Assignment of 'Alteromonas marinoglutinosa' NCIMB 1770 to Pseudoalteromonas mariniglutinosa sp. nov., nom. rev., comb. nov

International Journal of Systematic and Evolutionary Microbiology

Volumn 53, Issue 4, 2003, Pages 1105-1109

  Romanenko, Lyudmila A ^a   Zhukova, Natalia V ^b   Lysenko, Anatoly M ^c   Mikhailov, Valery V ^a   Stackebrandt, Erko ^d  

^a PACIFIC INSTITUTE OF BIOORGANIC CHEMISTRY   (Russian Federation)

^b INSTITUTE OF MARINE BIOLOGY   (Russian Federation)

^c RUSSIAN ACADEMY OF SCIENCES   (Russian Federation)

^d LEIBNIZ INSTITUTE DSMZ GERMAN COLLECTION OF MICROORGANISMS AND CELL CULTURES   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

DNA 16S; RIBOSOME DNA;

ALTEROMONAS; ALTEROMONAS MARINOGLUTINOSA; ARTICLE; BACTERIAL STRAIN; BACTERIOPLANKTON; CLASSIFICATION; CONTROLLED STUDY; DNA DNA HYBRIDIZATION; DNA SEQUENCE; GENUS; MOLECULAR BIOLOGY; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; PHYSIOLOGY; PRIORITY JOURNAL; PSEUDOALTEROMONAS; PSEUDOALTEROMONAS MARINIGLUTINOSA; SEQUENCE ANALYSIS; SPECIES DIFFERENCE; TAXONOMIC RANK;

ALTEROMONAS; BASE COMPOSITION; DNA, BACTERIAL; DNA, RIBOSOMAL; FATTY ACIDS; MOLECULAR SEQUENCE DATA; PHENOTYPE; PHYLOGENY; PSEUDOALTEROMONAS; RNA, BACTERIAL; RNA, RIBOSOMAL, 16S; TERMINOLOGY;

ALTEROMONAS; BACTERIA (MICROORGANISMS); NEGIBACTERIA; PROKARYOTA; PSEUDOALTEROMONAS; PSEUDOALTEROMONAS MARINIGLUTINOSA; UNCULTURED MARINE BACTERIUM;

EID: 0041810296     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.02564-0     Document Type: Article

References (36)

