QTL architecture of resistance and tolerance traits in Arabidopsis thaliana in natural environments

Molecular Ecology

Volumn 12, Issue 5, 2003, Pages 1153-1163

  Weinig, Cynthia ^a,b   Stinchcombe, John R ^a   Schmitt, Johanna ^a  

^a BROWN UNIVERSITY   (United States)

^b UNIVERSITY OF MINNESOTA   (United States)

Author keywords

Arabidopsis thaliana; Phenotypic evolution; QTL mapping; Resistance; Tolerance

Indexed keywords

ARABIDOPSIS; ENVIRONMENT; IMMUNITY, NATURAL; PHENOTYPE; QUANTITATIVE TRAIT LOCI; SEASONS; SELECTION (GENETICS); VARIATION (GENETICS);

ARABIDOPSIS; ARABIDOPSIS THALIANA; EMBRYOPHYTA; ORYCTOLAGUS CUNICULUS;

EID: 0038414036     PISSN: 09621083     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1365-294X.2003.01787.x     Document Type: Article

References (54)

1. Abrahamson WG, Weis AE (1997) Evolutionary Ecology Across Three Trophic Levels. Goldenrods, Gallmakers and Natural Enemies. Princeton University Press, Princeton, NJ.
2. Alonso-Blanco C, Peeters AJM, Koornneef M et al. (1998) Development of an AFLP based linkage map of Ler, Col and Cvi Arabidopsis thaliana ecotypes and construction of a Ler/Cvi recombinant inbred line population. Plant Journal, 14, 259-271.
3. Basten CJ, Weir BS, Zeng Z-B (1994) Zmap-a QTL Cartographer. In: Proceedings of the 5th World Congress on Genetics Applied to Livestock Production: Computing Strategies and Software (ed. Fairfull W), pp. 65-66. Organizing Committee, 5th World Congress on Applied Genetics Applied to Livestock Production, Guelph, Ontario.
4. Basten CJ, Weir BS, Zeng Z-B (1999) QTL Cartographer, Version 1.13. Department of Statistics, North Carolina State University, Raleigh, NC.
5. Brummer EC, Graef GL, Orf J, Wilcox JR, Shoemaker RC (1997) Mapping QTL for seed protein and oil content in eight soybean populations. Crop Science, 37, 370-378.
6. Doerge RW, Churchill GA (1996) Permutation tests for multiple loci affecting a quantitative character. Genetics, 142, 285-294.
7. Falconer DS, Mackay TFC (1997). Introduction to Quantitative Genetics Addison, Wesley, Longman. Ltd., Essex.
8. Feeny P (1976) Plant apparency and chemical defense. Recent Advances in Phytochemistry, 10, 1-10.
9. Fineblum WL, Rausher MD (1995) Trade-off between resistance and tolerance to herbivore damage in a morning glory. Nature, 377, 517-520.
10. Fritz RS, Simms EL (1992) Plant Resistance to Herbivores and Pathogens: Ecology, Evolution, and Genetics University of Chicago Press, Chicago.
11. Fry JD, Nuzhdin SV, Pasuykova E, Mackay TFC (1998) QTL mapping of genotype-environment interaction for fitness in Drosophila melanogaster. Genetical Research, 71, 133-141.
12. Gurganus MC, Fry JD, Nuzhdin SV et al. (1998) Genotype-environment interaction at quantitative trait loci affecting sensory bristle number in Drosophila melanogaster. Genetics, 149, 1883-1898.
13. Hawthorne DJ, Via S (2001) Genetic linkage of ecological specialization and reproductive isolation in pea aphids. Nature, 412, 904-907.
14. Jander G, Cui J, Nhan B, Pierce NE, Ausubel FM (2001) The TASTY locus on chromosome 1 of Arabidopsis affects feeding of the insect herbivore Trichoplusia ni. Plant Physiology, 126, 890-898.
15. Juenger T, Bergelson J (2000) The evolution of compensation to herbivory in scarlet gilia, Ipomopsis aggregata: herbivore-imposed natural selection and quantitative genetics of tolerance. Evolution, 54, 79-92.
16. Kliebenstein DJ, Gershenzon J, Mitchell-Olds T (2001) Comparative quantitative trait loci mapping of aliphatic, indolic and benzylic glucosinolate production in Arabidopsis thaliana leaves and seeds. Genetics, 159, 359-370.
17. Kliebenstein D, Pedersen D, Barker B, Mitchell-Olds T (2002a) Comparative analysis of quantitative trait loci controlling glucosinolates, myrosinase and insect resistance in Arabidopsis thaliana. Genetics, 161, 325-332.
18. Kliebenstein DJ, Figuth A, Mitchell-Olds T (2002b) Genetic architecture of plastic methyl jasmonate responses in Arabidopsis thaliana. Genetics, 161, 1685-1696.
19. Lande R (1979) Quantitative genetic analysis of multivariate evolution, applied to brain: body size allometry. Evolution, 33, 402-416.
20. Lennartson T, Tuomi J, Nilsson P (1997) Evidence for an evolutionary history of overcompensation in the grassland biennial Gentianella campestris (Gentianaceae). American Naturalist, 149, 1147-1155.
21. Levene H (1953) Genetic equilibrium when more than one ecological niche is available. American Naturalist, 87, 331-333.
22. Levins R (1963) Theory of fitness in a heterogeneous environment. II. Developmental flexibility and niche selection. American Naturalist, 47, 75-90.
23. Lister C, Dean C (1993) Recombinant inbred lines for mapping RFLP and phenotypic markers in Arabidopsis thaliana. Plant Journal, 4, 745-750.
