메뉴 건너뛰기




Volumn 20, Issue 4, 1999, Pages 413-422

Retrotransposon BARE-1: Expression of encoded proteins and formation of virus-like particles in barley cells

Author keywords

[No Author keywords available]

Indexed keywords

CAPSID PROTEIN; COMPLEMENTARY DNA; ENZYME ACTIVITY; INTEGRASE; MOLECULAR SIZE; PLANT GENOME; PROTEIN EXPRESSION; RETROPOSON; REVERSE TRANSCRIPTION; RNA DIRECTED DNA POLYMERASE; RNA TRANSLATION; VIRUS PARTICLE;

EID: 0039613875     PISSN: 09607412     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1365-313X.1999.00616.x     Document Type: Article
Times cited : (44)

References (50)
  • 1
    • 0027771223 scopus 로고
    • Inhibition of the wheat germ polymerase A activity by the antiviral drug HPA-23
    • Aoyama, H., Jucá, M.B., Castroviejo, M. and Litvak, S. (1993) Inhibition of the wheat germ polymerase A activity by the antiviral drug HPA-23. Plant Mol. Biol. 23, 1055-1060.
    • (1993) Plant Mol. Biol. , vol.23 , pp. 1055-1060
    • Aoyama, H.1    Jucá, M.B.2    Castroviejo, M.3    Litvak, S.4
  • 4
    • 0028789680 scopus 로고
    • Analysis of TYA protein regions necessary for formation of the Ty1 virus-like particle structure
    • Brookman, J.L., Stott, A.J., Cheeseman, P.J., Adamson, C.S., Holmes, D., Cole, J. and Burns, N.R. (1995) Analysis of TYA protein regions necessary for formation of the Ty1 virus-like particle structure. Virology, 21, 69-76.
    • (1995) Virology , vol.21 , pp. 69-76
    • Brookman, J.L.1    Stott, A.J.2    Cheeseman, P.J.3    Adamson, C.S.4    Holmes, D.5    Cole, J.6    Burns, N.R.7
  • 5
    • 0029643858 scopus 로고    scopus 로고
    • The catalytic domain of avian sarcoma virus integrase: Conformation of the active site residues in the presence of divalent cations
    • Bujacz, G., Jaskolski, M., Alexandratos, J., Wlodawer, A., Merkel, G., Katz, R.A. and Skalka, A.M. (1996) The catalytic domain of avian sarcoma virus integrase: conformation of the active site residues in the presence of divalent cations. Structure, 4, 89-96.
    • (1996) Structure , vol.4 , pp. 89-96
    • Bujacz, G.1    Jaskolski, M.2    Alexandratos, J.3    Wlodawer, A.4    Merkel, G.5    Katz, R.A.6    Skalka, A.M.7
  • 6
    • 0026591664 scopus 로고
    • Symmetry, flexibility and permeability in the structure of yeast retrotransposon virus-like particles
    • Burns, N.R., Saibil, H.R., White, N.S. et al. (1992) Symmetry, flexibility and permeability in the structure of yeast retrotransposon virus-like particles. EMBO J. 11, 1155-1164.
    • (1992) EMBO J. , vol.11 , pp. 1155-1164
    • Burns, N.R.1    Saibil, H.R.2    White, N.S.3
  • 7
    • 0028584269 scopus 로고
    • Crystal structure of the catalytic domain of HIV-1 integrase: Similarity to other polynucleotidyl transferases
    • Dyda, F., Hickman, A.B., Jenkins, T.M., Engelman, A., Craigie, R. and Davies, D.R. (1994) Crystal structure of the catalytic domain of HIV-1 integrase: similarity to other polynucleotidyl transferases. Science, 266, 1981-1986.