1. Akagawa-Matsushita, M., Matsuo, M., Koga, Y. & Yamasato, K. (1992). Alteromonas atlantica sp. nov. and Alteromonas carrageenovora sp. nov., bacteria that decompose algal polysaccharides. Int J Syst Bacteriol 42, 621-627.
2. Baumann, L., Baumann, P., Mandel, M. & Allen, R. D. (1972). Taxonomy of aerobic marine eubacteria. J Bacteriol 3, 402-429.
3. Baumann, P., Baumann, L., Bowditch, R. D. & Beaman, B. (1984). Taxonomy of Alteromonas: A. nigrifaciens sp. nov., nom. rev.; A. macleodii, and A. haloplanktis. Int J Syst Bacteriol 34, 145-149.
4. Berland, B. R., Bianchi, M. G. & Maestrini, S. Y. (1969). Etude des bactéries associées aux Algues marines en culture. I. Détermination préliminaire des espèces. Mar Biol 2, 350-355 (in French).
5. Bowman, J. P. (1998). Pseudoalteromonas prydzensis sp. nov., a psychrotrophic, halotolerant bacterium from Antarctic sea ice. Int J Syst Bacteriol 48, 1037-1041.
6. Bozal, N., Tudela, E., Rosselló-Mora, R., Lalucat, J. & Guinea, J. (1997). Pseudoalteromonas antarctica sp. nov., isolated from an Antarctic coastal environment. Int J Syst Bacteriol 47, 345-351.
7. Chan, K. Y., Baumann, L., Garza, M. M. & Baumann, P. (1978). Two new species of Alteromonas: Alteromonas espejiana and Alteromonas undina. Int J Syst Bacteriol 28, 217-222.
8. De Ley, J., Cattoir, H. & Reynaerts, A. (1970). The quantitative measurement of DNA hybridization from renaturation rates. Eur J Biochem 12, 133-142.
9. DeSoete, G. (1983). A least squares algorithm for fitting additive trees to proximity data. Psychometrika 48, 621-626.
10. De Vos, P., Van Landschoot A., Segers, P. & 9 other authors (1989). Genotypic relationships and taxonomic localization of unclassified Pseudomonas and Pseudomonas-like strains by deoxyribonucleic acid: Ribosomal ribonucleic acid hybridizations. Int J Syst Bacteriol 39, 35-49.
11. Felsenstein, J. (1993). PHYLIP (phylogenetic inference package) version 3.5.1. Department of Genetics, University of Washington, Seattle, USA.
12. Frolova, G. M., Kurilenko, V. V., Ivanova, E. P., Gorshkova, N. M. & Mikhallov, V. V. (2000). Phospholipids of marine proteobacteria of the genus Pseudoalteromonas. Mikrobiologiya 69, 506-510 (in Russian).
13. Gauthier, G., Gauthier, M. & Christen, R. (1995). Phylogenetic analysis of the genera Alteromonas, Shewanella, and Moritella using genes coding for small-subunit rRNA sequences and division of the genus Alteromonas into two genera, Alteromonas (emended) and Pseudoalteromonas gen, nov., and proposal of twelve new species combinations. Int J Syst Bacteriol 45, 755-761.
14. Isnansetyo, A. & Kemei, Y. (2003). Pseudoalteromonas phenolica sp. nov., a novel marine bacterium that produces phenolic anti-methicillin-resistant Staphylococcus aureus substances. Int J Syst Evol Microbiol 53, 583-588.
15. Ivanova, E. P., Kiprianova, E. A., Mikhailov, V. V., Levanova, G. F., Garagulya, A. D., Gorshkova, N. M., Yumoto, N. & Yoshikawa, S. (1996). Characterization and identification of marine Alteromonas nigrifaciens strains and emendation of the description. Int J Syst Bacteriol 46, 223-228.
16. Ivanova, E. P., Chun, J., Romanenko, L. A., Matte, M. E., Mikhailov, V. V., Frolova, G. M., Huq, A. & Colwell, R. R. (2000a). Reclassification of Alteromonas distincta Romanenko et al. 1995 as Pseudoalteromonas distincta comb. nov. Int J Syst Evol Microbiol 50, 141-144.
17. Ivanova, E. P., Zhukova, N. V., Svetashev, V. I., Gorshkova, N. M., Kurilenko, V. V., Frolova, G. M. & Mikhailov, V. V. (2000b). Evaluation of phospholipid and fatty acid compositions as chemotaxonomic markers of Alteromonas-like Proteobacteria. Curr Microbiol 41, 341-345.
18. Ivanova, E. P., Romanenko, L. A., Matté, M. H. & 10 other authors (2001). Retrieval of the species Alteromonas tetraodonis Simidu et al. 1990 as Pseudoalteromonas tetraodonis comb. nov. and emendation of description. Int J Syst Evol Microbiol 51, 1071-1078.
