-
1
-
-
0028887546
-
Rapid long-range proton diffusion along the surface of the purple membrane and delayed proton transfer into the bulk
-
Alexiev, U., R. Mollaaghababa, P. Scherrer, H. G. Khorana, and M. P. Heyn. 1995. Rapid long-range proton diffusion along the surface of the purple membrane and delayed proton transfer into the bulk. Proc. Natl. Acad. Sci. USA. 92:372-376.
-
(1995)
Proc. Natl. Acad. Sci. USA.
, vol.92
, pp. 372-376
-
-
Alexiev, U.1
Mollaaghababa, R.2
Scherrer, P.3
Khorana, H.G.4
Heyn, M.P.5
-
2
-
-
0032478192
-
Time and pH dependence of the L-to-M transition in the photocycle of bacteriorhodopsin and its correlation with proton release
-
Althaus, T., and M. Stockburger. 1998. Time and pH dependence of the L-to-M transition in the photocycle of bacteriorhodopsin and its correlation with proton release. Biochemistry. 37:2807-2817.
-
(1998)
Biochemistry
, vol.37
, pp. 2807-2817
-
-
Althaus, T.1
Stockburger, M.2
-
3
-
-
0025299602
-
The role of back-reactions and proton uptake during the N → O transition in bacteriorhodopsin's photocycle: A kinetic resonance raman study
-
Ames, J. B., and R. A. Mathies. 1990. The role of back-reactions and proton uptake during the N → O transition in bacteriorhodopsin's photocycle: a kinetic resonance Raman study. Biochemistry. 29: 7181-7190.
-
(1990)
Biochemistry
, vol.29
, pp. 7181-7190
-
-
Ames, J.B.1
Mathies, R.A.2
-
4
-
-
0017090242
-
Transient analyzer with logarithmic time base
-
Austin, R. H., K. W. Beeson, S. S. Chan, P. G. Debrunner, R. Downing, L. Eisenstein, H. Frauenfelder, and T. M. Nordlund. 1976. Transient analyzer with logarithmic time base. Rev. Sci. Instrum. 47:445-447.
-
(1976)
Rev. Sci. Instrum.
, vol.47
, pp. 445-447
-
-
Austin, R.H.1
Beeson, K.W.2
Chan, S.S.3
Debrunner, P.G.4
Downing, R.5
Eisenstein, L.6
Frauenfelder, H.7
Nordlund, T.M.8
-
5
-
-
0025740089
-
Red shift of the purple membrane absorption band and the deprotonation of tyrosine residues at high pH origin of the parallel photocycles of transbacteriorhodopsin
-
Balashov, S. P., R. Govindjee, and T. G. Ebrey. 1991. Red shift of the purple membrane absorption band and the deprotonation of tyrosine residues at high pH origin of the parallel photocycles of transbacteriorhodopsin. Biophys. J. 60:475-490.
-
(1991)
Biophys. J.
, vol.60
, pp. 475-490
-
-
Balashov, S.P.1
Govindjee, R.2
Ebrey, T.G.3
-
6
-
-
0028982167
-
The two pKa's of aspartate-85 and control of thermal isomerization and proton release in the arginine-82 to lysine mutant of bacteriorhodopsin
-
Balashov, S. P., R. Govindjee, E. S. Imasheva, S. Misra, T. G. Ebrey, Y. Feng, R. K. Crouch, and D. R. Menick. 1995. The two pKa's of aspartate-85 and control of thermal isomerization and proton release in the arginine-82 to lysine mutant of bacteriorhodopsin. Biochemistry. 34:8820-8834.
-
(1995)
Biochemistry
, vol.34
, pp. 8820-8834
-
-
Balashov, S.P.1
Govindjee, R.2
Imasheva, E.S.3
Misra, S.4
Ebrey, T.G.5
Feng, Y.6
Crouch, R.K.7
Menick, D.R.8
-
7
-
-
0030069626
-
Titration of aspartate-85 in bacteriorhodopsin: What it says about chromophore isomerization and proton release
-
Balashov, S. P., E. S. Imasheva, R. Govindjee, and T. G. Ebrey. 1996. Titration of aspartate-85 in bacteriorhodopsin: what it says about chromophore isomerization and proton release. Biophys. J. 70:473-481.
-
(1996)
Biophys. J.
, vol.70
, pp. 473-481
-
-
Balashov, S.P.1
Imasheva, E.S.2
Govindjee, R.3
Ebrey, T.G.4
-
9
-
-
0030087861
-
a of the chromophore counterion in bacteriorhodopsin: Implication for ion transport mechanisms of retinal proteins
-
a of the chromophore counterion in bacteriorhodopsin: implication for ion transport mechanisms of retinal proteins. Biophys. J. 70:939-947.
-
(1996)
Biophys. J.
, vol.70
, pp. 939-947
-
-
Braiman, M.S.1
Dioumaev, A.K.2
Lewis, J.R.3
-
10
-
-
0027244529
-
Estimated acid dissociation constants of the schiff base, asp-85, and arg-82 during the bacteriorhodopsin photocycle
-
Brown, L. S., L. Bonet, R. Needleman, and J. K. Lanyi. 1993. Estimated acid dissociation constants of the Schiff base, Asp-85, and Arg-82 during the bacteriorhodopsin photocycle. Biophys. J. 65:124-130.
-
(1993)
Biophys. J.
, vol.65
, pp. 124-130
-
-
Brown, L.S.1
Bonet, L.2
Needleman, R.3
Lanyi, J.K.4
-
11
-
-
0032539982
-
Local access model for proton transfer in bacteriorhodopsin
-
Brown, L. S., A. K. Dioumaev, R. Needleman, and J. K. Lanyi. 1998. Local access model for proton transfer in bacteriorhodopsin. Biochemistry. 37:3982-3993.