24. Lloyd DG (1984) Variation strategies of plants in heterogeneous environments. Biological Linnean Society, 21, 357-358.
25. Lynch M, Walsh B (1997) Genetics and the Analysis of Quantitative Traits. Sinauer Associates, Inc., Sunderland.
26. Mackay TFC (2001) Quantitative trait loci in Drosophila. Nature Genetics, 2, 11-20.
27. Mauricio R (2000) Natural selection and the joint evolution of tolerance and resistance as plant defenses. Evolutionary Ecology, 14, 491-507.
28. Mauricio R (2001) Mapping quantitative trait loci in plants: uses and caveats for evolutionary biology. National Review of Genetics, 2, 370-381.
29. Mauricio R, Rausher MD, Burdick DS (1997) Variation in the defense strategies of plants: are resistance and tolerance mutually exclusive? Ecology, 78, 1301-1311.
30. Mitchell-Olds T (1996) Genetic constraints on life-history evolution: quantitative-trait loci influencing growth and flowering in Arabidopsis thaliana. Evolution, 50, 140-145.
31. Mitchell-Olds T (2001) Arabidopsis thaliana and its wild relatives: a model system for ecology and evolution. Trends in Ecology & Evolution, 16, 693-700.
32. Napp-Zinn K (1985) Arabidopsis Thaliana. In: CRC Handook of Flowering (ed. Halevy AH), pp. 492-503. CRC Press, Boca Raton.
33. Nordborg M, Bergelson J (1999) The effect of seed and rosette cold treatment on germination and flowering time in some Arabidopsis thaliana (Brassicaceae) ecotypes. American Journal of Botany, 86, 470.
34. Paige KN, Whitham TG (1987) Overcompensation in response to mammalian herbivory: the advantage to being eaten. American Naturalist, 129, 407-416.
35. Pilson D (2000) The evolution of plant response to herbivory: simultaneously considering resistance and tolerance in Brassica rapa. Evolutionary Ecology, 14, 457-489.
36. Rausher MD (1992) The measurement of selection on quantitative traits: biases due to environmental covariances between traits and fitness. Evolution, 46, 616-626.
37. Sari-Gorla M, Calinski T, Kaczmarek Z, Krajewski P (1997) Detection of QTL-environment interaction in maize by a least squares interval mapping method. Heredity, 78, 146-157.
38. SAS (1999) SAS/STAT User's Guide. SAS Institute, Cary, NC.
39. Silvertown J (1988) The demographic and evolutionary consequences of seed dormancy. In: Plant Population Ecology (eds Davy AJ, Hutchings MJ, Watkinson AR), pp. 205-219. Blackwell Scientific Publications, Oxford.
40. Simms EL, Triplett J (1994) Costs and benefits of plant responses to disease: resistance and tolerance. Evolution, 48, 1973-1985.
41. Soller M, Beckman JS (1990) Marker-based mapping of quantitative trait loci using replicated progenies. Theoretical and Applied Genetics, 80, 205-208.
42. Stinchcombe JR, Rausher MD (2002) Evolution of tolerance to deer herbivory: modifications caused by the presence or absence of insects. Proceedings of the Royal Society of London, Series B, 269, 1241-1246.
43. Stowe KA (1998) Experimental evolution of resistance in Brassica rapa: correlated response to tolerance in lines selected for glucosinolate content. Evolution, 52, 703-712.
44. Tiffin P, Inouye BD (2000) Measuring tolerance to herbivory: accuracy and precision of estimates made using natural vs. imposed damage. Evolution, 54, 1024-1029.
45. Tiffin P, Rausher MD (1999) Genetic constraints and selection acting on tolerance to herbivory in the common morning glory Ipomoea purpurea. American Naturalist, 154, 700-716.
46. Venable DL (1985) The evolutionary ecology of seed heteromorphism. American Naturalist, 126, 577-595.
47. Via S, Lande R (1985) Genotype-environment interaction and the evolution of phenotypic plasticity. Evolution, 39, 505-522.
48. Vieira C, Pasyukova EG, Zeng Z-B et al. (2000) Genotype-environment interaction for quantitative trait loci affecting lifespan in Drosophila melanogaster. Genetics, 154, 213-227.
49. Weinig C, Ungerer MC, Dorn LA et al. (2002) Novel loci control variation in reproductive timing in Arabidopsis thaliana in natural environments. Genetics, 162, 1875-1884.
50. Weinig CJ, Stinchcombe R, Schmitt J (2003a) Evolutionary genetics of resistance and tolerance to rabbit herbivory in Arabidopsis thaliana. Evolution, in press.
51. Weinig C, Dorn LA, Kane NC et al. (2003b) Heterogeneous selection at specific loci in natural environments in Arabidopsis thaliana. Genetics, in press.
52. Westerman JM, Lawrence MJ (1970) Genotype-environment interaction and developmental regulation in Arabidopsis thaliana. I. Inbred lines; description. Heredity, 25, 609-627.
53. Wilson IW, Schiff CL, Hughes DE, Somerville SC (2001) Quantitative trait loci analysis of powdery mildew disease resistance in the Arabidopsis thaliana accession Kashmir-1. Genetics, 158, 1301-1309.
54. Zeng Z-B (1994) Precision mapping of quantitative trait loci. Genetics, 136, 1457-1468.