One hundred spots parallel monitoring of DNA interactions by SPR imaging of polymer-functionalized surfaces applied to the detection of cystic fibrosis mutations

Sensors and Actuators, B: Chemical

Volumn 94, Issue 3, 2003, Pages 313-323

  Bassil, Nathalie ^a   Maillart, Emmanuel ^a   Canva, Michael ^a   Lévy, Yves ^a   Millot, Marie Claude ^b   Pissard, Serge ^c   Narwa, Rémy ^c   Goossens, Michel ^c  

^a UNIV PARIS SUD   (France)

^b CNRS   (France)

^c HENRI MONDOR HOSPITAL   (France)

Author keywords

Biosensors; Cystic fibrosis; DNA mutation; ExtrAvidin; Parallel detection; Surface plasmon resonance imaging

Indexed keywords

DISEASES; IMAGING SYSTEMS; MULTILAYERS; POLYMERS; SELF ASSEMBLY; SURFACE PLASMON RESONANCE;

PARALLEL DETECTION;

DNA;

EID: 0042592845     PISSN: 09254005     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0925-4005(03)00462-3     Document Type: Article

References (28)

1. http://www.genet.sickkids.on.ca/cftr /, CFTR mutation database.
2. Feriotto G., Lucci M., Bianchi N., Mischiati C., Gambari R. Detection of the (F508 ΔF508del) mutation of the cystic fibrosis gene by surface plasmon resonance and biosensor technology. Hum. Mutat. 13:1999;390-400.
3. Zizlsperger M., Knoll W., Lagaly G. Multispot parallel on-line monitoring of interfacial binding reactions by surface plasmon microscopy. Progr. Colloid Polym. Sci. 109:1998;244-253.
4. Cheung V.G., Morley M., Aguilar F., Massimi A., Kucherlapati R., Childs G., Collins-Francis S.P., Phimister-Bette I. Making and reading microarrays: the chipping forecast. Nat. Genet. 21:1999;15-19.
5. Duggan D.J., Bittner M., Chen Y., Meltzer P., Trent J.M. Expression profiling using cDNA microarrays. Nat. Genet. Suppl. 21:1999;10-19.
6. http://www.affymetrix.com/index.affx.
7. http://www.nanogen.com/.
8. G. Kovacs, in: A.D. Boardman (Ed.), Electromagnetic Surface Modes, Wiley, New York, 1982, Chapter 4, pp. 143-200.
9. Homola J., Yee S.S., Gauglitz G. Surface plasmon resonance sensors: review. Sens. Actuators B. 54:1999;3-15.
10. Homola J., Koudela I., Yee S.S. Surface plasmon resonance sensors based on diffraction gratings and prism couplers: sensitivity comparison. Sens. Actuators B. 54:1999;16-24.
11. http://www.biacore.com.
12. Piscevic D., Lawall R., Veith M., Liley M., Okahata Y., Knoll W. Oligonucleotide hybridization observed by surface plasmon optical techniques. Appl. Surf. Sci. 90:1995;425-436.
13. Feriotto G., Ferlini A., Ravani A., Calzolari E., Mischiati C., Bianchi N., Gambari R. Biosensor technology for real-time detection of the cystic fibrosis W1282X mutation in CFTR. Hum. Mutat. 18:2001;70-81.
14. Peterson W.A., Heaton R.J., Georgiadis R.M. The effect of surface probe density on DNA hybridization. Nucleic Acids Res. 29:2001;5163-5168.
15. Nilsson P., Persson B., Larsson A., Uhlén M., Nygren P.A. Detection of mutation in PCR products from clinical samples by surface plasmon resonance. J. Mol. Recognit. 10:1997;7-17.
16. Kai E., Sawata S., Ikebukuro K., Iida T., Honda T., Krube I. Detection of PCR products in solution using surface plasmon resonance. Anal. Chem. 71:1999;796-800.
17. Jensen K.K., Orum H., Nielsen P.E., Norden B. Kinetics for hybridization of peptide nucleic acids (PNA) with DNA and RNA studied with the BIAcore technique. Biochemistry. 36:1997;5072-5077.
18. Feriotto G., Corradini R., Sforza S., Bianchi N., Mischiati C., Marchelli R., Gambari R. Peptide nucleic acids and biosensor technology for real-time detection of cystic fibrosis W1282X mutation by surface plasmon resonance. Lab. Invest. 81:2001;1415-1427.
19. Kaganer E., Pogreb R., Davidov D., Willner I. Surface plasmon resonance characterization of photswichable antigen-antibody interactions. Langmuir. 15:1999;3920-3923.
20. Pei R., Yang X., Wang E. Enhanced surface plasmon resonance immunoassay for human complement factor 4. Anal. Chim. Acta. 453:2002;173-179.
21. Mariotti E., Minunni M., Mascini M. Surface plasmon resonance biosensor for genetically modified organisms detection. Anal. Chim. Acta. 453:2002;165-172.
22. Jordan C.E., Frutos A.G., Thiel A.J., Corn R.M. Surface plasmon resonance imaging measurements of DNA hybridization adsorption and streptavidin/DNA multilayer formation at chemically modified gold surfaces. Anal. Chem. 69:1997;4939-4947.
23. Brockman J.M., Frutos A.G., Corn R.M. A multistep chemical modification procedure to create DNA arrays on gold surfaces for the study of protein-DNA interactions with surface plasmon resonance imaging. J. Am. Chem. Soc. 121:1999;8044-8051.
24. Guedon P., Livache T., Martin F., Lesbre F., Roget A., Bidan G., Levy Y. Characterization and optimization of a real-time, parallel, label-free, polypyrrole-based DNA sensor by surface plasmon resonance imaging. Anal. Chem. 72:2000;6003-6009.
25. Nelson B.P., Grimsrud T.E., Liles M.R., Goodman R.M., Corn R.M. Surface plasmon resonance imaging measurements of DNA and RNA hybridization adsorption onto DNA microarrays. Anal. Chem. 73:2001;1-7.
26. O'Brien M.J., Perez-Luna V.H., Brueck S.R.J., Lopez G.P. A surface plasmon resonance array biosensor based on spectroscopic imaging. Biosens. Bioelectron. 16:2001;97-108.
27. Piscevic D., Knoll W., Tarlov M.J. Surface plasmon microscopy of biotin-streptavidin binding reactions on UV-photopatterned alkanethiol self-assembled monolayers. Supramol. Sci. 2:1995;99-106.
28. http://www.genetix.co.uk/productpages/instruments/x2000.htm.