    • (1994) Science , vol.266 , pp. 1981-1986
    • Dyda, F.1    Hickman, A.B.2    Jenkins, T.M.3    Engelman, A.4    Craigie, R.5    Davies, D.R.6
  • 8
    • 0024295403 scopus 로고
    • The DNA intermediate in yeast Ty1 element transposition copurifies with virus-like particles: Cell-free Ty1 transposition
    • Eichinger, D.J. and Boeke, J.D. (1988) The DNA intermediate in yeast Ty1 element transposition copurifies with virus-like particles: cell-free Ty1 transposition. Cell, 54, 955-966.
    • (1988) Cell , vol.54 , pp. 955-966
    • Eichinger, D.J.1    Boeke, J.D.2
  • 9
    • 0021881958 scopus 로고
    • The nucleotide sequences of copia and copia-related RNA in Drosophila virus-like particles
    • Emori, Y., Shiba, T., Kanaya, S., Yuki, S. and Saigo, K. (1985) The nucleotide sequences of copia and copia-related RNA in Drosophila virus-like particles. Nature, 315, 773-776.
    • (1985) Nature , vol.315 , pp. 773-776
    • Emori, Y.1    Shiba, T.2    Kanaya, S.3    Yuki, S.4    Saigo, K.5
  • 10
    • 0026516955 scopus 로고
    • Extreme heterogeneity of Ty1-copia group retrotransposons in plants
    • Flavell, A.J., Smith, D.B. and Kumar, A. (1992) Extreme heterogeneity of Ty1-copia group retrotransposons in plants. Mol. Gen. Genet. 231, 233-242.
    • (1992) Mol. Gen. Genet. , vol.231 , pp. 233-242
    • Flavell, A.J.1    Smith, D.B.2    Kumar, A.3
  • 11
    • 0031711593 scopus 로고    scopus 로고
    • HIV-1: Fifteen proteins and an RNA
    • Frankel, A.D. and Young, J.A. (1998) HIV-1: fifteen proteins and an RNA. Annu. Rev. Biochem. 67, 1-25.
    • (1998) Annu. Rev. Biochem. , vol.67 , pp. 1-25
    • Frankel, A.D.1    Young, J.A.2
  • 12
    • 0026544795 scopus 로고
    • Retroelements in higher plants. Trends
    • Grandbastien, M.-A. (1992) Retroelements in higher plants. Trends Genet. 8, 103-108.
    • (1992) Genet. , vol.8 , pp. 103-108
    • Grandbastien, M.-A.1
  • 13
    • 0031439952 scopus 로고    scopus 로고
    • The expression of the tobacco Tnt1 retrotransposon is linked to plant defense responses
    • Grandbastien, M.-A., Lucas, H., Morel, J., Mhiri, C., Vernhettes, S. and Casacuberta, J.M. (1997) The expression of the tobacco Tnt1 retrotransposon is linked to plant defense responses. Genetica, 100, 241-252.
    • (1997) Genetica , vol.100 , pp. 241-252
    • Grandbastien, M.-A.1    Lucas, H.2    Morel, J.3    Mhiri, C.4    Vernhettes, S.5    Casacuberta, J.M.6
  • 15
    • 0031680632 scopus 로고    scopus 로고
    • Proteolytic processing and assembly of gag and gag-pol proteins of TED, a baculovirus-associated retrotransposon of the gypsy family
    • Hajek, K.L. and Friesen, P.D. (1998) Proteolytic processing and assembly of gag and gag-pol proteins of TED, a baculovirus-associated retrotransposon of the gypsy family. J. Virol. 72, 8718-8724.
    • (1998) J. Virol. , vol.72 , pp. 8718-8724
    • Hajek, K.L.1    Friesen, P.D.2
  • 16
    • 0030804306 scopus 로고    scopus 로고
    • Developmental expression analysis of the 1731 retrotransposon reveals an enhancement of Gag-Pol frameshifting in males of Drosophila melanogaster
    • Haoudi, A., Rachidi, M., Kim, M.H., Champion, S., Best-Belpomme, M. and Maisonhaute, C. (1997) Developmental expression analysis of the 1731 retrotransposon reveals an enhancement of Gag-Pol frameshifting in males of Drosophila melanogaster. Gene, 196, 82-93.