-
(1998)
Biochemistry
, vol.37
, pp. 3982-3993
-
-
Brown, L.S.1
Dioumaev, A.K.2
Needleman, R.3
Lanyi, J.K.4
-
12
-
-
0029864761
-
Determination of the transiently lowered pKa of the retinal schiff base during the photocycle of bacteriorhodopsin
-
Brown, L. S., and J. K. Lanyi. 1996. Determination of the transiently lowered pKa of the retinal Schiff base during the photocycle of bacteriorhodopsin. Proc. Natl. Acad. Sci. USA. 93:1731-1734.
-
(1996)
Proc. Natl. Acad. Sci. USA.
, vol.93
, pp. 1731-1734
-
-
Brown, L.S.1
Lanyi, J.K.2
-
13
-
-
0028864699
-
Glutamic acid 204 is the terminal proton release group at the extracellular surface of bacteriorhodopsin
-
Brown, L. S., J. Sasaki, H. Kandori, A. Maeda, R. Needleman, and J. K. Lanyi. 1995. Glutamic acid 204 is the terminal proton release group at the extracellular surface of bacteriorhodopsin. J. Biol Chem. 270: 27122-27126.
-
(1995)
J. Biol Chem.
, vol.270
, pp. 27122-27126
-
-
Brown, L.S.1
Sasaki, J.2
Kandori, H.3
Maeda, A.4
Needleman, R.5
Lanyi, J.K.6
-
14
-
-
0028949144
-
Relationship of proton release at the extracellular surface to deprotonation of the schiff base in the bacteriorhodopsin photocycle
-
Cao, Y., L. S. Brown, J. Sasaki, A. Maeda, R. Needleman, and J. K. Lanyi. 1995. Relationship of proton release at the extracellular surface to deprotonation of the Schiff base in the bacteriorhodopsin photocycle. Biophys. J. 68:1518-1530.
-
(1995)
Biophys. J.
, vol.68
, pp. 1518-1530
-
-
Cao, Y.1
Brown, L.S.2
Sasaki, J.3
Maeda, A.4
Needleman, R.5
Lanyi, J.K.6
-
15
-
-
0024658697
-
Kinetic model of bacteriorhodopsin photocycle: Pathway from m state to bR
-
Chernavskii, D. S., I. V. Chizhov, R. H. Lozier, T. M. Murina, A. M. Prokhorov, and B. V. Zubov. 1989. Kinetic model of bacteriorhodopsin photocycle: pathway from m state to bR. Photochem. Photobiol. 49: 649-653.
-
(1989)
Photochem. Photobiol.
, vol.49
, pp. 649-653
-
-
Chernavskii, D.S.1
Chizhov, I.V.2
Lozier, R.H.3
Murina, T.M.4
Prokhorov, A.M.5
Zubov, B.V.6
-
16
-
-
0029861264
-
Spectrally silent transitions in the bacteriorhodopsin photocycle
-
Chizhov, I. V., D. S. Chernavskii, M. Engelhard, K.-H. Müller, B. V. Zubov, and B. Hess. 1996. Spectrally silent transitions in the bacteriorhodopsin photocycle. Biophys. J. 71:2329-2345.
-
(1996)
Biophys. J.
, vol.71
, pp. 2329-2345
-
-
Chizhov, I.V.1
Chernavskii, D.S.2
Engelhard, M.3
Müller, K.-H.4
Zubov, B.V.5
Hess, B.6
-
17
-
-
0030735003
-
Evidence for the first phase of the reprotonation switch of bacteriorhodopsin from time-resolved photovoltage and flash photolysis experiments on the photoreversal of the M-intermediate
-
Dickopf, S., and M. P. Heyn. 1997. Evidence for the first phase of the reprotonation switch of bacteriorhodopsin from time-resolved photovoltage and flash photolysis experiments on the photoreversal of the M-intermediate. Biophys. J. 73:3171-3181.
-
(1997)
Biophys. J.
, vol.73
, pp. 3171-3181
-
-
Dickopf, S.1
Heyn, M.P.2
-
18
-
-
0031075390
-
Two bathointermediates of the bacteriorhodopsin photocycle, distinguished by nanosecond time-resolved FTIR spectroscopy at room temperature
-
Dioumaev, A. K., and M. S. Braiman. 1997. Two bathointermediates of the bacteriorhodopsin photocycle, distinguished by nanosecond time-resolved FTIR spectroscopy at room temperature. J. Phys. Chem. B. 101:1655-1662.
-
(1997)
J. Phys. Chem. B.
, vol.101
, pp. 1655-1662
-
-
Dioumaev, A.K.1
Braiman, M.S.2
-
19
-
-
0032562215
-
Existence of a proton transfer chain in bacteriorhodopsin: Participation of glu-194 in the release of protons to the extracellular surface
-
Dioumaev, A. K., H. T. Richter, L. S. Brown, M. Tanio, S. Tuzi, H. Saito, Y. Kimura, R. Needleman, and J. K. Lanyi. 1998. Existence of a proton transfer chain in bacteriorhodopsin: participation of Glu-194 in the release of protons to the extracellular surface. Biochemistry. 37: 2496-2506.
-
(1998)
Biochemistry
, vol.37
, pp. 2496-2506
-
-
Dioumaev, A.K.1
Richter, H.T.2
Brown, L.S.3
Tanio, M.4
Tuzi, S.5
Saito, H.6
Kimura, Y.7
Needleman, R.8
Lanyi, J.K.9
-
20
-
-
0027105851
-
The back photoreaction of the M intermediate in the photocycle of bacteriorhodopsin: Mechanism and evidence for two M species
-
Druckmann, S., N. Friedman, J. K. Lanyi, R. Needleman, M. Ottolenghi, and M. Sheves. 1992. The back photoreaction of the M intermediate in the photocycle of bacteriorhodopsin: mechanism and evidence for two M species. Photochem. Photobiol. 56:1041-1047.
-
(1992)
Photochem. Photobiol.
