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Volumn 31, Issue 9, 2003, Pages 2353-2360

The enigmatic mitochondrial ORF ymf39 codes for ATP synthase chain b

Author keywords

[No Author keywords available]

Indexed keywords

GENE PRODUCT; PROTEIN SUBUNIT; PROTON TRANSPORTING ADENOSINE TRIPHOSPHATE SYNTHASE; PROTOZOAL DNA; PROTOZOAL PROTEIN;

EID: 0038750910     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/gkg326     Document Type: Article
Times cited : (34)

References (53)
  • 3
    • 0019983804 scopus 로고
    • Complete sequence of bovine mitochondrial DNA. Conserved features of the mammalian mitochondrial genome
    • Anderson,S., de Bruijn,M.H., Coulson,A.R., Eperon,I.C., Sanger,F. and Young,I.G. (1982) Complete sequence of bovine mitochondrial DNA. Conserved features of the mammalian mitochondrial genome. J. Mol. Biol., 156, 683-717.
    • (1982) J. Mol. Biol. , vol.156 , pp. 683-717
    • Anderson, S.1    de Bruijn, M.H.2    Coulson, A.R.3    Eperon, I.C.4    Sanger, F.5    Young, I.G.6
  • 5
    • 0021866528 scopus 로고
    • Six unidentified reading frames of human mitochondrial DNA encode components of the respiratory-chain NADH dehydrogenase
    • Chomyn,A., Mariottini,P., Cleeter,M.W., Ragan,C.I., Matsuno-Yagi,A., Hatefi,Y., Doolittle,R.F. and Attardi,G. (1985) Six unidentified reading frames of human mitochondrial DNA encode components of the respiratory-chain NADH dehydrogenase. Nature, 314, 592-597.
    • (1985) Nature , vol.314 , pp. 592-597
    • Chomyn, A.1    Mariottini, P.2    Cleeter, M.W.3    Ragan, C.I.4    Matsuno-Yagi, A.5    Hatefi, Y.6    Doolittle, R.F.7    Attardi, G.8
  • 6
    • 0023032242 scopus 로고
    • URF6, last unidentified reading frame of human mtDNA, codes for an NADH dehydrogenase subunit
    • Chomyn,A., Cleeter,M.W., Ragan,C.I., Riley,M., Doolittle,R.F. and Attardi,G. (1986) URF6, last unidentified reading frame of human mtDNA, codes for an NADH dehydrogenase subunit. Science, 234, 614-618.
    • (1986) Science , vol.234 , pp. 614-618
    • Chomyn, A.1    Cleeter, M.W.2    Ragan, C.I.3    Riley, M.4    Doolittle, R.F.5    Attardi, G.6
  • 7
    • 0031021278 scopus 로고    scopus 로고
    • The mitochondrial genome of Arabidopsis thaliana contains 57 genes in 366,924 nucleotides
    • Unseld,M., Marienfeld,J.R., Brandt,P. and Brennicke,A. (1997) The mitochondrial genome of Arabidopsis thaliana contains 57 genes in 366,924 nucleotides. Nature Genet., 15, 57-61.
    • (1997) Nature Genet. , vol.15 , pp. 57-61
    • Unseld, M.1    Marienfeld, J.R.2    Brandt, P.3    Brennicke, A.4
  • 8
    • 0032740766 scopus 로고    scopus 로고
    • The mitochondrial genome of Arabidopsis is composed of both native and immigrant information
    • Marienfeld,J., Unseld,M. and Brennicke,A. (1999) The mitochondrial genome of Arabidopsis is composed of both native and immigrant information. Trends Plant Sci., 4, 495-502.
    • (1999) Trends Plant Sci. , vol.4 , pp. 495-502
    • Marienfeld, J.1    Unseld, M.2    Brennicke, A.3
  • 9
    • 0033367329 scopus 로고    scopus 로고
    • Mitochondrial genome evolution and the origin of eukaryotes
    • Lang,B.F., Gray,M.W. and Burger,G. (1999) Mitochondrial genome evolution and the origin of eukaryotes. Annu. Rev. Genet., 33, 351-497.
    • (1999) Annu. Rev. Genet. , vol.33 , pp. 351-497
    • Lang, B.F.1    Gray, M.W.2    Burger, G.3
  • 10
    • 0030812487 scopus 로고    scopus 로고
    • Homing endonucleases: Keeping the house in order
    • Belfort,M. and Roberts,R.J. (1997) Homing endonucleases: keeping the house in order. Nucleic Acids Res., 25, 3379-3388.