    • (1997) Gene , vol.196 , pp. 82-93
    • Haoudi, A.1    Rachidi, M.2    Kim, M.H.3    Champion, S.4    Best-Belpomme, M.5    Maisonhaute, C.6
  • 17
    • 0027168422 scopus 로고
    • Activation of tobacco retrotransposons during tissue culture
    • Hirochika, H. (1993) Activation of tobacco retrotransposons during tissue culture. EMBO J. 12, 2521-2528.
    • (1993) EMBO J. , vol.12 , pp. 2521-2528
    • Hirochika, H.1
  • 19
    • 0032943978 scopus 로고    scopus 로고
    • IRAP and REMAP: Two new retrotransposon-based DNA fingerprinting techniques
    • Kalendar, R., Grob, T., Regina, M., Suoniemi, A. and Schulman, A.H. (1999) IRAP and REMAP: two new retrotransposon-based DNA fingerprinting techniques. Theor. Appl. Genet. 98, 704-711.
    • (1999) Theor. Appl. Genet. , vol.98 , pp. 704-711
    • Kalendar, R.1    Grob, T.2    Regina, M.3    Suoniemi, A.4    Schulman, A.H.5
  • 20
    • 0027458463 scopus 로고
    • Proteolytic processing of Ty3 proteins is required for transposition
    • Kirchner, J. and Sandmeyer, S. (1993) Proteolytic processing of Ty3 proteins is required for transposition. J. Virol. 67, 19-28.
    • (1993) J. Virol. , vol.67 , pp. 19-28
    • Kirchner, J.1    Sandmeyer, S.2
  • 21
    • 0029001089 scopus 로고
    • RNA-mediated transposition of the tobacco retrotransposon Tnt1 in arabidopsis thaliana
    • Lucas, H., Feuerbach, F., Kunert, K., Grandbastien, M.-A. and Caboche, M. (1995) RNA-mediated transposition of the tobacco retrotransposon Tnt1 in Arabidopsis thaliana. EMBO J. 14, 2364-2373.
    • (1995) EMBO J. , vol.14 , pp. 2364-2373
    • Lucas, H.1    Feuerbach, F.2    Kunert, K.3    Grandbastien, M.-A.C.M.4
  • 22
    • 0027651273 scopus 로고
    • BARE-1, a copia-like retroelement in barley (Hordeum vulgare L.)
    • Manninen, I. and Schulman, A.H. (1993) BARE-1, a copia-like retroelement in barley (Hordeum vulgare L.). Plant Mol. Biol. 22, 829-846.
    • (1993) Plant Mol. Biol. , vol.22 , pp. 829-846
    • Manninen, I.1    Schulman, A.H.2
  • 25
    • 0029974928 scopus 로고    scopus 로고
    • A critical proteolytic cleavage site near the C terminus of the yeast retrotransposon Ty1 Gag protein
    • Merkulov, G.V., Swiderek, K.M., Brachmann, C.B. and Boeke, J.D. (1996) A critical proteolytic cleavage site near the C terminus of the yeast retrotransposon Ty1 Gag protein. J. Virol. 70, 5548-5556.
    • (1996) J. Virol. , vol.70 , pp. 5548-5556
    • Merkulov, G.V.1    Swiderek, K.M.2    Brachmann, C.B.3    Boeke, J.D.4
  • 26
    • 0030152384 scopus 로고    scopus 로고
    • A reverse transcriptase activity in potato mitochondria
    • Moenne, A., Bégu, D. and Jordanna, X. (1996) A reverse transcriptase activity in potato mitochondria. Plant Mol. Biol. 31, 365-372.
