Recognition promoted by Zn2+ between phenanthroline bridging polyaza ligands and nucleotides - Zn2+ acts as 'messenger' between the receptor and substrate

Journal of Molecular Recognition

Volumn 16, Issue 2, 2003, Pages 102-111

  Guo, Yanhe ^a   Ge, Qingchun ^a   Lin, Hai ^a   Lin, Huakuan ^a   Zhu, Shourong ^a   Zhou, Changyue ^a  

^a NANKAI UNIVERSITY   (China)

Author keywords

Nucleotides; Phenanthroline bridged polyamines; Recognition; Regulation; Supramolecular interactions; Zn(II)

Indexed keywords

EID: 0038673423     PISSN: 09523499     EISSN: None     Source Type: Journal    
DOI: 10.1002/jmr.609     Document Type: Article

References (27)

1. Baldes B, Schneider HJ. 1995. Complexes form polyazacyclophanes, fluorescence indicators, and meal cations-An example of allosterism through ring contraction. Angew. Chem. Int. Ed. Engl. 34: 321-323.
2. 3-). Evaluation of isomeric equilibria. Inorg. Chim. Acta 300-302: 487-498.
3. 15N NMR HMBC experiments. Spectrochim. Acta A 56: 2391-2395.
4. Fritsky IO, Ott R, Krämer R. 2000. Allosteric Regulation of artificial phosphoesterase activity by metal Ions. Angew. Chem. Int. Ed. Engl. 39: 3255-3258.
5. Guo Y, Ge Q, Lin H, Lin H, Zhu S. 2002. Thermodynamic studies on supramolecular interactions of metal ions with nucleotides/tripods ligands. Polyhedron 21: 1002-1015.
6. 2+ does not complex with nitrogen atoms of adenosine triphosphate. J. Am. Chem. Soc. 88: 2077-2078.
7. Hosseini MW, Lehn JM, Maggiora LK, Mertes B, Mertes MP. 1987. Supramolecular catalysis in the hydrolysis of ATP facilitated by macrocyclic polyamines: mechanistic studies. J. Am. Chem. Soc. 109: 537-544.
8. Kikuta E, Kimura E. 2001. A newtype of potent inhibitors of HIV-1 TAR RNA-Tat peptide binding by zinc(II)-macrocyclic tetra-amine complexes. J. Am. Chem. Soc. 123: 7911-7912.
9. Lehn JM. 1988. Supramolecular chemistry: scope and perspective and molecules, supramolecules and molecular devices (Nobel Lecture). Angew. Chem. Int. Ed. Engl. 27: 89-112.
10. Liu T-F, Lin H-K, Zhu S-R, Wang H-M, Wang H-G, Leng X-B, Chen Y-T. 2001. Synthesis and crystal structure of nickel(II) complex with N,N-bis(2′-pyridine)methyl-1,10-phenanthroline-2,9-dimethanamine. J. Mol. Struct. 597: 199-202.
11. Madeja KJ. 1962. Uber eine verbesserte methode zur darstellung o- bzw, p-substituierter methyle-1,10-phenanthroline. Prakt. Chem. 17: 97-103.
12. Martin RB. 1985. Nucleoside site for transition metal ion binding. Acc. Chem. Res. 18: 32-38.
13. Mitchell PR, Sigel H. 1978. Enhanced stability of ternary metal ion/adenosine, 5′-triphosphate complexes. Cooperative effects caused by stacking interactions in complexes containing adenosine triphosphate, phenanthroline and magnesium, calcium and zinc ions. J. Am. Chem. Soc. 100: 1564-1570.
14. Núñez Miguel R, López S, JA, Galisteo D, Díez Martin A, Gordaliza Ramos A. 2000. Calculation of optical rotation from molecular structure: comparative study of MM2, MM3 and AM1 methods. J. Mol. Struct. 522: 219-231.
15. Sajadi SAA, Song B, Gregan F, Sigel H. 1999. Acid-base and metal ion-coordinating properties of pyrimidine-nucleoside 5′-diphosphates (CDP, UDP, dTDP) and of several simple diphosphate Monoesters. Establishment of relations between complex stability and diphosphate basicity Inorg. Chem. 38: 439-448.
16. Sigel A, Sigel H (eds). 1996. Probing of Nucleic Acids by Metal Ion Complexes of Small Molecules, Vol. 33, Metal Ions in Biological Systems. Marcel Dekker: New York; 1-678.
17. Sigel H. 1998. Metal ion assisted stacking interactions and the facilitated hydrolysis of nucleoside, 5′-triphosphates. Pure Appl. Chem. 70: 969-981.
18. Sigel H. 1993. Interactions of metal ions with nucleotides and nucleic acids and their constituents. Chem. Soc. Rev. 255-267.
19. Sigel H, Sigel A (eds). 1989. Interactions Among Ions in Biological Systems. Dekker: New York.
20. 2-) in aqueous solution. J. Am. Chem. Soc. 119: 744-755.
21. Siu F, Ma N, Tsang C. 2001 Cation-π interactions in sodiated phenylalanine complexes: Is phenylalanine in the charge-solvated or zwitterionic form? J. Am. Chem. Soc. 121: 3397-3398.
22. Smith M, Martell AE, Chen Y. 1991. Critical evaluation of stability constants for nucleotides complexes with protons and metal ions and the accompanying enthalpy changes. Pure Appl. Chem. 63: 1015-1077.
23. Sun H, Lin H, Zhou Z, Zhao G, Su X, Chen Y. 2001. Synthesis of 1,10-phenanthroline tetradenate diamines and potentiometric determination of the formation constants of their complexes with manganese(II), cobalt(II), copper(II) and Zinc(II). Indian J. Chem. 40A: 763-767.
24. Sweigers GF, Malefetse TJ. 2000. News self-assembled structural motifs in coordination chemistry. Chem. Rev. 3483-3539.
25. Wall M, Linkletter B, Williams D, Lebius AM, Hynes RC, Chin J. 1999. Rapid hydrolysis of 2′,3′-cAMP with a Cu(II) complex: Effect of intramolecular hydrogen bonding on the basicity and reactivity of a metal-bound hydroxide. J. Am. Chem. Soc. 121: 4710-4711.
26. 1H NMR Study of protonation and Mg(II) coordination of AMP, ADP, and ATP at 25, 50, and 70°C. J. Phys. Chem. 100: 9556-9560.
27. Zuberbuhler DA, Kaden TA, 1982. TITFIT, a comprehensive program for numeric treatment of potentiometric data by using analytical derivatives and automatically optimized subroutine with the Newton-Gauss-Marquardt algorithm. Talanta 29: 201-206.