    • (1997) Nucleic Acids Res. , vol.25 , pp. 3379-3388
    • Belfort, M.1    Roberts, R.J.2
  • 11
    • 0029066770 scopus 로고
    • Structure and activities of group II introns
    • Michel,F. and Ferat,J.L. (1995) Structure and activities of group II introns. Annu. Rev. Biochem., 64, 435-461.
    • (1995) Annu. Rev. Biochem. , vol.64 , pp. 435-461
    • Michel, F.1    Ferat, J.L.2
  • 12
    • 0028856062 scopus 로고
    • Natural plasmids of filamentous fungi
    • Griffith,A.J. (1995) Natural plasmids of filamentous fungi. Microbiol. Rev., 59, 673-685.
    • (1995) Microbiol. Rev. , vol.59 , pp. 673-685
    • Griffith, A.J.1
  • 13
    • 0034255666 scopus 로고    scopus 로고
    • A novel motif for identifying rps3 homologs in fungal mitochondrial genomes
    • Bullerwell,C.E., Burger,G. and Lang,B.F. (2000) A novel motif for identifying rps3 homologs in fungal mitochondrial genomes. Trends Biochem. Sci., 25, 363-365.
    • (2000) Trends Biochem. Sci. , vol.25 , pp. 363-365
    • Bullerwell, C.E.1    Burger, G.2    Lang, B.F.3
  • 14
    • 0032541133 scopus 로고    scopus 로고
    • An essential component of a novel bacterial protein export system with homologues in plastids and mitochondria
    • Bogsch,E.G., Sargent,F., Stanley,N.R., Berks,B.C., Robinson,C. and Palmer T. (1998) An essential component of a novel bacterial protein export system with homologues in plastids and mitochondria. J. Biol. Chem., 273, 18003-18006.
    • (1998) J. Biol. Chem. , vol.273 , pp. 18003-18006
    • Bogsch, E.G.1    Sargent, F.2    Stanley, N.R.3    Berks, B.C.4    Robinson, C.5    Palmer, T.6
  • 15
    • 0032478550 scopus 로고    scopus 로고
    • A novel and ubiquitous system for membrane targeting and secretion of cofactor-containing proteins
    • Weiner,J.H., Bilous,P.T., Shaw,G.M., Lubitz,S.P., Frost,L., Thomas,G.H., Cole,J.A. and Turner,R.J. (1998) A novel and ubiquitous system for membrane targeting and secretion of cofactor-containing proteins. Cell, 93, 93-101.
    • (1998) Cell , vol.93 , pp. 93-101
    • Weiner, J.H.1    Bilous, P.T.2    Shaw, G.M.3    Lubitz, S.P.4    Frost, L.5    Thomas, G.H.6    Cole, J.A.7    Turner, R.J.8
  • 16
    • 0026558482 scopus 로고
    • Gene organization deduced from the complete sequence of liverwort Marchantia polymorpha mitochondrial DNA. A primitive form of plant mitochondrial genome
    • Oda,K., Yamato,K., Ohta,E., Nakamura,Y., Takemura,M., Nozato,N., Ajashi,K., Kanegae,T., Ogura,Y., Kohchi,T. et al. (1992) Gene organization deduced from the complete sequence of liverwort Marchantia polymorpha mitochondrial DNA. A primitive form of plant mitochondrial genome. J. Mol. Biol., 223, 1-7.
    • (1992) J. Mol. Biol. , vol.223 , pp. 1-7
    • Oda, K.1    Yamato, K.2    Ohta, E.3    Nakamura, Y.4    Takemura, M.5    Nozato, N.6    Ajashi, K.7    Kanegae, T.8    Ogura, Y.9    Kohchi, T.10
  • 17
    • 0030002977 scopus 로고    scopus 로고
    • Genes encoding the same three subunits of respiratory complex II are present in the mitochondrial DNA of two phylogenetically distant eukaryotes
    • Burger,G., Lang,B.F., Reith,M. and Gray,M.W. (1996) Genes encoding the same three subunits of respiratory complex II are present in the mitochondrial DNA of two phylogenetically distant eukaryotes. Proc. Natl Acad. Sci. USA, 93, 2328-2332.
    • (1996) Proc. Natl. Acad. Sci. USA , vol.93 , pp. 2328-2332
    • Burger, G.1    Lang, B.F.2    Reith, M.3    Gray, M.W.4
  • 18
    • 0030041512 scopus 로고    scopus 로고
    • Genes for two subunits of succinate dehydrogenase form a cluster on the mitochondrial genome of Rhodophyta
    • Viehmann,S., Richard,O., Boyen,C. and Zetsche K. (1996) Genes for two subunits of succinate dehydrogenase form a cluster on the mitochondrial genome of Rhodophyta. Curr. Genet., 29, 199-201.
