-
1
-
-
18344396568
-
Minimum information about a microarray experiment (MIAME) - Toward standards for microarray data
-
Brazma A, Hingamp P, Quackenbush J, Sherlock G, Spellman P, Stoeckert C, Aach J, Ansorge W, Ball CA, Causton HC et al. 2001 Minimum information about a microarray experiment (MIAME) - toward standards for microarray data. Nature Genetics 29 365-371.
-
(2001)
Nature Genetics
, vol.29
, pp. 365-371
-
-
Brazma, A.1
Hingamp, P.2
Quackenbush, J.3
Sherlock, G.4
Spellman, P.5
Stoeckert, C.6
Aach, J.7
Ansorge, W.8
Ball, C.A.9
Causton, H.C.10
-
2
-
-
0034657861
-
Bootstrap confidence intervals: When, which, what? A practical guide for medical statisticians
-
Carpenter J & Bithell J 2000 Bootstrap confidence intervals: when, which, what? A practical guide for medical statisticians. Statistics in Medicine 19 1141-1164.
-
(2000)
Statistics in Medicine
, vol.19
, pp. 1141-1164
-
-
Carpenter, J.1
Bithell, J.2
-
3
-
-
0036740360
-
Ratio statistics of gene expression levels and applications to microarray data analysis
-
Chen Y, Kamat V, Dougherty ER, Bittner ML, Meltzer PS & Trent JM 2002 Ratio statistics of gene expression levels and applications to microarray data analysis. Bioinformatics 18 1207-1215.
-
(2002)
Bioinformatics
, vol.18
, pp. 1207-1215
-
-
Chen, Y.1
Kamat, V.2
Dougherty, E.R.3
Bittner, M.L.4
Meltzer, P.S.5
Trent, J.M.6
-
4
-
-
14844364789
-
Post-analysis follow-up and validation of microarray experiments
-
Chuaqui RF, Bonner RF, Best CJM, Gillespie JW, Flaig MJ, Hewitt SM, Phillips JL, Krizman DB, Tangrea MA, Ahram M et al. 2001 Post-analysis follow-up and validation of microarray experiments. Nature Genetics 32 509-514.
-
(2001)
Nature Genetics
, vol.32
, pp. 509-514
-
-
Chuaqui, R.F.1
Bonner, R.F.2
Best, C.J.M.3
Gillespie, J.W.4
Flaig, M.J.5
Hewitt, S.M.6
Phillips, J.L.7
Krizman, D.B.8
Tangrea, M.A.9
Ahram, M.10
-
5
-
-
0036900895
-
Fundamentals of experimental design for cDNA microarrays
-
Churchill G 2002 Fundamentals of experimental design for cDNA microarrays. Nature Genetics Supplement 32 490-495.
-
(2002)
Nature Genetics Supplement
, vol.32
, pp. 490-495
-
-
Churchill, G.1
-
7
-
-
0043142429
-
High-density DNA microarrays for expression profiling
-
Deyholos MK & Galbraith DW 2001 High-density DNA microarrays for expression profiling. Cytometry 43 229-248.
-
(2001)
Cytometry
, vol.43
, pp. 229-248
-
-
Deyholos, M.K.1
Galbraith, D.W.2
-
9
-
-
0036376993
-
Statistical methods for identifying differentially expressed genes in replicated cDNA microarray experiments
-
Dudoit S, Yang YH, Callow MJ & Speed TP 2002 Statistical methods for identifying differentially expressed genes in replicated cDNA microarray experiments. Statistica Sinica 12 111-139.
-
(2002)
Statistica Sinica
, vol.12
, pp. 111-139
-
-
Dudoit, S.1
Yang, Y.H.2
Callow, M.J.3
Speed, T.P.4
-
10
-
-
0041699628
-
Expression profiling using cDNA microarrays
-
Duggan DJ, Bittner M, Chen Y, Meltzer P & Trent JM 1999 Expression profiling using cDNA microarrays. Science 283 83-87.
-
(1999)
Science
, vol.283
, pp. 83-87
-
-
Duggan, D.J.1
Bittner, M.2
Chen, Y.3
Meltzer, P.4
Trent, J.M.5
-
11
-
-
0037314037
-
Combinatorial image analysis of DNA microarray features
-
Glasbey CA & Ghazal P 2003 Combinatorial image analysis of DNA microarray features. Bioinformatics 19 194-203.
-
(2003)
Bioinformatics
, vol.19
, pp. 194-203
-
-
Glasbey, C.A.1
Ghazal, P.2
-
12
-
-
0043203326
-
Factorial designs for microarray experiments
-
In preparation
-
Glonek GFV & Solomon PJ 2002 Factorial designs for microarray experiments. In preparation (http://mag.maths.adelaide.edu.au/ fact_designs.pdf).
