Steric interaction between the 9-methyl group of the retinal and tryptophan 182 controls 13-cis to all-trans reisomerization and proton uptake in the bacteriorhodopsin photocycle

Biochemistry

Volumn 35, Issue 33, 1996, Pages 10807-10814

  Weidlich, Olaf ^a,d   Schalt, Beate ^a   Friedman, Noga ^b   Sheves, Mordechai ^b   Lanyi, Janos K ^c   Brown, Leonid S ^c   Siebert, Friedrich ^a  

^a UNIVERSITY OF FREIBURG   (Germany)

^b WEIZMANN INSTITUTE OF SCIENCE   (Israel)

^c UNIVERSITY OF CALIFORNIA   (United States)

^d University of Arizona   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIORHODOPSIN; RETINAL; TRYPTOPHAN;

ARTICLE; CHROMATOPHORE; ENTROPY; ISOMERISM; PHOTOCHEMISTRY; PRIORITY JOURNAL; PROTON TRANSPORT; STEREOCHEMISTRY;

HALOBACTERIUM; HYDROGEN-ION CONCENTRATION; ISOMERISM; KINETICS; PHOTOCHEMISTRY; PROTONS; RETINALDEHYDE; SPECTROPHOTOMETRY, ULTRAVIOLET; SPECTROSCOPY, FOURIER TRANSFORM INFRARED; TRYPTOPHAN;

EID: 0029738907     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi960780h     Document Type: Article

References (51)