    • (1996) Curr. Genet. , vol.29 , pp. 199-201
    • Viehmann, S.1    Richard, O.2    Boyen, C.3    Zetsche, K.4
  • 19
    • 0023048326 scopus 로고
    • Novel recombinations in the maize mitochondrial genome produce a unique transcriptional unit in the Texas male-sterile cytoplasm
    • Dewey,R.E., Levings,C.S.,3rd and Timothy,D.H. (1986) Novel recombinations in the maize mitochondrial genome produce a unique transcriptional unit in the Texas male-sterile cytoplasm. Cell, 44, 439-449.
    • (1986) Cell , vol.44 , pp. 439-449
    • Dewey, R.E.1    Levings III, C.S.2    Timothy, D.H.3
  • 20
    • 0023465238 scopus 로고
    • Characterization of the gene urf13-T and an unidentified reading frame, ORF 25, in maize and tobacco mitochondria
    • Stamper,S.E., Dewey,R.E., Bland,M.M. and Levings,C.S.,3rd (1987) Characterization of the gene urf13-T and an unidentified reading frame, ORF 25, in maize and tobacco mitochondria. Curr. Genet., 12, 457-463.
    • (1987) Curr. Genet. , vol.12 , pp. 457-463
    • Stamper, S.E.1    Dewey, R.E.2    Bland, M.M.3    Levings III, C.S.4
  • 21
    • 0027675480 scopus 로고
    • The plant mitochondrial open reading frame orf221 encodes a membrane-bound protein
    • Prioli,L.M., Huang,J. and Levings,C.S.,3rd (1993) The plant mitochondrial open reading frame orf221 encodes a membrane-bound protein. Plant Mol. Biol., 23, 287-295.
    • (1993) Plant Mol. Biol. , vol.23 , pp. 287-295
    • Prioli, L.M.1    Huang, J.2    Levings C.S. III3
  • 22
    • 84987505820 scopus 로고
    • The jakobid flagellates: Structural features of Jakoba, Reclinomonas and Histiona and implications for the early diversification of eukaryotes
    • O'Kelly,C.J. (1993) The jakobid flagellates: structural features of Jakoba, Reclinomonas and Histiona and implications for the early diversification of eukaryotes. J. Euk. Microbiol., 40, 627-636.
    • (1993) J. Euk. Microbiol. , vol.40 , pp. 627-636
    • O'Kelly, C.J.1
  • 23
    • 0035063264 scopus 로고    scopus 로고
    • Evolutionary relationships among 'jakobid' flagellates as indicated by alpha- and beta-tubulin phylogenies
    • Edgcomb,V.P., Roger,A.J., Simpson,A.G., Kysela,D.T. and Sogin,M.L. (2001) Evolutionary relationships among 'jakobid' flagellates as indicated by alpha- and beta-tubulin phylogenies. Mol. Biol. Evol., 18, 514-22.
    • (2001) Mol. Biol. Evol. , vol.18 , pp. 514-522
    • Edgcomb, V.P.1    Roger, A.J.2    Simpson, A.G.3    Kysela, D.T.4    Sogin, M.L.5
  • 24
    • 0033179902 scopus 로고    scopus 로고
    • Ultrastructure of Trimastix pyriformis (Klebs) Bernard et al.: Similarities of Trimastix species with retortamonad and jakobid flagellates
    • O'Kelly,C.J., Farmer,M.A. and Nerad,T.A. (1999) Ultrastructure of Trimastix pyriformis (Klebs) Bernard et al.: similarities of Trimastix species with retortamonad and jakobid flagellates. Protist, 150, 149-162.
    • (1999) Protist , vol.150 , pp. 149-162
    • O'Kelly, C.J.1    Farmer, M.A.2    Nerad, T.A.3
  • 26
    • 0037225494 scopus 로고    scopus 로고
    • Structure of the bc1 complex from Seculamonas ecuadoriensis, a jakobid flagellate with an ancestral mitochondrial genome
    • Marx,S., Baumgärtner,M., Kannan,S., Braun,H.P., Lang,B.F. and Burger,G. (2003) Structure of the bc1 complex from Seculamonas ecuadoriensis, a jakobid flagellate with an ancestral mitochondrial genome. Mol. Biol. Evol., 20, 145-153.
