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Volumn 48, Issue 2, 2003, Pages 335-348

Binding of the Escherichia coli MelR protein to the melAB promoter: Orientation of MelR subunits and investigation of MelR-DNA contacts

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL PROTEIN; CYSTEINE; EDETIC ACID DERIVATIVE; GENE PRODUCT; HELIX LOOP HELIX PROTEIN; MELIBIOSE; PROTEIN MELAB; PROTEIN MELR; PROTEIN SUBUNIT; TRANSCRIPTION FACTOR; UNCLASSIFIED DRUG;

EID: 0038687706     PISSN: 0950382X     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1365-2958.2003.t01-1-03434.x     Document Type: Article
Times cited : (22)

References (33)
  • 1
    • 0034035345 scopus 로고    scopus 로고
    • Transcription activation at the Escherichia coli melAB promoter: The role of MelR and the cyclic AMP receptor protein
    • Belyaeva, T., Wade, J., Webster, C., Howard, V., Thomas, M., Hyde, E., and Busby, S. (2000) Transcription activation at the Escherichia coli melAB promoter: the role of MelR and the cyclic AMP receptor protein. Mol Microbiol 36: 211-222.
    • (2000) Mol Microbiol , vol.36 , pp. 211-222
    • Belyaeva, T.1    Wade, J.2    Webster, C.3    Howard, V.4    Thomas, M.5    Hyde, E.6    Busby, S.7
  • 2
    • 0032860246 scopus 로고    scopus 로고
    • Amino acid-DNA contacts by RhaS: An AraC transcription activator
    • Bhende, P., and Egan, S. (1999) Amino acid-DNA contacts by RhaS: an AraC transcription activator. J Bacteriol 181: 5185-5192.
    • (1999) J Bacteriol , vol.181 , pp. 5185-5192
    • Bhende, P.1    Egan, S.2
  • 3
    • 0033901463 scopus 로고    scopus 로고
    • Genetic evidences that transcription activation by RhaS involves specific amino acid contacts with sigma 70
    • Bhende, P., and Egan, S. (2000) Genetic evidences that transcription activation by RhaS involves specific amino acid contacts with sigma 70. J Bacteriol 182: 4959-4969.
    • (2000) J Bacteriol , vol.182 , pp. 4959-4969
    • Bhende, P.1    Egan, S.2
  • 4
    • 0030786451 scopus 로고    scopus 로고
    • DNA binding and DNA bending by the MelR transcription activator protein
    • Bourgerie, S., Michán, C., Thomas, M., Busby, S., and Hyde, E. (1997) DNA binding and DNA bending by the MelR transcription activator protein. Nucleic Acids Res 25: 1685-1693.
    • (1997) Nucleic Acids Res , vol.25 , pp. 1685-1693
    • Bourgerie, S.1    Michán, C.2    Thomas, M.3    Busby, S.4    Hyde, E.5
  • 6
    • 0017184389 scopus 로고
    • A rapid and sensitive method for the quantitation of microgram quantities of protein using the principle of protein-dye binding
    • Bradford, M. (1976) A rapid and sensitive method for the quantitation of microgram quantities of protein using the principle of protein-dye binding. Anal Biochem 72: 248-254.
    • (1976) Anal Biochem , vol.72 , pp. 248-254
    • Bradford, M.1
  • 7
    • 0034284365 scopus 로고    scopus 로고
    • Protein-protein interactions mapped by artificial proteases: Where σ factors bind to RNA polymerase
    • Datwyler, S., and Meares, C. (2000) Protein-protein interactions mapped by artificial proteases: where σ factors bind to RNA polymerase. Trends Biol Sci 25: 408-414.
    • (2000) Trends Biol Sci , vol.25 , pp. 408-414
    • Datwyler, S.1    Meares, C.2
  • 8
    • 0036786814 scopus 로고    scopus 로고
    • Growing repertoire of AraC/XylS activators
    • Egan, S. (2002) Growing repertoire of AraC/XylS activators. J Bacteriol 184: 5529-5532.