, vol.56
, pp. 1041-1047
-
-
Druckmann, S.1
Friedman, N.2
Lanyi, J.K.3
Needleman, R.4
Ottolenghi, M.5
Sheves, M.6
-
21
-
-
0027279276
-
Thermal equilibration between the M and N intermediates in the photocycle of bacteriorhodopsin
-
Druckmann, S., M. P. Heyn, J. K. Lanyi, M. Ottolenghi, and L. Zimanyi. 1993. Thermal equilibration between the M and N intermediates in the photocycle of bacteriorhodopsin. Biophys. J. 65:1231-1234.
-
(1993)
Biophys. J.
, vol.65
, pp. 1231-1234
-
-
Druckmann, S.1
Heyn, M.P.2
Lanyi, J.K.3
Ottolenghi, M.4
Zimanyi, L.5
-
22
-
-
0002979180
-
-
M. Jackson, editor. CRC Press, Boca Raton, FL.
-
Ebrey, T. G. 1993. Thermodynamics of Membranes, Receptors and Channels. M. Jackson, editor. CRC Press, Boca Raton, FL. 353-387.
-
(1993)
Thermodynamics of Membranes, Receptors and Channels.
, pp. 353-387
-
-
Ebrey, T.G.1
-
23
-
-
0027317955
-
Resonance raman and optical transient studies on the proton pump of bacteriorhodopsin reveal parallel photocycles
-
Eisfeld, W., C. Pusch, R. Diller, R. Lohrmann, and M. Stockburger. 1993. Resonance Raman and optical transient studies on the proton pump of bacteriorhodopsin reveal parallel photocycles. Biochemistry. 32: 7196-7215.
-
(1993)
Biochemistry
, vol.32
, pp. 7196-7215
-
-
Eisfeld, W.1
Pusch, C.2
Diller, R.3
Lohrmann, R.4
Stockburger, M.5
-
24
-
-
0001385068
-
The photoisomerization in bacteriorhodopsin studied by FTIR linear dichroism and photoselection experiments combined with quantum chemical theoretical analysis
-
Fahmy, K., M. F. Grossjean, F. Siebert, and P. Tavan. 1989. The photoisomerization in bacteriorhodopsin studied by FTIR linear dichroism and photoselection experiments combined with quantum chemical theoretical analysis. J. Mol. Struct. 214:257-288.
-
(1989)
J. Mol. Struct.
, vol.214
, pp. 257-288
-
-
Fahmy, K.1
Grossjean, M.F.2
Siebert, F.3
Tavan, P.4
-
25
-
-
0025757368
-
Structural investigation of bacteriorhodopsin and some of its photoproducts by polarized fourier transform infrared spectroscopic methods-difference spectroscopy and photoselection
-
Fahmy, K., F. Siebert, and P. Tavan. 1991. Structural investigation of bacteriorhodopsin and some of its photoproducts by polarized Fourier transform infrared spectroscopic methods-difference spectroscopy and photoselection. Biophys. J. 60:989-1001.
-
(1991)
Biophys. J.
, vol.60
, pp. 989-1001
-
-
Fahmy, K.1
Siebert, F.2
Tavan, P.3
-
27
-
-
0024280218
-
Chromophore structure in bacteriorhodopsin's N intermediate: Implications for the proton-pumping mechanism
-
Fodor, S. P. A., J. B. Ames, R. Gebhard, E. M. M. Van den Berg, W. Stoeckenius, J. Lugtenburg, and R. A. Mathies. 1988a. Chromophore structure in bacteriorhodopsin's N intermediate: implications for the proton-pumping mechanism. Biochemistry. 27:7097-7101.
-
(1988)
Biochemistry
, vol.27
, pp. 7097-7101
-
-
Fodor, S.P.A.1
Ames, J.B.2
Gebhard, R.3
Van Den Berg, E.M.M.4
Stoeckenius, W.5
Lugtenburg, J.6
Mathies, R.A.7
-
28
-
-
0024163082
-
Bacteriorhodopsin's L550 intermediate contains a C14-C15 s-trans-retinal chromophore
-
Fodor, S. P. A., W. T. Pollard, R. Gebhard, E. M. M. Van den Berg, J. Lugtenburg, and R. A. Mathies. 1988b. Bacteriorhodopsin's L550 intermediate contains a C14-C15 s-trans-retinal chromophore. Proc. Natl. Acad. Sci. USA. 85:2156-2160.
-
(1988)
Proc. Natl. Acad. Sci. USA.
, vol.85
, pp. 2156-2160
-
-
Fodor, S.P.A.1
Pollard, W.T.2
Gebhard, R.3
Van Den Berg, E.M.M.4
Lugtenburg, J.5
Mathies, R.A.6
-
29
-
-
0028597513
-
On the heterogeneity of the M population in the photocycle of bacteriorhodopsin
-
Friedman, N., Y. Gat, M. Sheves, and M. Ottolenghi. 1994. On the heterogeneity of the M population in the photocycle of bacteriorhodopsin. Biochemistry. 33:14758-14767.
-
(1994)
Biochemistry
, vol.33
, pp. 14758-14767
-
-
Friedman, N.1
Gat, Y.2
Sheves, M.3
Ottolenghi, M.4
-
30
-
-
0024707259
-
Role of aspartate-96 in proton translocation by bacteriorhodopsin
-
Gerwert, K., B. Hess, J. Soppa, and D. Oesterhelt. 1989. Role of aspartate-96 in proton translocation by bacteriorhodopsin. Proc. Natl. Acad. Sci. USA. 86:4943-4947.
-
(1989)
Proc. Natl. Acad. Sci. USA
, vol.86
, pp. 4943-4947
-
-
Gerwert, K.1
Hess, B.2
Soppa, J.3
Oesterhelt, D.4
-
31
-
-
0000311181
-
Evidence for light-induced 13-cis, 14-s-di isomerization in bacteriorhodopsin obtained by FTIR difference spectroscopy using isotopically labelled retinals
-
Gerwert, K., and F. Siebert. 1986. Evidence for light-induced 13-cis, 14-s-di isomerization in bacteriorhodopsin obtained by FTIR difference spectroscopy using isotopically labelled retinals. EMBO J. 5:805-811.