    • (2003) Mol. Biol. Evol. , vol.20 , pp. 145-153
    • Marx, S.1    Baumgärtner, M.2    Kannan, S.3    Braun, H.P.4    Lang, B.F.5    Burger, G.6
  • 27
    • 0028214450 scopus 로고
    • Analysis of molecular masses and oligomeric states of protein complexes by blue native electrophoresis and isolation of membrane protein complexes by two-dimensional native electrophoresis
    • Schägger,H., Cramer,W.A. and von Jagow,G. (1994) Analysis of molecular masses and oligomeric states of protein complexes by blue native electrophoresis and isolation of membrane protein complexes by two-dimensional native electrophoresis. Anal. Biochem., 217, 220-230.
    • (1994) Anal. Biochem. , vol.217 , pp. 220-230
    • Schägger, H.1    Cramer, W.A.2    von Jagow, G.3
  • 28
    • 85047683107 scopus 로고    scopus 로고
    • Proteomic approach to identify novel mitochondrial proteins in Arabidopsis
    • Kruft,V., Eubel,H., Jansch,L., Werhahn,W. and Braun,H.P. (2001) Proteomic approach to identify novel mitochondrial proteins in Arabidopsis. Plant Physiol., 127, 1694-1710.
    • (2001) Plant Physiol. , vol.127 , pp. 1694-1710
    • Kruft, V.1    Eubel, H.2    Jansch, L.3    Werhahn, W.4    Braun, H.P.5
  • 30
    • 0020475449 scopus 로고
    • A simple method for displaying the hydropathic character of a protein
    • Kyte,J. and Doolittle,R.F. (1982) A simple method for displaying the hydropathic character of a protein. J. Mol. Biol., 157, 105-132.
    • (1982) J. Mol. Biol. , vol.157 , pp. 105-132
    • Kyte, J.1    Doolittle, R.F.2
  • 32
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson,J.D., Higgins,D.G. and Gibson,T.J. (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res., 22, 4673-4680.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 33
    • 0029933671 scopus 로고    scopus 로고
    • Effective protein sequence comparison
    • Pearson,W.R. (1996) Effective protein sequence comparison. Methods Enzymol., 266, 227-258.
    • (1996) Methods Enzymol. , vol.266 , pp. 227-258
    • Pearson, W.R.1
  • 34
    • 0019887799 scopus 로고
    • Identification of common molecular subsequences
    • Smith,T.F. and Waterman,M.S. (1983) Identification of common molecular subsequences. J. Mol. Biol., 147, 195-197.
    • (1983) J. Mol. Biol. , vol.147 , pp. 195-197
    • Smith, T.F.1    Waterman, M.S.2
  • 35
    • 0028330225 scopus 로고
    • Complete sequence of the mitochondrial DNA of the chlorophyte alga Prototheca wickerhamii. Gene content and genome organization
    • Wolff,G., Plante,I., Lang,B.F., Kück,U. and Burger,G. (1994) Complete sequence of the mitochondrial DNA of the chlorophyte alga Prototheca wickerhamii. Gene content and genome organization. J. Mol. Biol., 237, 75-86.
    • (1994) J. Mol. Biol. , vol.237 , pp. 75-86
    • Wolff, G.1    Plante, I.2    Lang, B.F.3    Kück, U.4    Burger, G.5
  • 36
    • 0344427064 scopus 로고    scopus 로고
    • GenBank accession no. NC2553
    • Burger,G. (2000) GenBank accession no. NC2553.
    • (2000)
    • Burger, G.1
  • 38
    • 0032511986 scopus 로고    scopus 로고
    • Rickettsia, typhus and the mitochondrial connection
    • Gray,M.W. (1998) Rickettsia, typhus and the mitochondrial connection. Nature, 396, 109-110.
    • (1998) Nature , vol.396 , pp. 109-110
    • Gray, M.W.1
  • 39
    • 0028941560 scopus 로고
    • The mitochondrial DNA of the amoeboid protozoon, Acanthamoeba castellanii: Complete sequence, gene content and genome organization
    • Burger,G., Plante,I., Lonergan,K.M. and Gray,M.W. (1995) The mitochondrial DNA of the amoeboid protozoon, Acanthamoeba castellanii: complete sequence, gene content and genome organization. J. Mol. Biol., 245, 522-537.
    • (1995) J. Mol. Biol. , vol.245 , pp. 522-537
    • Burger, G.1    Plante, I.2    Lonergan, K.M.3    Gray, M.W.4
  • 41
    • 0031008228 scopus 로고    scopus 로고
    • The ATP synthase - A splendid molecular machine
    • Boyer,P.D. (1997) The ATP synthase - a splendid molecular machine. Annu. Rev. Biochem., 66, 717-749.