19. Ivanova, E. P., Sawabe, T., Alexeeva, Y. V., Lysenko, A. M., Gorshkova, N. M., Hayashi, K., Zukova, N. V., Christen, R. & Mikhailov, V. V. (2002a). Pseudoalteromonas issachenkonii sp. nov., a bacterium that degrades the thallus of the brown alga Fucus evanescens. Int J Syst Evol Microbiol 52, 229-234.
20. Ivanova, E. P., Sawabe, T., Lysenko, A. M. & 8 other authors (2002b). Pseudoalteromonas ruthenica sp. nov., isolated from marine invertebrates. Int J Syst Evol Microbiol 52, 235-240.
21. Ivanova, E. P., Shevchenko, L. S., Sawabe, T., Lysenko, A. M., Svetashev, V. I., Gorshkova, N. M., Satomi, M., Christen, R. & Mikhailov, V. V. (2002c). Pseudoalteromonas maricaloris sp. nov., isolated from an Australian sponge, and reclassification of [Pseudoalteromonas aurantia] NCIMB 2033 as Pseudoalteromonas flavipulchra sp. nov. Int J Syst Evol Microbiol 52, 263-271.
22. Ivanova, E. P., Sawabe, T., Lysenko, A. M., Gorshkova, N. M., Hayashi, K., Zhukova, N. V., Nicolau, D. V., Christen, R. & Mikhailov, V. V. (2002d). Pseudoalteromonas translucida sp. nov. and Pseudoalteromonas paragorgicola sp. nov., and emended description of the genus. Int J Syst Evol Microbiol 52, 1759-1766.
23. Leifson, E. (1963). Determination of carbohydrate metabolism of marine bacteria. J Bacteriol 85, 1183-1184.
24. Marmur, J. & Doty, P. (1962). Determination of the base composition of deoxyribonucleic acid from its thermal denaturation temperature. J Mol Biol 5, 109-118.
25. Mikhailov, V. V., Romanenko, L. A. & Ivanova, E. P. (2002). The genus Alteromonas and related Proteobacteria. In The Prokaryotes, 3rd edn, release 3.10. Edited by M. Dworkin, S. Falkow, E. Rosenberg, K.-H. Schleifer & E. Stackebrandt. New York: Springer.
26. Owen, R. J., Hill, L. R. & Lapage, S. P. (1969). Determination of DNA base compositions from melting profiles in dilute buffers. Biopolymers 7, 503-516.
27. Rainey, F. A., Ward-Rainey, N., Kroppenstedt, R. M. & Stackebrandt, E. (1996). The genus Nocardiopsis represents a phylogenetically coherent taxon and distinct actinomycete lineage: proposal of Nocardiopsaceae fam. nov. Int J Syst Bacteriol 46, 1088-1092.
28. Romanenko, L. A., Zhukova, N. V., Rohde, M., Lysenko, A. M., Mikhailov, V. V. & Stackebrandt, E. (2003). Pseudoalteromonas agarivorans sp. nov., a novel marine agarolytic bacterium. Int J Syst Evol Microbiol 53, 125-131.
29. T and five strains isolated from spot-wounded fronds of Laminaria japonica to Pseudoalteromonas elyakovii comb. nov. and the extended description of the species. Int J Syst Evol Microbiol 50, 265-271.
30. Smibert, R. M. & Krieg, N. R. (1994). Phenotypic characterization. In Methods for General and Molecular Bacteriology, pp. 607-655. Edited by P. Gerhardt, R. G. E. Murray, W. A. Wood & N. R. Krieg. Washington, DC: American Society for Microbiology.
31. Stackebrandt, E. & Goebel, B. M. (1994). Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int J Syst Bacteriol 44, 846-849.
32. Svetashev, V. I., Vysotskii, M. V., Ivanova, E. P. & Mikhailov, V. V. (1995). Cellular fatty acids of Alteromonas species. Syst Appl Microbiol 18, 37-43.
33. Wayne, L. G., Brenner, D. J., Colwell, R. R. & 9 other authors (1987). International Committee on Systematic Bacteriology. Report of the ad hoc committee on reconciliation of approaches to bacterial systematics. Int J Syst Bacteriol 37, 463-464.
34. Wink, J. M., Kroppenstedt, R. M., Ganguli, B. N., Nadkami, S. R., Schumann, P., Seibert, G. & Stackebrandt, E. (2003). Three new antibiotic producing species of the genus Amycolatopsis, Amycolatopsis balhimycina sp. nov., A. tolypomycina sp. nov., A. vancoresmycina sp. nov., and description of Amycolatopsis keratiniphila subsp. keratiniphila subsp. nov. and A. keratiniphila subsp. nogabecina subsp. nov. Syst Appl Microbiol 26, 38-46.
35. Yaphe, W. & Baxter, B. (1955). The enzymatic hydrolysis of carrageenan. Appl Microbiol 3, 380-383.
36. ZoBell, C. E. & Allen, E. C. (1935). The significance of marine bacteria in the fouling of submerged surfaces. J Bacteriol 29, 239-251.