-
(1986)
EMBO J.
, vol.5
, pp. 805-811
-
-
Gerwert, K.1
Siebert, F.2
-
32
-
-
33751156797
-
Protein dynamics in the bacteriorhodopsin photocycle: A nanosecond step-scan FTIR investigation of the KL to L transition
-
Hage, W., M. Kim, H. Frei, and R. A. Mathies. 1996. Protein dynamics in the bacteriorhodopsin photocycle: a nanosecond step-scan FTIR investigation of the KL to L transition. J. Phys. Chem. 100:16026-16033.
-
(1996)
J. Phys. Chem.
, vol.100
, pp. 16026-16033
-
-
Hage, W.1
Kim, M.2
Frei, H.3
Mathies, R.A.4
-
33
-
-
0031021374
-
General concept for ion translocation by halobacterial retinal proteins - The isomerization/switch/transfer (1ST) model
-
Haupts, U., J. Tittor, E. Bamberg, and D. Oesterhelt. 1997. General concept for ion translocation by halobacterial retinal proteins - the isomerization/switch/transfer (1ST) model. Biochemistry. 36:2-7.
-
(1997)
Biochemistry.
, vol.36
, pp. 2-7
-
-
Haupts, U.1
Tittor, J.2
Bamberg, E.3
Oesterhelt, D.4
-
34
-
-
0026725522
-
Surface-bound optical probes monitor proton translocation and surface potential changes during the bacteriorhodopsin photocycle
-
Heberle, J., and N. A. Dencher. 1992. Surface-bound optical probes monitor proton translocation and surface potential changes during the bacteriorhodopsin photocycle. Proc. Natl. Acad Sci. USA. 89:5996-6000.
-
(1992)
Proc. Natl. Acad Sci. USA
, vol.89
, pp. 5996-6000
-
-
Heberle, J.1
Dencher, N.A.2
-
36
-
-
0030770570
-
Fourier transform infrared double-flash experiments resolve bacteriorhodopsin's M1 to M2 transition
-
Hessling, B., J. Herbst, R. Rammelsberg, and K. Gerwert. 1997. Fourier transform infrared double-flash experiments resolve bacteriorhodopsin's M1 to M2 transition. Biophys. J. 73:2071-2080.
-
(1997)
Biophys. J.
, vol.73
, pp. 2071-2080
-
-
Hessling, B.1
Herbst, J.2
Rammelsberg, R.3
Gerwert, K.4
-
37
-
-
0027429642
-
A model-independent approach to assigning bacteriorhodopsin's intramolecular reactions to photocycle intermediates
-
Hessling, B., G. Souvignier, and K. Gerwert. 1993. A model-independent approach to assigning bacteriorhodopsin's intramolecular reactions to photocycle intermediates. Biophys. J. 65:1929-1941.
-
(1993)
Biophys. J.
, vol.65
, pp. 1929-1941
-
-
Hessling, B.1
Souvignier, G.2
Gerwert, K.3
-
38
-
-
0024651574
-
Replacement of aspartic acid-96 by asparagine in bacteriorhodopsin slows both the decay of the M intermediate and the associated proton movement
-
Holz, M., L. A. Drachev, T. Mogi, H. Otto, A. D. Kaulen, M. P. Heyn, V. P. Skulachev, and H. G. Khorana. 1989. Replacement of aspartic acid-96 by asparagine in bacteriorhodopsin slows both the decay of the M intermediate and the associated proton movement. Proc. Natl. Acad. Sci. USA. 86:2167-2171.
-
(1989)
Proc. Natl. Acad. Sci. USA
, vol.86
, pp. 2167-2171
-
-
Holz, M.1
Drachev, L.A.2
Mogi, T.3
Otto, H.4
Kaulen, A.D.5
Heyn, M.P.6
Skulachev, V.P.7
Khorana, H.G.8
-
39
-
-
0344454010
-
Kinetic and molecular models for proton transport in bacteriorhodopsin
-
S. R. Caplan and M. Ginzburg, editors. Elsevier/North-Holland Biomedical Press, Amsterdam
-
Honig, B. H. 1978. Kinetic and molecular models for proton transport in bacteriorhodopsin. In Energetics and Structure of Halophilic Microorganisms. S. R. Caplan and M. Ginzburg, editors. Elsevier/North-Holland Biomedical Press, Amsterdam. 109-121.
-
(1978)
Energetics and Structure of Halophilic Microorganisms
, pp. 109-121
-
-
Honig, B.H.1
-
40
-
-
0030813030
-
The last phase of the reprotonation switch in bacteriorhodopsin: The transition between the M-type and the N-type protein conformations depends on hydration
-
Kamikubo, H., T. Oka, Y. Imamoto, F. Tokunaga, J. K. Lanyi, and M. Kataoka. 1997. The last phase of the reprotonation switch in bacteriorhodopsin: the transition between the M-type and the N-type protein conformations depends on hydration. Biochemistry. 36: 12282-12287.
-
(1997)
Biochemistry
, vol.36
, pp. 12282-12287
-
-
Kamikubo, H.1
Oka, T.2
Imamoto, Y.3
Tokunaga, F.4
Lanyi, J.K.5
Kataoka, M.6
-
41
-
-
0028148362
-
Energy coupling in an ion pump. The reprotonation switch of bacteriorhodopsin
-
Kataoka, M., H. Kamikubo, F. Tokunaga, L. S. Brown, Y. Yamazaki, A. Maeda, M. Sheves, R, Needleman, and J. K. Lanyi. 1994. Energy coupling in an ion pump. The reprotonation switch of bacteriorhodopsin. J. Mol. Biol. 243:621-638.