    • (2002) J Bacteriol , vol.184 , pp. 5529-5532
    • Egan, S.1
  • 10
    • 0023785204 scopus 로고
    • Scanning calorimetric study of the thermal unfolding of catabolite activator protein from Escherichia coli: The absence and presence of cyclic mononucleotides
    • Ghosaini, L., Brown, A., and Sturtevant, J. (1988) Scanning calorimetric study of the thermal unfolding of catabolite activator protein from Escherichia coli: the absence and presence of cyclic mononucleotides. Biochemistry 27: 5257-5261.
    • (1988) Biochemistry , vol.27 , pp. 5257-5261
    • Ghosaini, L.1    Brown, A.2    Sturtevant, J.3
  • 11
    • 0031056514 scopus 로고    scopus 로고
    • Synthesis of the protein cutting reagent Iron (S)-1-(p-bromoacetamidobenzyl) ethylendediaminetetraacetate and conjugation to cysteine side chains
    • Greiner, D., Miyake, R., Moran, J., Jones, A., Negishi, T., Ishihama, A., and Meares, C. (1997) Synthesis of the protein cutting reagent Iron (S)-1-(p-bromoacetamidobenzyl) ethylendediaminetetraacetate and conjugation to cysteine side chains. Bioconj Chem 8: 44-48.
    • (1997) Bioconj Chem , vol.8 , pp. 44-48
    • Greiner, D.1    Miyake, R.2    Moran, J.3    Jones, A.4    Negishi, T.5    Ishihama, A.6    Meares, C.7
  • 12
    • 0036385497 scopus 로고    scopus 로고
    • A comprehensive alanine scanning mutagenesis of the Escherichia coli transcriptional activator SoxS: Identifying amino acids important for DNA binding and transcription activation
    • Griffith, K., and Wolf, R. (2002) A comprehensive alanine scanning mutagenesis of the Escherichia coli transcriptional activator SoxS: identifying amino acids important for DNA binding and transcription activation. J Mol Biol 322: 237-257.
    • (2002) J Mol Biol , vol.322 , pp. 237-257
    • Griffith, K.1    Wolf, R.2
  • 13
    • 0037096842 scopus 로고    scopus 로고
    • DNA binding of the transcription activator protein MelR from Escherichia coli and its C-terminal domain
    • Howard, V., Belyaeva, T., Busby, S., and Hyde, E. (2002) DNA binding of the transcription activator protein MelR from Escherichia coli and its C-terminal domain. Nucleic Acids Res 30: 2692-2700.
    • (2002) Nucleic Acids Res , vol.30 , pp. 2692-2700
    • Howard, V.1    Belyaeva, T.2    Busby, S.3    Hyde, E.4
  • 14
    • 0034617021 scopus 로고    scopus 로고
    • Molecular anatomy of RNA polymerase using protein-conjugated metal probes with nuclease and protease activities
    • Ishihama, A. (2000) Molecular anatomy of RNA polymerase using protein-conjugated metal probes with nuclease and protease activities. Chem Commun 2000: 1091-1094.
    • (2000) Chem Commun , vol.2000 , pp. 1091-1094
    • Ishihama, A.1
  • 15
    • 0001699031 scopus 로고
    • A plasmid vector that allows fusion of the E. coli galactokinase gene to the translation startpoint of other genes
    • Kelsall, A., Evans, C., and Busby, S. (1985) A plasmid vector that allows fusion of the E. coli galactokinase gene to the translation startpoint of other genes. FEBS Lett 180: 155-159.
    • (1985) FEBS Lett , vol.180 , pp. 155-159
    • Kelsall, A.1    Evans, C.2    Busby, S.3
  • 16
    • 0001759947 scopus 로고    scopus 로고
    • Crystal structure of the Escherichia coli Rob transcription factor in complex with DNA
    • Kwon, H., Bennik, M., Demple, B., and Ellenberger, T. (2000) Crystal structure of the Escherichia coli Rob transcription factor in complex with DNA. Nature Struct Biol 7: 424-430.
    • (2000) Nature Struct Biol , vol.7 , pp. 424-430
    • Kwon, H.1    Bennik, M.2    Demple, B.3    Ellenberger, T.4
  • 17
    • 0027120805 scopus 로고
    • Broad-host-range plasmids carrying the E. coli lactose and galactose operons
    • Lodge, J., Fear, J., Busby, S., Gunasekaran, P., and Kamini, N. (1992) Broad-host-range plasmids carrying the E. coli lactose and galactose operons. FEMS Lett 95: 271-276.
