Gene expression in lung adenocarcinomas of smokers and nonsmokers

American Journal of Respiratory Cell and Molecular Biology

Volumn 29, Issue 2, 2003, Pages 157-162

  Powell, Charles A ^b   Spira, Avrum ^b   Derti, Adnan ^b   DeLisi, Charles ^b   Liu, Gang ^b   Borczuk, Alain ^b   Busch, Steve ^b   Sahasrabudhe, Sudhir ^b   Chen, Yangde ^b   Sugarbaker, David ^b   Bueno, Raphael ^b   Richards, William G ^b   Brody, Jerome S ^a  

^a BOSTON UNIVERSITY MEDICAL CENTER   (United States)

^b NONE

Author keywords

[No Author keywords available]

Indexed keywords

ADULT; AGED; ARTICLE; BIOINFORMATICS; CARCINOGENESIS; CELL DIFFERENTIATION; CELL TRANSFORMATION; CLINICAL ARTICLE; CORRELATION ANALYSIS; FEMALE; GENE EXPRESSION; HISTOLOGY; HUMAN; LUNG ADENOCARCINOMA; MALE; SIGNAL TRANSDUCTION; SMOKING;

ADENOCARCINOMA; ADULT; AGED; CELL DIFFERENTIATION; CELL TRANSFORMATION, NEOPLASTIC; COMPUTATIONAL BIOLOGY; FEMALE; GENE EXPRESSION REGULATION, NEOPLASTIC; HUMANS; LUNG NEOPLASMS; MALE; MIDDLE AGED; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; PHYLOGENY; SMOKING;

EID: 0042354727     PISSN: 10441549     EISSN: None     Source Type: Journal    
DOI: 10.1165/rcmb.2002-0183RC     Document Type: Article

References (15)

1. Greenlee, R. T., M. B. Hill-Harmon, T. Murray, and M. Thun. 2001. Cancer statistics. 2001. CA Cancer J. Clin. 51:15-36.
2. Bhattacharjee, A., W. G. Richards, J. Staunton, C. Li, S. Monti, P. Vasa. C. Ladd, J. Beheshti, R. Bueno, M. Gillette, M. Loda, G. Weber, E. J. Mark, E. S. Lander, W. Wong, B. E. Johnson, T. R. Golub, D. J. Sugarbaker, and M. Meyerson. 2001. Classification of human lung carcinomas by mRNA expression profiling reveals distinct adenocarcinoma subclasses. Proc. Natl. Acad. Sci. USA 98:13790-13795.
3. Garber, M. E., O. G. Troyanskaya, K. Schluens, S. Petersen, Z. Thaesler, M. Pacyna-Gengelbach, R. M. van de Rijn, G. D. Rosen, C. M. Perou, R. I. Whyte, R. B. Altman, P. O. Brown, D. Botstein, and I. Petersen. 2001. Diversity of gene expression in adenocarcinoma of the lung. Proc. Natl. Acad. Sci. USA 98:13784-13789.
4. Giordano, T. J., K. A. Shedden, D. R. Schwartz, R. Kuick, J. M. Taylor, N. Lee, D. E. Misek, J. K. Greenson, S. L. Kardia, D. G. Beer, G. Rennert, K. R. Cho, S. B. Gruber, E. R. Fearon, and S. Hanash. 2001. Organ-specific molecular classification of primary lung, colon, and ovarian adenocarcinomas using gene expression profiles. Am. J. Pathol. 159:1231-1238.
5. Beer, D. G., S. L. Kardia, C. C. Huang, T. J. Giordano, A. M. Levin, D. E. Misek, L. Lin, G. Chen, T. G. Gharib, D. G. Thomas, M. L. Lizyness, R. Kuick, S. Hayasaka, J. M. Taylor, M. D. Iannettoni, M. B. Orringer, and S. Hanash. 2002. Gene-expression profiles predict survival of patients with lung adenocarcinoma. Nat. Med. 8:816-824.
6. Anbazhagan, R., T. Tihan, D. M. Bornman, J. C. Johnston, J. H. Saitz, A. Weigering, S. Piantadosi, and E. Gabrielson. 1999. Classification of small cell lung cancer and pulmonary carcinoid by gene expression profiles. Cancer Res. 59:5119-5122.
7. Tamayo, P., D. Slonim, J. Mesirov, Q. Zhu, S. Kitareewan, E. Dmitrovsky, E. S. Lander, and T. R. Golub. 1999. Interpreting patterns of gene expression with self-organizing maps: methods and application to hematopoietic differentiation. Proc. Natl. Acad. Sci. USA 96:2907-2912.
8. Benjamini, Y., and Y. Hochberg. 1995. Controlling the false discovery rate: a practical and powerful approach to multiple testing. J. R. Stat. Soc. (Ser. B) 57:289-300.
9. MacDonald, T. J., K. M. Brown, B. LaFleur, K. Peterson, C. Lawlor, Y. Chen, R. J. Packer, P. Cogen, and D. A. Stephan. 2001. Expression profiling of medulloblastoma: PDGFRA and the RAS/MAPK pathway as therapeutic targets for metastatic disease. Nat. Genet. 29:143-152.
10. Tusher, V. G., R. Tibshirani, and G. Chu. 2001. Significance analysis of microarrays applied to the ionizing radiation response. Proc. Natl. Acad. Sci. USA 98:5116-5121.
11. Kaminski, N., and N. Friedman. 2002. Practical approaches to analyzing results of microarray experiments. Am. J. Respir. Cell Mol. Biol. 27:125-132.
12. Pomeroy, S. L., P. Tamayo, M. Gaasenbeek, L. M. Sturla, M. Angelo, M. E. McLaughlin, J. Y. Kim, L. C. Goumnerova, P. M. Black, C. Lau, J. C. Allen, D. Zagzag, J. M. Olson, T. Curran, C. Wetmore, J. A. Biegel, T. Poggio, S. Mukherjee, R. Rifkin, A. Califano, G. Stolovitzky, D. N. Louis, J. P. Mesirov, E. S. Lander, and T. R. Golub. 2002. Prediction of central nervous system embryonal tumour outcome based on gene expression. Nature 415:436-442.
13. Wistuba, I. I., S. Lam, C. Behrens, A. K. Virmani, K. M. Fong, J. LeRiche, J. M. Samet, S. Srivastava, J. D. Minna, and A. F. Gazdar. 1997. Molecular damage in the bronchial epithelium of current and former smokers. J. Natl. Cancer Inst. 89:1366-1373.
14. Powell, C. A., S. Klares, G. O'Connor, and J. S. Brody. 1999. Loss of heterozygosity in epithelial cells obtained by bronchial brushing: clinical utility in lung cancer. Clin. Cancer Res. 5:2025-2034.
15. Sueoka, E., N. Sueoka, Y. Goto, S. Matsuyama, H. Nishimura, M. Sato, S. Fujimura, H. Chiba, and H. Fujiki. 2001. Heterogeneous nuclear ribonucleoprotein B1 as early cancer biomarker for occult cancer of human lungs and bronchial dysplasia. Cancer Res. 61:1896-1902.