-
(1994)
J. Mol. Biol.
, vol.243
, pp. 621-638
-
-
Kataoka, M.1
Kamikubo, H.2
Tokunaga, F.3
Brown, L.S.4
Yamazaki, Y.5
Maeda, A.6
Sheves, M.7
Needleman, R.8
Lanyi, J.K.9
-
42
-
-
0027362929
-
pH dependence of light-induced proton release by bacteriorhodopsin
-
Kono, M., S. Misra, and T. G. Ebrey. 1993. pH dependence of light-induced proton release by bacteriorhodopsin. FEBS Lett. 331:31-34.
-
(1993)
FEBS Lett.
, vol.331
, pp. 31-34
-
-
Kono, M.1
Misra, S.2
Ebrey, T.G.3
-
43
-
-
0027769837
-
Proton translocation mechanism and energetics in the light-driven pump bacteriorhodopsin
-
Lanyi, J. K. 1993. Proton translocation mechanism and energetics in the light-driven pump bacteriorhodopsin. Biochim. Biophys. Acta. 1183: 241-261.
-
(1993)
Biochim. Biophys. Acta
, vol.1183
, pp. 241-261
-
-
Lanyi, J.K.1
-
44
-
-
0025308625
-
Light-induced currents from oriented purple membrane. I. Correlation of the microsecond component (B2) with the L → M photocycle transition
-
Liu, S. Y. 1990. Light-induced currents from oriented purple membrane. I. Correlation of the microsecond component (B2) with the L → M photocycle transition. Biophys. J. 57:943-950.
-
(1990)
Biophys. J.
, vol.57
, pp. 943-950
-
-
Liu, S.Y.1
-
45
-
-
84988159370
-
Time-resolved resonance raman studies of bacteriorhodopsin and its intermediates K590 and L550: Biological implications
-
Lohrmann, R., and M. Stockburger. 1992. Time-resolved resonance Raman studies of bacteriorhodopsin and its intermediates K590 and L550: biological implications. J. Raman Spectrosc. 23:575-583.
-
(1992)
J. Raman Spectrosc.
, vol.23
, pp. 575-583
-
-
Lohrmann, R.1
Stockburger, M.2
-
47
-
-
0025829307
-
From femtoseconds to biology: Mechanism of bacteriorhodopsin's light-driven proton pump
-
Mathies, R. A., S. W. Lin, J. B. Ames, and W. T. Pollard. 1991. From femtoseconds to biology: mechanism of bacteriorhodopsin's light-driven proton pump. Annu. Rev. Biophys. Biophys. Chem. 20:491-518.
-
(1991)
Annu. Rev. Biophys. Biophys. Chem.
, vol.20
, pp. 491-518
-
-
Mathies, R.A.1
Lin, S.W.2
Ames, J.B.3
Pollard, W.T.4
-
48
-
-
0025011266
-
Kinetic optimization of bacteriorhodopsin by aspartate 96 as an internal proton donor
-
Miller, A., and D. Oesterhelt. 1990. Kinetic optimization of bacteriorhodopsin by aspartate 96 as an internal proton donor. Biochim. Biophys. Acta. 1020:57-64.
-
(1990)
Biochim. Biophys. Acta
, vol.1020
, pp. 57-64
-
-
Miller, A.1
Oesterhelt, D.2
-
49
-
-
0030929840
-
Proton uptake and release are rate-limiting steps in the photocycle of the bacteriorhodopsin mutant E204Q
-
Misra, S., R. Govindjee, T. G. Ebrey, N. Chen, J.-X. Ma, and R. K. Crouch. 1997. Proton uptake and release are rate-limiting steps in the photocycle of the bacteriorhodopsin mutant E204Q. Biochemistry. 36:4875-4883.
-
(1997)
Biochemistry
, vol.36
, pp. 4875-4883
-
-
Misra, S.1
Govindjee, R.2
Ebrey, T.G.3
Chen, N.4
Ma, J.-X.5
Crouch, R.K.6
-
50
-
-
0026083378
-
Variance reduction by simultaneous multi-exponential analysis of data sets from different experiments
-
Müller, K.-H., and T. Plesser. 1991. Variance reduction by simultaneous multi-exponential analysis of data sets from different experiments. Ear. Biophys. J. 19:231-240.
-
(1991)
Ear. Biophys. J.
, vol.19
, pp. 231-240
-
-
Müller, K.-H.1
Plesser, T.2
-
51
-
-
0031982562
-
Voltage dependence of proton pumping by bacteriorhodopsin is regulated by voltage-sensitive ratio of Ml to M2
-
Nagel, G., B. Kelety, B. Möckel, G. B̈uildt, and E. Bamberg. 1998. Voltage dependence of proton pumping by bacteriorhodopsin is regulated by voltage-sensitive ratio of Ml to M2. Biophys. J. 74:403-412.
-
(1998)
Biophys. J.
, vol.74
, pp. 403-412
-
-
Nagel, G.1
Kelety, B.2
Möckel, B.3
B̈uildt, G.4
Bamberg, E.5
-
52
-
-
0026623260
-
A unifying concept for ion translocation by retinal proteins
-
Oesterhelt, D., J. Tittor, and E. Bamberg. 1992. A unifying concept for ion translocation by retinal proteins. J. Bioenerg. Biomembr. 24:181-191.
-
(1992)
J. Bioenerg. Biomembr.
, vol.24
, pp. 181-191
-
-
Oesterhelt, D.1
Tittor, J.2
Bamberg, E.3
-
53
-
-
0024317089
-
Aspartic acid-96 is the internal proton donor in the reprotonation of the Schiff base of bacteriorhodopsin
-
Otto, H., T. Marti, M. Holz, T. Mogi, M. Lindau, H. G. Khorana, and M. P. Heyn. 1989. Aspartic acid-96 is the internal proton donor in the reprotonation of the Schiff base of bacteriorhodopsinz Proc. Natl. Acad. Sci. USA. 86:9228-9232.