    • (1992) FEMS Lett , vol.95 , pp. 271-276
    • Lodge, J.1    Fear, J.2    Busby, S.3    Gunasekaran, P.4    Kamini, N.5
  • 18
    • 0035067086 scopus 로고    scopus 로고
    • The AraC transcriptional activators
    • Martin, R., and Rosner, J. (2001) The AraC transcriptional activators. Curr Opin Microbiol 4: 132-137.
    • (2001) Curr Opin Microbiol , vol.4 , pp. 132-137
    • Martin, R.1    Rosner, J.2
  • 19
    • 0032746803 scopus 로고    scopus 로고
    • Structural requirements for marbox function in transcription activation of mar/sox/rob regulon promoters in Escherichia coli: Sequence, orientation and spatial relationship to the core promoter
    • Martin, R., Gillette, W., Rhee, S., and Rosner, J. (1999) Structural requirements for marbox function in transcription activation of mar/sox/rob regulon promoters in Escherichia coli: sequence, orientation and spatial relationship to the core promoter. Mol Microbiol 34: 431-441.
    • (1999) Mol Microbiol , vol.34 , pp. 431-441
    • Martin, R.1    Gillette, W.2    Rhee, S.3    Rosner, J.4
  • 20
    • 0029068277 scopus 로고
    • The Escherichia coli MelR transcription activator: Production of a stable fragment containing the DNA-binding domain
    • Michán, C., Busby, S., and Hyde, E. (1995) The Escherichia coli MelR transcription activator: production of a stable fragment containing the DNA-binding domain. Nucleic Acids Res 23: 1518-1523.
    • (1995) Nucleic Acids Res , vol.23 , pp. 1518-1523
    • Michán, C.1    Busby, S.2    Hyde, E.3
  • 21
    • 0003785155 scopus 로고
    • Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press
    • Miller, J. (1972) Experiments in Molecular Genetics. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press.
    • (1972) Experiments in Molecular Genetics
    • Miller, J.1
  • 22
    • 0031056544 scopus 로고    scopus 로고
    • The two α subunits of Escherichia coli RNA polymerase are asymmetrically arranged and contact different halves of the DNA upstream element
    • Murakami, K., Kimura, M., Owens, J., Meares, C., and Ishihama, A. (1997) The two α subunits of Escherichia coli RNA polymerase are asymmetrically arranged and contact different halves of the DNA upstream element. Proc Natl Acad Sci USA 94: 1709-1714.
    • (1997) Proc Natl Acad Sci USA , vol.94 , pp. 1709-1714
    • Murakami, K.1    Kimura, M.2    Owens, J.3    Meares, C.4    Ishihama, A.5
  • 23
    • 0030582731 scopus 로고    scopus 로고
    • How AraC interacts specifically with its target DNAs
    • Niland, P., Huhne, R., and Muller-Hill, B. (1996) How AraC interacts specifically with its target DNAs. J Mol Biol 264: 667-674.
    • (1996) J Mol Biol , vol.264 , pp. 667-674
    • Niland, P.1    Huhne, R.2    Muller-Hill, B.3
  • 25
    • 0027173243 scopus 로고
    • AraC protein can activate transcription from only one position and when pointed in only one direction
    • Reeder, T., and Schleif, R. (1993) AraC protein can activate transcription from only one position and when pointed in only one direction. J Mol Biol 231: 205-218.
    • (1993) J Mol Biol , vol.231 , pp. 205-218
    • Reeder, T.1    Schleif, R.2
  • 26
    • 0032169864 scopus 로고    scopus 로고
    • A novel DNA-binding motif in MarA: The first structure for an AraC family transcriptional activator
    • Rhee, S., Martin, R., Rosner, J., and Davies, D. (1998) A novel DNA-binding motif in MarA: the first structure for an AraC family transcriptional activator. Proc Natl Acad Sci USA 95: 10413-10418.