-
(2002)
-
-
Glonek, G.F.V.1
Solomon, P.J.2
-
13
-
-
0033818954
-
A concise guide to cDNA microarray analysis
-
Hegde P, Qi R, Abernathy K, Gay C, Dharap S, Gaspard R, Hughes JE, Snesrud E, Lee N & Quackenbush J 2000 A concise guide to cDNA microarray analysis. BioTechniques 29 548-562.
-
(2000)
BioTechniques
, vol.29
, pp. 548-562
-
-
Hegde, P.1
Qi, R.2
Abernathy, K.3
Gay, C.4
Dharap, S.5
Gaspard, R.6
Hughes, J.E.7
Snesrud, E.8
Lee, N.9
Quackenbush, J.10
-
14
-
-
0035032570
-
Statistical design and the analysis of gene expression microarray data
-
Kerr K & Churchill G 2001 Statistical design and the analysis of gene expression microarray data. Genetical Research 77 123-128.
-
(2001)
Genetical Research
, vol.77
, pp. 123-128
-
-
Kerr, K.1
Churchill, G.2
-
16
-
-
0013219175
-
The Chipping Forecast II
-
Nature Genetics
-
Nature Genetics 2002 The Chipping Forecast II. Nature Genetics 32 (Suppl) 461-552.
-
(2002)
Nature Genetics
, vol.32
, Issue.SUPPL.
, pp. 461-552
-
-
-
17
-
-
0035375137
-
Computational analysis of microarray data
-
Quackenbush J 2001 Computational analysis of microarray data. Nature Review Genetics 2 418-427.
-
(2001)
Nature Review Genetics
, vol.2
, pp. 418-427
-
-
Quackenbush, J.1
-
18
-
-
0036898577
-
Microarray data normalization and transformation
-
Quackenbush J 2002 Microarray data normalization and transformation. Nature Genetics 32 496-501.
-
(2002)
Nature Genetics
, vol.32
, pp. 496-501
-
-
Quackenbush, J.1
-
19
-
-
0034656561
-
Normalization strategies for cDNA microarrays
-
Schuchhardt J, Beule D, Malik A, Wolski E, Eickhoff H, Lehrach H & Herzel H 2000 Normalization strategies for cDNA microarrays. Nucleic Acid Research 28 E47.
-
(2000)
Nucleic Acid Research
, vol.28
-
-
Schuchhardt, J.1
Beule, D.2
Malik, A.3
Wolski, E.4
Eickhoff, H.5
Lehrach, H.6
Herzel, H.7
-
20
-
-
1242323130
-
Statistical Analysis of Gene Expression Microarray Data
-
Boca Raton: CRC Press
-
Speed TP 2002 Statistical Analysis of Gene Expression Microarray Data. Boca Raton: CRC Press.
-
(2002)
-
-
Speed, T.P.1
-
21
-
-
0036362934
-
Practical approaches to long oligonucleotide-based DNA microarray: Lessons from herpesvirus
-
Wagner E, Garcia Ramirez JJ, Stingley SW, Aguilar SA, Buehler L, Devi-Rao GB & Ghazal P 2002 Practical approaches to long oligonucleotide-based DNA microarray: lessons from herpesvirus. Progress in Nucleic Acid Research 71 445-491.
-
(2002)
Progress in Nucleic Acid Research
, vol.71
, pp. 445-491
-
-
Wagner, E.1
Garcia Ramirez, J.J.2
Stingley, S.W.3
Aguilar, S.A.4
Buehler, L.5
Devi-Rao, G.B.6
Ghazal, P.7
-
22
-
-
0037167899
-
Within the fold: Assessing differential expression measures and reproducibility in microarray assays
-
Yang IV, Chen E, Hasseman JP, Liang W, Frank BC, Wang S, Sharov V, Saeed AI, White J, Li J et al. 2002a Within the fold: assessing differential expression measures and reproducibility in microarray assays. Genome Biology 3 0062.1-0062.12.
-
(2002)
Genome Biology
, vol.3
-
-
Yang, I.V.1
Chen, E.2
Hasseman, J.P.3
Liang, W.4
Frank, B.C.5
Wang, S.6
Sharov, V.7
Saeed, A.I.8
White, J.9
Li, J.10
-
24
-
-
0036319960
-
Design issues for cDNA microarray experiments
-
Yee HY & Speed TP 2002 Design issues for cDNA microarray experiments. Nature Review, Genetics 3 579-588.
-
(2002)
Nature Review Genetics
, vol.3
, pp. 579-588
-
-
Yee, H.Y.1
Speed, T.P.2
|