, D.3
  • 20
    • 0023693897 scopus 로고
    • Structural and conformational changes of β-lactoglobulin B: An infrared spectroscopic study of the effect of pH and temperature
    • Casal, H. L., Kohler, U. and Mantsch, H. H. (1988) Structural and conformational changes of β-lactoglobulin B: an infrared spectroscopic study of the effect of pH and temperature. Biochim. Biophys. Acta 957, 11-20
    • (1988) Biochim. Biophys. Acta , vol.957 , pp. 11-20
    • Casal, H.L.1    Kohler, U.2    Mantsch, H.H.3
  • 21
    • 0026516588 scopus 로고
    • Halogenated alcohols as solvent for proteins: FTIR spectroscopic studies
    • Jackson, M. and Mantsch, H. H. (1992) Halogenated alcohols as solvent for proteins: FTIR spectroscopic studies. Biochim. Biophys. Acta 1118, 139-143
    • (1992) Biochim. Biophys. Acta , vol.1118 , pp. 139-143
    • Jackson, M.1    Mantsch, H.H.2
  • 22
    • 0000998463 scopus 로고    scopus 로고
    • NMR solution structure of a novel thioredoxin from Bacillus acidocaldarius. Possible determinants of protein stability
    • Nicastro, G., de Chiara, C., Pedone, E, Tatò M., Rossi, M. and Bartolucci, S. (2000) NMR solution structure of a novel thioredoxin from Bacillus acidocaldarius. Possible determinants of protein stability. Eur. J. Biochem. 267, 403-413
    • (2000) Eur. J. Biochem. , vol.267 , pp. 403-413
    • Nicastro, G.1    De Chiara, C.2    Pedone, E.3    Tatò, M.4    Rossi, M.5    Bartolucci, S.6
  • 23
    • 0023008334 scopus 로고
    • Vibrational spectroscopy and conformation of peptides, polypeptides and proteins
    • Krimm, S. and Bandekar, J. (1986) Vibrational spectroscopy and conformation of peptides, polypeptides and proteins. Adv. Protein Chem. 38, 181-364
    • (1986) Adv. Protein Chem. , vol.38 , pp. 181-364
    • Krimm, S.1    Bandekar, J.2
  • 24
    • 0016797947 scopus 로고
    • Estimation of amino acid residue side-chain absorption in the infrared spectra of protein solutions in heavy water
    • Chirgadze, Y. N., Fedorow, O. W. and Trushina, N. P. (1975) Estimation of amino acid residue side-chain absorption in the infrared spectra of protein solutions in heavy water. Biopolymers 14, 679-694
    • (1975) Biopolymers , vol.14 , pp. 679-694
    • Chirgadze, Y.N.1    Fedorow, O.W.2    Trushina, N.P.3
  • 25
    • 0026491207 scopus 로고
    • Structural and functional relationships in Dnak and Dnak756 heat-shock proteins from E. coli
    • Banecki, B., Zylicz, M., Bertoli, E. and Tanfani, F. (1992) Structural and functional relationships in Dnak and Dnak756 heat-shock proteins from E. coli. J. Biol. Chem. 267, 25051-25058
    • (1992) J. Biol. Chem. , vol.267 , pp. 25051-25058
    • Banecki, B.1    Zylicz, M.2    Bertoli, E.3    Tanfani, F.4
  • 26
    • 0027216215 scopus 로고
    • Fourier transform infrared spectroscopy and electrochemistry of the primary electron donor in Rhodobacter sphaeroides and Rhodopseudomonas viridis reaction center: Vibrational modes of the pigments in situ and evidence for protein and water modes affected by P* formation
    • Leonard, M. and Maentele, W. (1993) Fourier transform infrared spectroscopy and electrochemistry of the primary electron donor in Rhodobacter sphaeroides and Rhodopseudomonas viridis reaction center: vibrational modes of the pigments in situ and evidence for protein and water modes affected by P* formation. Biochemistry 32, 4532-4538
    • (1993) Biochemistry , vol.32 , pp. 4532-4538
    • Leonard, M.1    Maentele, W.2
  • 27
    • 0002940127 scopus 로고
    • The molten globule state
    • Creighton, T. E., ed. W. H. Freeman and Company, New York
    • Ptitsyn, O. B. (1992) The molten globule state. In Protein Folding (Creighton, T. E., ed.) pp. 243-300, W. H. Freeman and Company, New York
    • (1992) Protein Folding , pp. 243-300
    • Ptitsyn, O.B.1
  • 28
    • 0035902439 scopus 로고    scopus 로고
    • Two-domensional infrared correlation spectroscopy as a probe of sequential events in the thermal unfolding of cytochromes c
    • Filosa, A., Wang, Y., Ismail, A. A. and Englich, A. M. (2001) Two-domensional infrared correlation spectroscopy as a probe of sequential events in the thermal unfolding of cytochromes c. Biochemistry 40, 8256-8263
    • (2001) Biochemistry , vol.40 , pp. 8256-8263
    • Filosa, A.1    Wang, Y.2    Ismail, A.A.3    Englich, A.M.4
  • 29
    • 0029165589 scopus 로고
    • Thioredoxin: A fold for all reasons
    • Cambridge, MA, U.S.A.
    • Martin, J. L. (1995) Thioredoxin: a fold for all reasons. Structure (Cambridge, MA, U.S.A) 3, 245-250
    • (1995) Structure , vol.3 , pp. 245-250
    • Martin, J.L.1
  • 30
    • 0025880710 scopus 로고
    • Studies of peptides forming 310- and α-helices and β-bend ribbon structures in organic solutions and in model biomembranes by Furier transform infrared spectroscopy
    • Kennedy, D. F., Crisma, M., Toniolo, C. and Capman, D. (1991) Studies of peptides forming 310- and α-helices and β-bend ribbon structures in organic solutions and in model biomembranes by Furier transform infrared spectroscopy. Biochemistry 30, 6541-6548
    • (1991) Biochemistry , vol.30 , pp. 6541-6548
    • Kennedy, D.F.1    Crisma, M.2    Toniolo, C.3    Capman, D.4
  • 31
    • 0035827318 scopus 로고    scopus 로고
    • Protein misfolding and disease; protein refolding and therapy
    • Soto, C. (2001) Protein misfolding and disease; protein refolding and therapy. FEBS Lett. 498, 204-207
    • (2001) FEBS Lett. , vol.498 , pp. 204-207
    • Soto, C.1
  • 33
    • 0029917563 scopus 로고    scopus 로고
    • Molten globule-like state of cytochrome c under conditions simulating those near the membrane surface
    • Bychkova, V. E., Dujsekina, A. E., Klenin, S. I., Tiktopulo, E. I., Uversky, V. N. and Ptitsyn, O. B. (1996) Molten globule-like state of cytochrome c under conditions simulating those near the membrane surface. Biochemistry 35, 6058-6063
    • (1996) Biochemistry , vol.35 , pp. 6058-6063
    • Bychkova, V.E.1    Dujsekina, A.E.2    Klenin, S.I.3    Tiktopulo, E.I.4    Uversky, V.N.5    Ptitsyn, O.B.6
  • 34
    • 0023710642 scopus 로고
    • The molten globule state is involved in the translocation of proteins across membranes?
    • Bychkova, V. E., Pain, R. H. and Ptitsyn, O. B. (1988) The molten globule state is involved in the translocation of proteins across membranes? FEBS Lett. 238, 231-234
    • (1988) FEBS Lett. , vol.238 , pp. 231-234
    • Bychkova, V.E.1    Pain, R.H.2    Ptitsyn, O.B.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.