1. Alexiev, U., Mollaaghababa, R., Scherrer, P., Khorana, H. G., & Heyn, M. P. (1995) Proc. Natl. Acad. Sci. U.S.A. 92, 372-376.
2. Ames, J. B., & Mathias, R. A. (1990) Biochemistry 29, 7181-7190.
3. Brown, L. S., Bonet, L., Needleman, R., & Lanyi, J. K. (1993) Biophys. J. 65, 124-130.
4. Brown, L. S., Gat, Y., Sheves, M., Yamazaki, Y., Maeda, A., Needleman, R., & Lanyi, J. K. (1994a) Biochemistry 33, 12001-12011.
5. Brown, L. S., Yamazaki, Y., Maeda, A., Sun, L., Needleman, R., & Lanyi, J. K. (1994b) J. Mol. Biol. 239, 401-414.
6. Brown, L. S., Váró, G., Needleman, R., & Lanyi, J. K. (1995) Biophys. J. 69, 2103-2111.
7. Cao, Y., Brown, L. S., Needleman, R., & Lanyi, J. K. (1993a) Biochemistry 32, 10239-10248.
8. Cao, Y., Váró, G., Klinger, A. L., Czajkowski, D. M., Braiman, M. S., Needleman, R., & Lanyi, J. K. (1993b) Biochemistry 32, 1981-1990.
9. Delaney, J. K., Schweiger, U., & Subramaniam, S. (1995) Proc. Natl. Acad. Sci. U.S.A. 92, 11120-11124.
10. Dencher, N. A., Dresselhaus, D., Zaccai, G., & Büldt, G. (1989) Proc. Natl. Acad Sci. U.S.A. 86, 7876-7879.
11. Ebrey, T. G. (1993) in Thermodynamics of Membranes, Receptors and Channels (Jackson, M., Ed.) pp 353-387, CRC Press, Boca Raton, FL.
12. Eisfeld, W., Pusch, C., Diller, R., Lohrmann, R., & Stockburger, M. (1993) Biochemistry 32, 7196-7215.
13. Fahmy, K., Weidlich, O., Engelhard, M., Sigrist, H., & Siebert, F. (1993) Biochemistry 32, 5862-5869.
14. Farahbakhsh, Z. T., Hideg, K., & Hubbell, W. L. (1993) Science 262, 1416-1419.
15. Franke, R. R., König, B., Sakmar, T. P., Khorana, H. G., & Hofmann, K. P. (1990) Science 250, 123-125.
16. Friedman, N., Gat, Y., Sheves, M., & Ottolenghi, M. (1994) Biochemistry 33, 14758-14767.
17. Ganter, U. M., Schmid, E. D., Perez-Sala, D., Rando, R. R., & Siebert, F. (1989) Biochemistry 28, 5954-5962.
18. Ganter, U. M., Charitopoulos, T., Virmaux, N., & Siebert, F. (1992) Photochem. Photobiol. 56, 57-62.
19. Han, B.-G., Vonck, J., & Glaeser, R. M. (1994) Biophys. J. 67, 1179-1186.
20. Heberle, J., Riesle, J., Thiedemann, G., Oesterhelt, D., & Dencher, N. (1994) Nature 370, 379-382.
21. Henderson, R., Baldwin, J. M., Ceska, T. A., Zemlin, F., Beckmann, E., & Downing, K. H. (1990) J. Mol. Biol 213, 899-929.
22. Kataoka, M., Kamikubo, H., Tokunaga, F., Brown, L. S., Yamazaki, Y., Maeda, A., Sheves, M., Needleman, R., & Lanyi, J. K. (1994) J. Mol. Biol. 243, 621-638.
23. Koch, M. H. J., Dencher, N. A., Oesterhelt, D., Plöhn, H.-J., Rapp, G., & Büldt, G. (1991) EMBO J. 10, 521-526.
24. König, B., Arendt, A., McDowell, J. H., Kahlert, M., Hargrave, P. A., & Hofmann, K. P. (1989) Proc. Natl. Acad. Sci. U.S.A. 86, 6878-6882.
25. Krebs, M. P., & Khorana, H. G. (1993) J. Bacteriol. 175, 1555-1560.
26. Lanyi, J. K. (1992) J. Bioenerg. Biomembr. 24, 169-179.
27. Lanyi, J. K. (1993) Biochim. Biophys. Acta 1183, 241-261.
28. Lin-Vien, D., Colthup, N. B., Fateley, W. G., & Grasselli, J. G. (1991) in The handbook of infrared and Raman characteristic frequencies of organic molecules. Academic Press, Boston.
29. Ludlam, C. F. C., Sonar, S., Lee, C.-P., Coleman, M., Herzfeld, J., RajBhandary, U. L., & Rothschild, K. J. (1995) Biochemistry 34, 2-6.
30. Mathies, R. A., Lin, S. W., Ames, J. B., & Pollard, W. T. (1991) Annu. Rev. Biophys. Biophys. Chem. 20, 491-518.
31. Nakasako, M., Kataoka, M., Amemiya, Y., & Tokunaga, F. (1991) FEBS Lett. 292, 73-75.
32. Oesterhelt, D., Tittor, J., & Bamberg, E. (1992) J. Bioenerg. Biomembr. 24, 181-191.
33. Resek, J. F., Farahbakhsh, Z. T., Hubbell, W. L., & Khorana, H. G. (1993) Biochemistry 32, 12025-12032.
34. Roepe, P., Gray, D., Lugtenburg, J., Van den Berg, E. M. M., Herzfeld, J., & Rothschild, K. J. (1988) J. Am. Chem. Soc. 110, 7223-7224.
35. Rothschild, K. J. (1992) J. Bioenerg. Biomembr. 24, 147-167.
36. Rothschild, K. J., Gray, D., Mogi, T., Marti, T., Braiman, M. S., Stern, L. J., & Khorana, H. G. (1989) Biochemistry 28, 7052-7059.
37. Sasaki, J., Shichida, Y., Lanyi, J. K., & Maeda, A. (1992) J. Biol. Chem. 267, 20782-20786.
38. Schulenberg, P. J., Gärtner, W., & Braslavsky, S. E. (1994) Biochim. Biophys. Acta 1185, 92-96.
39. Song, L., Logunov, I., & El-Sayed, M. A. (1994) Biophys. J. 67, 2008-2012.
40. Steinhoff, H.-J., Mollaaghababa, R., Altenbach, C., Hideg, K., Krebs, M. P., Khorana, H. G., & Hubbell, W. L. (1994) Science 266, 105-107.
41. Steinhoff, H.-J., Mollaaghababa, R., Altenbach, C., Khorana, H. G., & Hubbell, W.L. (1995) Biophys. Chem. 56, 89-94.
42. Subramaniam, S., Gerstein, M., Oesterhelt, D., & Henderson, R. (1993) EMBO J. 12, 1-8.
43. Tittor, J., Schweiger, U., Oesterhelt, D., & Bamberg, E. (1994) Biophys. J. 67, 1682-1690.
44. Ulrich, A. S., Wallat, I., Heyn, M. P., & Watts, A. (1995) Nature, Struct. Biol. 2, 190-192.
45. Váró, G., & Lanyi, J. K. (1991) Biochemistry 30, 5008-5015.
46. Váró, G., & Lanyi, J. K. (1995) Biochemistry 34, 12161-12169.
47. Watts, A., Sternberg, B., Ulrich, A. S., Whiteway, C. A., Seifert, G., Sami, M., Fisher, P., Heyn, M. P., & Wallat, I. (1995) Biophys. Chem. 56, 41-46.
48. Weidlich, O., Friedman, N., Sheves, M., & Siebert, F. (1995) Biochemistry 34, 13502-13510.
49. Yamazaki, Y., Sasaki, J., Hatanaka, M., Kandori, H., Maeda, A., Needleman, R., Shinada, T., Yoshihara, K., Brown, L. S., & Lanyi, J. K. (1995) Biochemistry 34, 577-582.
50. Yan, B., Nakanishi, K., & Spudich, J. L. (1991) Proc. Natl. Acad. Sci. U.S.A. 88, 9412-9416.
51. Zimányi, L., Cao, Y., Needleman, R., Ottolenghi, M., & Lanyi, J. K. (1993) Biochemistry 32, 7669-7678.