    • (1996) Plant Mol. Biol. , vol.31 , pp. 365-372
    • Moenne, A.1    Bégu, D.2    Jordanna, X.3
  • 27
    • 0031878384 scopus 로고    scopus 로고
    • In vivo Ty1 reverse transcription can generate replication intermediates with untidy ends
    • Mules, E.H., Uzun, O. and Gabriel, A. (1998) In vivo Ty1 reverse transcription can generate replication intermediates with untidy ends. J. Virol. 72, 6490-6503.
    • (1998) J. Virol. , vol.72 , pp. 6490-6503
    • Mules, E.H.1    Uzun, O.2    Gabriel, A.3
  • 29
    • 0029986858 scopus 로고    scopus 로고
    • The Ty1-copia group of retrotransposons in Vicia species: Copy number, sequence heterogeneity and chromosomal localisation
    • Pearce, S.R., Harrison, G., Li, D., Heslop-Harrison, J.S., Kumar, A. and Flavell, A.J. (1996) The Ty1-copia group of retrotransposons in Vicia species: copy number, sequence heterogeneity and chromosomal localisation. Mol. Gen. Genet. 205, 305-315.
    • (1996) Mol. Gen. Genet. , vol.205 , pp. 305-315
    • Pearce, S.R.1    Harrison, G.2    Li, D.3    Heslop-Harrison, J.S.4    Kumar, A.5    Flavell, A.J.6
  • 30
    • 0027317654 scopus 로고
    • Biochemical and electron microscope analyses of the DNA reverse transcripts present in the virus-like particles of the yeast transposon Ty1. Identification of a second origin of Ty1 DNA plus strand synthesis
    • Pochart, P., Agoutin, B., Rousset, S., Chanet, R., Doroszkiewicz, V. and Heyman, T. (1993) Biochemical and electron microscope analyses of the DNA reverse transcripts present in the virus-like particles of the yeast transposon Ty1. Identification of a second origin of Ty1 DNA plus strand synthesis. Nucl. Acids Res. 21, 3513-3520.
    • (1993) Nucl. Acids Res. , vol.21 , pp. 3513-3520
    • Pochart, P.1    Agoutin, B.2    Rousset, S.3    Chanet, R.4    Doroszkiewicz, V.5    Heyman, T.6
  • 31
    • 0025847497 scopus 로고
    • Specific expression of the tobacco Tnt1 retrotransposon in protoplasts
    • Pouteau, S., Huttner, E., Grandbastien, M.-A. and Caboche, M. (1991) Specific expression of the tobacco Tnt1 retrotransposon in protoplasts. EMBO J. 10, 1911-1918.
    • (1991) EMBO J. , vol.10 , pp. 1911-1918
    • Pouteau, S.1    Huttner, E.2    Grandbastien, M.-A.3    Caboche, M.4
  • 33
    • 0030052139 scopus 로고    scopus 로고
    • A retrotransposon-like sequence linked to the S-locus of Nicotians alata is expressed in styles in response to touch
    • Royo, J., Nass, N., Matton, D.P., Okamoto, S., Clarke, A.E. and Newbigin, E. (1996) A retrotransposon-like sequence linked to the S-locus of Nicotians alata is expressed in styles in response to touch. Mol. Gen. Genet. 250, 180-188.
    • (1996) Mol. Gen. Genet. , vol.250 , pp. 180-188
    • Royo, J.1    Nass, N.2    Matton, D.P.3    Okamoto, S.4    Clarke, A.E.5    Newbigin, E.6
  • 34
    • 0028425479 scopus 로고
    • The aspartic proteinase of barley is a vacuolar enzyme that processes probarley lectin in vitro
    • Runeberg-Roos, P., Kervinen, J., Kovaleva, V., Raikhel, N. and Gal, S. (1994) The aspartic proteinase of barley is a vacuolar enzyme that processes probarley lectin in vitro. Plant Physiol. 105, 321-329.