    • (1998) Proc Natl Acad Sci USA , vol.95 , pp. 10413-10418
    • Rhee, S.1    Martin, R.2    Rosner, J.3    Davies, D.4
  • 27
    • 0013649248 scopus 로고    scopus 로고
    • Introduction to Protein: DNA interactions, DNase I footprinting, hydroxyl radical footprinting, permanganate footprinting and supplementary protocols
    • Docherty, K. (ed.). Colchester, UK: BIOS Scientific Publishers. Chap. 1
    • Savery, N., Belyaeva, T., and Busby, S. (1996) Introduction to Protein: DNA interactions, DNase I footprinting, hydroxyl radical footprinting, permanganate footprinting and supplementary protocols. In Essential Techniques: Gene Transcription. Docherty, K. (ed.). Colchester, UK: BIOS Scientific Publishers. Chap. 1, pp. 1-5 and 21-33.
    • (1996) Essential Techniques: Gene Transcription , pp. 1-5
    • Savery, N.1    Belyaeva, T.2    Busby, S.3
  • 28
    • 0032526956 scopus 로고    scopus 로고
    • Transcription activation at Class II CRP-dependent promoters: Identification of determinants in the C-terminal domain of the RNA polymerase alpha subunit
    • Savery, N., Lloyd, G., Kainz, M., Gaal, T., Ross, W., Ebright, R., et al. (1998) Transcription activation at Class II CRP-dependent promoters: identification of determinants in the C-terminal domain of the RNA polymerase alpha subunit. EMBO J 17: 3439-3447.
    • (1998) EMBO J , vol.17 , pp. 3439-3447
    • Savery, N.1    Lloyd, G.2    Kainz, M.3    Gaal, T.4    Ross, W.5    Ebright, R.6
  • 29
    • 0026279733 scopus 로고
    • Use of bacteriophage T7 lysozyme to improve an inducible T7 expression system
    • Studier, W. (1991) Use of bacteriophage T7 lysozyme to improve an inducible T7 expression system. J Mol Biol 219: 37-44.
    • (1991) J Mol Biol , vol.219 , pp. 37-44
    • Studier, W.1
  • 30
    • 0037126615 scopus 로고    scopus 로고
    • A simple mechanism for co-dependence on two activators at an Escherichia coli promoter: The role of MelR and the cyclic AMP receptor protein
    • Wade, J., Belyaeva, T., Hyde, E., and Busby, S. (2001) A simple mechanism for co-dependence on two activators at an Escherichia coli promoter: the role of MelR and the cyclic AMP receptor protein. EMBO J 20: 7160-7167.
    • (2001) EMBO J , vol.20 , pp. 7160-7167
    • Wade, J.1    Belyaeva, T.2    Hyde, E.3    Busby, S.4
  • 31
    • 0023513976 scopus 로고
    • Organisation of the regulatory region of the Escherichia coli melibiose operon
    • Webster, C., Kempsell, K., Booth, I., and Busby, S. (1987) Organisation of the regulatory region of the Escherichia coli melibiose operon. Gene 59: 253-263.
    • (1987) Gene , vol.59 , pp. 253-263
    • Webster, C.1    Kempsell, K.2    Booth, I.3    Busby, S.4
  • 32
    • 0024388316 scopus 로고
    • The E. coli melR gene encodes a DNA binding protein with affinity for specific sequences located in the melibiose-operon regulatory region
    • Webster, C., Gardner, L., and Busby, S. (1989) The E. coli melR gene encodes a DNA binding protein with affinity for specific sequences located in the melibiose-operon regulatory region. Gene 83: 207-213.
    • (1989) Gene , vol.83 , pp. 207-213
    • Webster, C.1    Gardner, L.2    Busby, S.3
  • 33
    • 0028351964 scopus 로고
    • Interactions between the E coli MelR transcription activator protein and operator sequences at the melAB promoter
    • Williams, J., Michán, C., Webster, C., and Busby, S. (1994) Interactions between the E coli MelR transcription activator protein and operator sequences at the melAB promoter. Biochem J 300: 757-763.
    • (1994) Biochem J , vol.300 , pp. 757-763
    • Williams, J.1    Michán, C.2    Webster, C.3    Busby, S.4


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