    • (1997) Annu. Rev. Biochem. , vol.66 , pp. 717-749
    • Boyer, P.D.1
  • 42
    • 0037155894 scopus 로고    scopus 로고
    • In the absence of the first membrane-spanning segment of subunit 4(b), the yeast ATP synthase is functional but does not dimerize or oligomerize
    • Soubannier,V., Vaillier,J., Paumard,P., Coulary,B., Scheffer,J. and Velours,J. (2002) In the absence of the first membrane-spanning segment of subunit 4(b), the yeast ATP synthase is functional but does not dimerize or oligomerize. J. Biol. Chem., 277, 10739-10745.
    • (2002) J. Biol. Chem. , vol.277 , pp. 10739-10745
    • Soubannier, V.1    Vaillier, J.2    Paumard, P.3    Coulary, B.4    Scheffer, J.5    Velours, J.6
  • 43
    • 0026611883 scopus 로고
    • 1 ATP synthase. Identification of the individual subunits and properties of the purified spinach leaf mitochondrial ATP synthase
    • 1 ATP synthase. Identification of the individual subunits and properties of the purified spinach leaf mitochondrial ATP synthase. Eur. J. Biochem., 205, 409-416.
    • (1992) Eur. J. Biochem. , vol.205 , pp. 409-416
    • Hamasur, B.1    Glaser, E.2
  • 44
    • 0030111226 scopus 로고    scopus 로고
    • New insights into the composition, molecular mass and stoichiometry of the protein complexes of plant mitochondria
    • Jänsch,L., Kruft,V., Schmitz,U.K. and Braun,H.P. (1996) New insights into the composition, molecular mass and stoichiometry of the protein complexes of plant mitochondria. Plant J., 9, 357-368.
    • (1996) Plant J. , vol.9 , pp. 357-368
    • Jänsch, L.1    Kruft, V.2    Schmitz, U.K.3    Braun, H.P.4
  • 45
    • 0034530444 scopus 로고    scopus 로고
    • Partial assembly of the yeast mitochondrial ATP synthase
    • Mueller,D.M. (2000) Partial assembly of the yeast mitochondrial ATP synthase. J. Bioenerg. Biomembr., 32, 391-400.
    • (2000) J. Bioenerg. Biomembr. , vol.32 , pp. 391-400
    • Mueller, D.M.1
  • 46
    • 0034530609 scopus 로고    scopus 로고
    • The Saccharomyces cerevisiae ATP synthase
    • Velours,J. and Arselin,G. (2000) The Saccharomyces cerevisiae ATP synthase. J. Bioenerg. Biomembr., 32, 383-390.
    • (2000) J. Bioenerg. Biomembr. , vol.32 , pp. 383-390
    • Velours, J.1    Arselin, G.2
  • 47
    • 0035910414 scopus 로고    scopus 로고
    • The rotary machine in the cell, ATP synthase
    • Noji,H. and Yoshida,M. (2001) The rotary machine in the cell, ATP synthase. J. Biol. Chem., 276, 1665-1668.
    • (2001) J. Biol. Chem. , vol.276 , pp. 1665-1668
    • Noji, H.1    Yoshida, M.2
  • 49
    • 0034676438 scopus 로고    scopus 로고
    • Repeated recent and diverse transfers of a mitochondrial gene to the nucleus in flowering plants
    • Adams,K.L., Daley,D.O., Qiu,Y.L., Whelan,J. and Palmer,J.D. (2000) Repeated recent and diverse transfers of a mitochondrial gene to the nucleus in flowering plants. Nature, 408, 354-357.
    • (2000) Nature , vol.408 , pp. 354-357
    • Adams, K.L.1    Daley, D.O.2    Qiu, Y.L.3    Whelan, J.4    Palmer, J.D.5
  • 51
    • 0029866234 scopus 로고    scopus 로고
    • Sequences homologous to yeast mitochondrial and bacteriophage T3 and T7 RNA polymerases are widespread throughout the eukaryotic lineage
    • Cermakian,N., Ikeda,T.M., Cedergren,R. and Gray,M.W. (1996) Sequences homologous to yeast mitochondrial and bacteriophage T3 and T7 RNA polymerases are widespread throughout the eukaryotic lineage. Nucleic Acids Res., 24, 648-654.
    • (1996) Nucleic Acids Res. , vol.24 , pp. 648-654
    • Cermakian, N.1    Ikeda, T.M.2    Cedergren, R.3    Gray, M.W.4
  • 52
    • 0034913239 scopus 로고    scopus 로고
    • The origin and early evolution of mitochondria
    • Gray,M.W., Burger,G. and Lang,B.F. (2001) The origin and early evolution of mitochondria. Genome Biol., 2, 1018.1-1018.5.
    • (2001) Genome Biol. , vol.2
    • Gray, M.W.1    Burger, G.2    Lang, B.F.3


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