    • (1994) Plant Physiol. , vol.105 , pp. 321-329
    • Runeberg-Roos, P.1    Kervinen, J.2    Kovaleva, V.3    Raikhel, N.4    Gal, S.5
  • 35
    • 23444454614 scopus 로고
    • Extraordinarily polymorphic microsatellite DNA in barley: Species diversity, chromosomal locations, and population dynamics
    • Saghai Maroof, M.A., Biyashev, R.M., Yang, G.P., Zhang, Q. and Allard, R.W. (1994) Extraordinarily polymorphic microsatellite DNA in barley: species diversity, chromosomal locations, and population dynamics. Proc. Natl Acad. Sci. USA, 91, 5466-5470.
    • (1994) Proc. Natl Acad. Sci. USA , vol.91 , pp. 5466-5470
    • Saghai Maroof, M.A.1    Biyashev, R.M.2    Yang, G.P.3    Zhang, Q.4    Allard, R.W.5
  • 37
    • 0013630297 scopus 로고    scopus 로고
    • Nested retrotransposons in the intergenic regions of the maize genome
    • SanMiguel, P., Tikhonov, A., Jin, Y.K. et al. (1996) Nested retrotransposons in the intergenic regions of the maize genome. Science, 274, 765-768.
    • (1996) Science , vol.274 , pp. 765-768
    • Sanmiguel, P.1    Tikhonov, A.2    Jin, Y.K.3
  • 38
    • 0032104326 scopus 로고    scopus 로고
    • Purification and characterization of a 100 kDa DNA polymerase from cauliflower inflorescence
    • Seto, H., Hatanaka, M., Kimura, S. et al. (1998) Purification and characterization of a 100 kDa DNA polymerase from cauliflower inflorescence. Biochem. J. 332, 557-563.
    • (1998) Biochem. J. , vol.332 , pp. 557-563
    • Seto, H.1    Hatanaka, M.2    Kimura, S.3
  • 39
    • 0020663784 scopus 로고
    • Retrovirus-like particles containing RNA homologoues to the transposable element copia in Drosophila melanogaster
    • Shiba, T. and Saigo, K. (1983) Retrovirus-like particles containing RNA homologoues to the transposable element copia in Drosophila melanogaster. Nature, 302, 119-124.
    • (1983) Nature , vol.302 , pp. 119-124
    • Shiba, T.1    Saigo, K.2
  • 40
    • 0030106262 scopus 로고    scopus 로고
    • Retrotransposon BARE-1 is a major, dispersed component of the barley (Hordeum vulgare L.) genome
    • Suoniemi, A., Anamthawat-Jónsson, K., Arna, T. and Schulman, A.H. (1996a) Retrotransposon BARE-1 is a major, dispersed component of the barley (Hordeum vulgare L.) genome. Plant Mol. Biol. 30, 1321-1329.
    • (1996) Plant Mol. Biol. , vol.30 , pp. 1321-1329
    • Suoniemi, A.1    Anamthawat-Jónsson, K.2    Arna, T.3    Schulman, A.H.4
  • 41
    • 0030152180 scopus 로고    scopus 로고
    • The BARE-1 retrotransposon is transcribed in barley from an LTR promoter active in transient assays
    • Suoniemi, A., Narvanto, A. and Schulman, A. (1996b) The BARE-1 retrotransposon is transcribed in barley from an LTR promoter active in transient assays. Plant Mol. Biol. 31, 295-306.
    • (1996) Plant Mol. Biol. , vol.31 , pp. 295-306
    • Suoniemi, A.1    Narvanto, A.2    Schulman, A.3
  • 42
    • 0031438187 scopus 로고    scopus 로고
    • BARE-1 insertion site preferences and evolutionary conservation of RNA and cDNA processing sites
    • Suoniemi, A., Schmidt, D. and Schulman, A.H. (1997) BARE-1 insertion site preferences and evolutionary conservation of RNA and cDNA processing sites. Genetica, 100, 219-230.