-
(1989)
Proc. Natl. Acad. Sci. USA
, vol.86
, pp. 9228-9232
-
-
Otto, H.1
Marti, T.2
Holz, M.3
Mogi, T.4
Lindau, M.5
Khorana, H.G.6
Heyn, M.P.7
-
54
-
-
0025868156
-
Fourier transform infrared study of the n intermediate of bacteriorhodopsin
-
Pfefferlé, J. M., A. Maeda, J. Sasaki, and T. Yoshizawa. 1991. Fourier transform infrared study of the N intermediate of bacteriorhodopsin. Biochemistry. 30:6548-6556.
-
(1991)
Biochemistry
, vol.30
, pp. 6548-6556
-
-
Pfefferlé, J.M.1
Maeda, A.2
Sasaki, J.3
Yoshizawa, T.4
-
55
-
-
0032492706
-
Bacteriorhodopsin's intramolecular proton-release pathway consists of a hydrogen-bonded network
-
Rammelsberg, R., G. Huhn, M. Lübben, and K. Gerwert. 1998. Bacteriorhodopsin's intramolecular proton-release pathway consists of a hydrogen-bonded network. Biochemistry. 37:5001-5009.
-
(1998)
Biochemistry
, vol.37
, pp. 5001-5009
-
-
Rammelsberg, R.1
Huhn, G.2
Lübben, M.3
Gerwert, K.4
-
56
-
-
0029665673
-
A linkage of the pKa's of asp-85 and glu-204 forms part of the reprotonation switch in bacteriorhodopsin
-
Richter, H. T., L. S. Brown, R. Needleman, and J. K. Lanyi. 1996a. A linkage of the pKa's of Asp-85 and Glu-204 forms part of the reprotonation switch in bacteriorhodopsin. Biochemistry. 35:4054-4062.
-
(1996)
Biochemistry
, vol.35
, pp. 4054-4062
-
-
Richter, H.T.1
Brown, L.S.2
Needleman, R.3
Lanyi, J.K.4
-
57
-
-
0029731742
-
Perturbed interaction between residues 85 and 204 in tyr-185 -> phe and asp-85 - Glu bacteriorhodopsin
-
Richter, H. T., R. Needleman, and J. K. Lanyi. 1996b. Perturbed interaction between residues 85 and 204 in Tyr-185 -> Phe and Asp-85 - Glu bacteriorhodopsin. Biophys. J. 71:3392-3398.
-
(1996)
Biophys. J.
, vol.71
, pp. 3392-3398
-
-
Richter, H.T.1
Needleman, R.2
Lanyi, J.K.3
-
58
-
-
0002338781
-
Improvements in signal acquisition and processing for time-resolved step-scan FT-IR spectroscopy
-
J. A. de Haseth, editor. American Institute of Physics, Woodbury, NY.
-
Rödig, C, and F. Siebert. 1998. Improvements in signal acquisition and processing for time-resolved step-scan FT-IR spectroscopy. In Fourier Transform Spectroscopy Eleventh International Conference. J. A. de Haseth, editor. American Institute of Physics, Woodbury, NY. 388-391.
-
(1998)
Fourier Transform Spectroscopy Eleventh International Conference
, pp. 388-391
-
-
Rödig, C.1
Siebert, F.2
-
59
-
-
0026643216
-
FTIR difference spectroscopy of bacteriorhodopsin: Toward a molecular model
-
Rothschild, K. J. 1992. FTIR difference spectroscopy of bacteriorhodopsin: toward a molecular model. J. Bioenerg. Biomembr. 24:147-167.
-
(1992)
J. Bioenerg. Biomembr.
, vol.24
, pp. 147-167
-
-
Rothschild, K.J.1
-
60
-
-
0028324569
-
Complete identification of C=O stretching vibrational bands of protonated aspartic acid residues in the difference infrared spectra of M and N intermediates versus bacteriorhodopsin
-
Sasaki, J., J. K. Lanyi, R. Needleman, T. Yoshizawa, and A. Maeda. 1994. Complete identification of C=O stretching vibrational bands of protonated aspartic acid residues in the difference infrared spectra of M and N intermediates versus bacteriorhodopsin. Biochemistry. 33:3178-3184.
-
(1994)
Biochemistry
, vol.33
, pp. 3178-3184
-
-
Sasaki, J.1
Lanyi, J.K.2
Needleman, R.3
Yoshizawa, T.4
Maeda, A.5
-
61
-
-
0027478957
-
Time-resolved infrared spectral analysis of the KL-to-L conversion in the photocycle of bacteriorhodopsin
-
Sasaki, J., A. Maeda, C. Kato, and H. Hamaguchi. 1993. Time-resolved infrared spectral analysis of the KL-to-L conversion in the photocycle of bacteriorhodopsin. Biochemistry. 32:867-871.
-
(1993)
Biochemistry
, vol.32
, pp. 867-871
-
-
Sasaki, J.1
Maeda, A.2
Kato, C.3
Hamaguchi, H.4
-
62
-
-
0026703071
-
p96 gt; asn bacteriorhodopsin: The MN intermediate with unprotonated schiff base but N-like protein structure
-
p96 gt; Asn bacteriorhodopsin: the MN intermediate with unprotonated Schiff base but N-like protein structure. J. Biol. Chem. 267: 20782-20786.
-
(1992)
J. Biol. Chem.
, vol.267
, pp. 20782-20786
-
-
Sasaki, J.1
Shichida, Y.2
Lanyi, J.K.3
Maeda, A.4
-
63
-
-
0031807513
-
Evidence for charge-controlled conformational changes in the photocycle of bacteriorhodopsin
-
Sass, H. J., R. Gessenich, M. H. J. Koch, D. Oesterhelt, N. A. Dencher, G. Büldt, and G. Rapp. 1998. Evidence for charge-controlled conformational changes in the photocycle of bacteriorhodopsin. Biophys. J. 75: 399-405.
-
(1998)
Biophys. J.
