Crystal structures of RbsD leading to the identification of cytoplasmic sugar-binding proteins with a novel folding architecture

Journal of Biological Chemistry

Volumn 278, Issue 30, 2003, Pages 28173-28180

  Kim, Min Sung ^a   Shin, Joon ^b   Lee, Weontae ^b   Lee, Heung Soo ^a   Oh, Byung Ha ^a  

^a Pohang University of Science and Technology (POSTECH)   (South Korea)

^b Yonsei University   (South Korea)

Author keywords

[No Author keywords available]

Indexed keywords

CRYSTAL STRUCTURE; ENZYMES; GENES; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; SUGARS;

SUGAR BINDING PROTEINS;

BIOCHEMISTRY;

CARBOHYDRATE BINDING PROTEIN; FUCOSE; PROTEIN RBSD; PROTEIN SUBUNIT; UNCLASSIFIED DRUG;

ARTICLE; CRYSTAL STRUCTURE; ENZYME ACTIVITY; NONHUMAN; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; NUCLEOTIDE SEQUENCE; OPERON; PRIORITY JOURNAL; PROTEIN ASSEMBLY; PROTEIN BINDING; PROTEIN FOLDING; PROTEIN FUNCTION; REGULON;

AMINO ACID SEQUENCE; BACILLUS SUBTILIS; BINDING SITES; CALORIMETRY; CRYSTALLOGRAPHY, X-RAY; CYTOPLASM; ESCHERICHIA COLI; FUCOSE; GLYCEROL; MAGNETIC RESONANCE SPECTROSCOPY; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; MONOSACCHARIDE TRANSPORT PROTEINS; POLYMERASE CHAIN REACTION; PROTEIN BINDING; PROTEIN FOLDING; PROTEIN STRUCTURE, SECONDARY; RIBOSE; SEQUENCE HOMOLOGY, AMINO ACID;

BACILLUS SUBTILIS;

EID: 0041344457     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.M304523200     Document Type: Article

References (27)

1. Willis, R. C., and Furlong, C. E. (1974) J. Biol. Chem. 249, 6926-6929
2. Furlong, C. E. (1982) Methods Enzymol. 90, 467-472
3. Buckel, S. D. (1986) J. Biol. Chem. 261, 7659-7662
4. Anderson, A., and Cooper, R. A. (1969) Biochim. Biophys. Acta 177, 163-165
5. Oh, H., Park, Y., and Park, C. (1999) J. Biol. Chem. 274, 14006-14011
6. Drew, K. N., Zajicek, J., Bondo, G., Bose, B., and Serianni, A. S. (1998) Carbohydr. Res. 307, 199-209
7. Sigrell, J. A., Cameron, A. D., Jones, T. A., and Mowbray, S. L. (1998) Structure 6, 183-193
8. Zhu, Y., and Lin, E. C. (1988) J. Bacteriol. 170, 2352-2358
9. Blattner, F. R., Plunkett, G., III, Bloch, C. A, Perna, N. T., Burland, V., Riley, M., Collado-Vides, J., Glasner, J. D., Rode, C. K., Mayhew, G. F., Gregor, J., Davis, N. W., Kirkpatrick, H. A., Goeden, M. A., Rose, D. J., Mau, B., and Shao, Y. (1997) Science 277, 1453-1474
10. McClelland, M., Sanderson, K. E., Spieth, J., Clifton, S. W., Latreille, P., Courtney, L., Porwollik, S., Ali, J., Dante, M., Du, F., Hou, S., Layman, D., Leonard, S., Nguyen, C., Scott, K., Holmes, A., Grewal, N., Mulvaney, E., Ryan, E., Sun, H., Florea, L., Miller, W., Stoneking, T., Nhan, M., Waterston, R., and Wilson, R. K. (2001) Nature 413, 852-856
11. Park, S. H., Pastuszak, I., Drake, R., and Elbein, A. D. (1998) J. Biol. Chem. 273, 5685-5691
12. Flowers, H. M. (1981) Adv. Carbohydr. Chem. Biochem. 39, 279-345
13. Chen, Y. M., Zhu, Y., and Lin, E. C. (1987) Mol. Gen. Genet. 210, 331-337
14. Kim, M. S., Oh, H., Park, C., and Oh, B. H. (2001) Acta Crystallogr. Sect. D Biol. Crystallogr. 57, 728-730
15. Otwinowski, Z., and Minor, W. (1997) Methods Enzymol. 276, 307-326
16. Terwilliger, T. C., and Berendzen, J. (1999) Acta Crystallogr. Sect. D Biol. Crystallogr. 55, 849-861
17. Terwilliger, T. C. (2000) Acta Crystallogr. Sect. D Biol. Crystallogr. 56, 965-972
18. Jones, T. A., Zou, J. Y., Cowan, S. W., and Kjeldgaard, M. (1991) Acta Crystallogr. Sect. A 47, 110-119
19. Brünger, A. T., Adams, P. D., Clore, G. M., DeLano, W. L., Gros, P., Grosse-Kunstleve, R. W., Jiang, J. S., Kuszewski, J., Nilges, M., Pannu, N. S., Read, R. J., Rice, L. M., Simonson, T., and Warren, G. L. (1998) Acta Crystallogr. Sect. D Biol. Crystallogr. 54, 905-921
20. Collaborative Computational Project Number 4 (1994) Acta Crystallogr. Sect. D Biol. Crystallogr. 50, 760-763
21. Holm, L., and Sanders, C. (1993) Trends Biochem. Sci. 20, 478-480
22. Andersson, C. E., and Mowbray, S. L. (2002) J. Mol. Biol. 315, 409-419
23. Bjorkman, A. J., and Mowbray, S. L. (1998) J. Mol. Biol. 279, 651-664
24. Bjorkman, A. J., Binnie, R. A., Zhang, H., Cole, L. B., Hermodson, M. A., and Mowbray, S. L. (1994) J. Biol. Chem. 269, 30206-30211
25. Gunn, F. J., Tate, C. G., Sansom, C. E., and Henderson, P. J. (1995) Mol. Microbiol, 15, 771-783
26. Esnouf, R. M. (1999) Acta Crystallogr. Sect. D Biol. Crystallogr. 55, 938-940
27. Hwang, T.-L., and Shaka, A. J. (1995) J. Magn. Reson. 112, 275-279