    • (1997) Genetica , vol.100 , pp. 219-230
    • Suoniemi, A.1    Schmidt, D.2    Schulman, A.H.3
  • 43
    • 0031874963 scopus 로고    scopus 로고
    • The core domain of retrotransposon integrase in Hordeum: Predicted structure and evolution
    • Suoniemi, A., Tanskanen, J., Pentikäinen, O., Johnson, M.S. and Schulman, A.H. (1998a) The core domain of retrotransposon integrase in Hordeum: predicted structure and evolution. Mol. Biol. Evol. 9, 1135-1144.
    • (1998) Mol. Biol. Evol. , vol.9 , pp. 1135-1144
    • Suoniemi, A.1    Tanskanen, J.2    Pentikäinen, O.3    Johnson, M.S.4    Schulman, A.H.5
  • 44
    • 0032033103 scopus 로고    scopus 로고
    • Gypsy-like retrotransposons are widespread in the plant kingdom
    • Suoniemi, A., Tanskanen, J. and Schulman, A.H. (1998b) Gypsy-like retrotransposons are widespread in the plant kingdom. Plant J. 13, 699-705.
    • (1998) Plant J. , vol.13 , pp. 699-705
    • Suoniemi, A.1    Tanskanen, J.2    Schulman, A.H.3
  • 45
    • 0027278062 scopus 로고
    • Presence of the gypsy (MDG4) retrotransposon in extracellular virus-like particles
    • Syomin, B.V., Kandror, K.V., Semakin, A.B., Tsuprun, V.L. and Stepanov, A.S. (1993) Presence of the gypsy (MDG4) retrotransposon in extracellular virus-like particles. FEBS Lett. 323, 285-288.
    • (1993) FEBS Lett. , vol.323 , pp. 285-288
    • Syomin, B.V.1    Kandror, K.V.2    Semakin, A.B.3    Tsuprun, V.L.4    Stepanov, A.S.5
  • 47
    • 0027508067 scopus 로고
    • Yeast retrotransposons and tRNAs
    • Voytas, D.F. and Boeke, J.D. (1993) Yeast retrotransposons and tRNAs. Trends Genet. 9, 421-426.
    • (1993) Trends Genet. , vol.9 , pp. 421-426
    • Voytas, D.F.1    Boeke, J.D.2
  • 49
    • 0030991387 scopus 로고    scopus 로고
    • Genetic distribution of BARE-1-like retrotransposable elements in the barley genome revealed by sequence-specific amplification polymorphisms (S-SAP)
    • Waugh, R., McLean, K., Flavell, A.J., Pearce, S.R., Kumar, A., Thomas, B.B.T. and Powell, W. (1997) Genetic distribution of BARE-1-like retrotransposable elements in the barley genome revealed by sequence-specific amplification polymorphisms (S-SAP). Mol. Gen. Genet. 253, 687-694.
    • (1997) Mol. Gen. Genet. , vol.253 , pp. 687-694
    • Waugh, R.1    McLean, K.2    Flavell, A.J.3    Pearce, S.R.4    Kumar, A.5    Thomas, B.B.T.6    Powell, W.7
  • 50
    • 0023930757 scopus 로고
    • In vitro mutagenesis identifies a region within the envelope gene of the human immunodeficiency virus that is critical for infectivity
    • Willey, R.L., Smith, D.H.L.A.L., Theodore, T.S., Earl, P.L., Moss, B., Capon, D.J. and Martin, M.A. (1988) In vitro mutagenesis identifies a region within the envelope gene of the human immunodeficiency virus that is critical for infectivity. J. Virol. 62, 139-147.
    • (1988) J. Virol. , vol.62 , pp. 139-147
    • Willey, R.L.1    Smith, D.H.L.A.L.2    Theodore, T.S.3    Earl, P.L.4    Moss, B.5    Capon, D.J.6    Martin, M.A.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.