, vol.75
, pp. 399-405
-
-
Sass, H.J.1
Gessenich, R.2
Koch, M.H.J.3
Oesterhelt, D.4
Dencher, N.A.5
Büldt, G.6
Rapp, G.7
-
64
-
-
0030901231
-
The tertiary structural changes in bacteriorhodopsin occur between M states: X-ray diffraction and fourier transform infrared spectroscopy
-
Sass, H. J., I. W. Schachowa, G. Rapp, M. H. J. Koch, D. Oesterhelt, N. A. Dencher, and G. Büldt. 1997. The tertiary structural changes in bacteriorhodopsin occur between M states: x-ray diffraction and Fourier transform infrared spectroscopy. EMBO J. 16:1484-1491.
-
(1997)
EMBO J.
, vol.16
, pp. 1484-1491
-
-
Sass, H.J.1
Schachowa, I.W.2
Rapp, G.3
Koch, M.H.J.4
Oesterhelt, D.5
Dencher, N.A.6
Büldt, G.7
-
65
-
-
0017879924
-
A mechanism for the light driven proton pump of Halobacterium halobium
-
Schulten, K., and P. Tavan. 1978. A mechanism for the light driven proton pump of Halobacterium halobium. Nature. 272:85-86.
-
(1978)
Nature
, vol.272
, pp. 85-86
-
-
Schulten, K.1
Tavan, P.2
-
66
-
-
0021103472
-
Investigation of the primary photochemistry of bacteriorhodopsin by low-temperature fourier-transform infrared spectroscopy
-
Siebert, P., and W. Mantele. 1983. Investigation of the primary photochemistry of bacteriorhodopsin by low-temperature Fourier-transform infrared spectroscopy. Eur. J. Biochem. 130:565-573.
-
(1983)
Eur. J. Biochem.
, vol.130
, pp. 565-573
-
-
Siebert, P.1
Mantele, W.2
-
67
-
-
0002743109
-
Evidence for the protonation of two internal carboxyl groups during the photocycle of bacteriorhodopsin
-
Siebert, F., W. Mäntele, and W. Kreutz. 1982. Evidence for the protonation of two internal carboxyl groups during the photocycle of bacteriorhodopsin. FEES Lett. 141:82-87.
-
(1982)
FEES Lett.
, vol.141
, pp. 82-87
-
-
Siebert, F.1
Mäntele, W.2
Kreutz, W.3
-
68
-
-
0001268741
-
Vibrational analysis of the all-wans retinal chromophore in light adapted bacteriorhodopsin
-
Smith, S. O., M. S. Braiman, A. B. Meyers, J. A. Pardoen, J. M. L. Courtin, C. Winkel, J. Lugtenburg, and R. A. Mathies, 1987. Vibrational analysis of the all-wans retinal chromophore in light adapted bacteriorhodopsin. J. Am. Chem. Sac. 109:3108-3125.
-
(1987)
J. Am. Chem. Sac.
, vol.109
, pp. 3108-3125
-
-
Smith, S.O.1
Braiman, M.S.2
Meyers, A.B.3
Pardoen, J.A.4
Courtin, J.M.L.5
Winkel, C.6
Lugtenburg, J.7
Mathies, R.A.8
-
69
-
-
0030222328
-
Shuttling between two protein conformations: The common mechanism for sensory transduction and ion transport
-
Spudich, J. L., and J. K. Lanyi. 1996. Shuttling between two protein conformations: the common mechanism for sensory transduction and ion transport. Curr. Opin. Cell Biol. 8:452-457.
-
(1996)
Curr. Opin. Cell Biol.
, vol.8
, pp. 452-457
-
-
Spudich, J.L.1
Lanyi, J.K.2
-
70
-
-
0027999089
-
Inversion of proton translocation in bacteriorhodopsin mutants D85N, D85T, and D85.96N
-
Tittor, J., U. Schweiger, D. Oesterhelt, and E. Bamberg. 1994. Inversion of proton translocation in bacteriorhodopsin mutants D85N, D85T, and D85.96N. Biophys. J. 67:1682-1690.
-
(1994)
Biophys. J.
, vol.67
, pp. 1682-1690
-
-
Tittor, J.1
Schweiger, U.2
Oesterhelt, D.3
Bamberg, E.4
-
71
-
-
0000884183
-
Time-resolved FT-IR absorption spectroscopy using a step-scan interferometer
-
Uhmann, W., A. Becker, C. Taran, and F. Siebert. 1991. Time-resolved FT-IR absorption spectroscopy using a step-scan interferometer. Appl. Spectrosc. 45:390-397.
-
(1991)
Appl. Spectrosc.
, vol.45
, pp. 390-397
-
-
Uhmann, W.1
Becker, A.2
Taran, C.3
Siebert, F.4
-
72
-
-
0025230440
-
Pathways of the rise and decay of the M photointermediate(s) of bacteriorhodopsin
-
Váró, G., and J. K. Lanyi. 1990. Pathways of the rise and decay of the M photointermediate(s) of bacteriorhodopsin. Biochemistry. 29: 2241-2250.
-
(1990)
Biochemistry
, vol.29
, pp. 2241-2250
-
-
Váró, G.1
Lanyi, J.K.2
-
73
-
-
0026030204
-
Distortions in the photocycle of bacteriorhodopsin at moderate hydration
-
Váró, G., and J. K. Lanyi. 1991a. Distortions in the photocycle of bacteriorhodopsin at moderate hydration. Biophys. J. 59:313-322.
-
(1991)
Biophys. J.
, vol.59
, pp. 313-322
-
-
Váró, G.1
Lanyi, J.K.2
-
74
-
-
0025871066
-
Kinetic and spectroscopic evidence for an irreversible step between deprotonation and reprotonation of the schiff base in the bacteriorhodopsin photocycle
-
Váró, G., and J. K. Lanyi. 1991b. Kinetic and spectroscopic evidence for an irreversible step between deprotonation and reprotonation of the Schiff base in the bacteriorhodopsin photocycle. Biochemistry. 30: 50 08-5015.
-
(1991)
Biochemistry
, vol.30
, pp. 5008-5015
-
-
Váró, G.1
Lanyi, J.K.2
-
75
-
-
0025820289
-
Thermodynamics and energy coupling in the bacteriorhodopsin photocycle
-
V́aro, G., and J. K. Lanyi. 1991c. Thermodynamics and energy coupling in the bacteriorhodopsin photocycle. Biochemistry. 30:5016-5022.
-
(1991)
Biochemistry
, vol.30
, pp. 5016-5022
-
-
V́aro, G.1
Lanyi, J.K.2
-
76
-
-
0026561040
-
A residue substitution near the β-ionone ring of the retinal affects the M substates of bacteriorhodopsin
-
Váró, G., L. Zimányi, M. Chang, B. Ni, R. Needleman, and J. K. Lanyi. 1992. A residue substitution near the β-ionone ring of the retinal affects the M substates of bacteriorhodopsin. Biophys. J. 61:820-826.
-
(1992)
Biophys. J.
, vol.61
, pp. 820-826
-
-
Váró, G.1
Zimányi, L.2
Chang, M.3
Ni, B.4
Needleman, R.5
Lanyi, J.K.6
-
77
-
-
0028168332
-
Two progressive substates of the M-intermediate zan ze identified in glucose-embedded, wild-type bacteriorhodopsin
-
Vonck, J., B.-G. Han, F. Burkhard, G. A. Perkins, and R. M. Glaeser. 1994. Two progressive substates of the M-intermediate zan ze identified in glucose-embedded, wild-type bacteriorhodopsin. Biophys. J. 67: 1173-1178.
-
(1994)
Biophys. J.
, vol.67
, pp. 1173-1178
-
-
Vonck, J.1
Han, B.-G.2
Burkhard, F.3
Perkins, G.A.4
Glaeser, R.M.5
-
78
-
-
0028783570
-
The influence of the 9-methyl group of the retinal on the photocycle of bacteriorhodopsin studied by time-resolved rapid-scan and static low-temperature FT-IR difference spectroscopy
-
Weidlich, O., N. Friedman, M. Sheves, and F. Siebert. 1995. The influence of the 9-methyl group of the retinal on the photocycle of bacteriorhodopsin studied by time-resolved rapid-scan and static low-temperature FT-IR difference spectroscopy. Biochemistry. 34:13502-13510.
-
(1995)
Biochemistry
, vol.34
, pp. 13502-13510
-
-
Weidlich, O.1
Friedman, N.2
Sheves, M.3
Siebert, F.4
-
79
-
-
0029738907
-
Steric interactions between the 9-methyl group of the retinal and tryptophan 182 controls 13-cis to all-trans reisomerization and proton uptake in the bacteriorhodopsin photocycle
-
Weidlich, O., B. Schalt, N. Friedman, M. Sheves, J. K. Lanyi, L. S. Brown, and F. Siebert. 1996. Steric interactions between the 9-methyl group of the retinal and tryptophan 182 controls 13-cis to all-trans reisomerization and proton uptake in the bacteriorhodopsin photocycle. Biochemistry. 35:10807-10814.
-
(1996)
Biochemistry.
, vol.35
, pp. 10807-10814
-
-
Weidlich, O.1
Schalt, B.2
Friedman, N.3
Sheves, M.4
Lanyi, J.K.5
Brown, L.S.6
Siebert, F.7
-
80
-
-
0000005909
-
Time-resolved step-scan FT-IR investigations of the transition from KL to L in the bacteriorhodopsin photocycle: Identification of chromophore twists by assigning hydrogen-out-of-plane (HOOP) bending vibrations
-
Weidlich, O., and F. Siebert. 1993. Time-resolved step-scan FT-IR investigations of the transition from KL to L in the bacteriorhodopsin photocycle: identification of chromophore twists by assigning hydrogen-out-of-plane (HOOP) bending vibrations. Appl. Spectrosc. 47: 1394-1400.
-
(1993)
Appl. Spectrosc.
, vol.47
, pp. 1394-1400
-
-
Weidlich, O.1
Siebert, F.2
-
81
-
-
0027027299
-
The two consecutive M substates in the photocycle of bacteriorhodopsin are affected specifically by the D85N and D96N residue replacements
-
Zimányi, L., Y. Cao, M. Chang, B. Ni, R. Needleman, and J. K. Lanyi. 1992a. The two consecutive M substates in the photocycle of bacteriorhodopsin are affected specifically by the D85N and D96N residue replacements. Photochem. Photobiol. 56:1049-1055.
-
(1992)
Photochem. Photobiol.
, vol.56
, pp. 1049-1055
-
-
Zimányi, L.1
Cao, Y.2
Chang, M.3
Ni, B.4
Needleman, R.5
Lanyi, J.K.6
-
82
-
-
0026737320
-
Pathways of proton release in the bacteriorhodopsin photocycle
-
Zimányi, L., G. Váró, M. Chang, B. Ni, R. Needleman, and J. K. Lanyi. 1992b. Pathways of proton release in the bacteriorhodopsin photocycle. Biochemistry. 31:8535-8543.
-
(1992)
Biochemistry
, vol.31
, pp. 8535-8543
-
-
Zimányi, L.1
Váró, G.2
Chang, M.3
Ni, B.4
Needleman, R.5
Lanyi, J.K.6
-
83
-
-
0031553201
-
Infrared difference spectra of the intermediates L, M, N, and O of the bacteriorhodopsin photoreaction obtained by time-resolved attenuated total reflection spectroscopy
-
Zscherp, C., and J. Heberle. 1997. Infrared difference spectra of the intermediates L, M, N, and O of the bacteriorhodopsin photoreaction obtained by time-resolved attenuated total reflection spectroscopy. J. Phys. Chem. B. 101:1042-10547.
-
(1997)
J. Phys. Chem. B.
, vol.101
, pp. 1042-10547
-
-
Zscherp, C.1
Heberle, J.2
|