A putative DNA helicase and novel oligoribonuclease in the Diachasmimorpha longicaudata entomopoxvirus (DlEPV)

Archives of Virology

Volumn 148, Issue 7, 2003, Pages 1431-1444

  Mwaengo, D M ^a   Lawrence, Pauline O ^a  

^a UNIVERSITY OF FLORIDA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ARBOVIRUS; ASCOVIRUS; DIACHASMIMORPHA LONGICAUDATA; DIACHASMIMORPHA LONGICAUDATA ENTOMOPOXVIRUS; DIADROMUS; DIADROMUS PULCHELLUS; DNA VIRUSES; ENTOMOPOXVIRINAE; INVERTEBRATA; POXVIRIDAE; UNIDENTIFIED ENTOMOPOXVIRUS; VESPIDAE; VESPOIDEA;

EID: 0038267666     PISSN: 03048608     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00705-002-0975-3     Document Type: Article

References (33)

1. Afonso CL, Tulman ER, Lu Z, Oma E, Kutish GF, Rock DL (1999) The genome of Melanoplus sanguinipes entomopoxvirus. J Virol 73: 533-552
2. Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25: 3389-3402 Review
3. Bigot Y, Rabouille A, Sizaret P-Y, Hamelin M-H, Periquet G (1997) Particle and genomic characteristics of a new member of the ascoviridae: Diadromus pulchellus ascovirus. J Gen Virol 78: 1139-1147
4. Bawden AL, Glassberg KJ, Diggans J, Shaw R, Farmerie W, Moyer RW (2000) Complete genomic sequence of the Amsacta moorei entomopoxvirus: analysis and comparison with other poxviruses. Virology 274: 120-139
5. Dall D, Sriskantha A, Vera A, Lai-Fook A, Symonds T (1993) A gene encoding a highly expressed spindle body protein of Heliothis armigera entomopoxvirus. J Gen Virol 74: 1811-1818
6. Deutscher MP, Li Z (2000) Exoribonucleases and their multiple roles in RNA metabolism. Prog Nucleic Acid Res Mol Biol 66: 67-105
7. Fernandez A, Guo HS, Saenz P, Simon-Buela L, Gomez de Cedron M, Garcia JA (1997) The motif V of plum pox potyvirus CI RNA helicase is involved in NTP hydrolysis and is essential for virus RNA replication. Nucleic Acids Res 25: 4474-4480
8. Freemont PS (1993) The RING finger. A novel protein sequence motif related to the zinc finger. Ann N Y Acad Sci 684: 174-192 Review
9. Goodwin RH, Milner RJ, Beaton CD (1991) Entomopoxvirinae. In: Adams JR, Bonami JR (eds) Atlas of invertebrate viruses. CRC Press, Boca Raton, pp. 259-285
10. Gorbalenya AE, Koonin EV, Donchenko AP, Blinov VM (1989) Two related superfamilies of putative helicases involved in replication, recombination, repair and expression of DNA and RNA genomes. Nucleic Acids Res 17: 4713-4730
11. Gross CH, Shuman S (1998) The nucleoside triphosphatase and helicase activities of vaccinia virus NPH-II are essential for virus replication. J Virol 72: 4729-4736
12. Hall RL, Moyer RW (1991) Identification, cloning, and sequencing of a fragment of Amsacta moorei entomopoxvirus DNA containing the spheroidin gene and three vaccinia virus-related open reading frames. J Virol 65: 6516-6527
13. Hofmann K, Bucher P, Falquet L, Bairoch A (1999) The PROSITE database, its status in 1999. Nucleic Acids Res 27: 215-219
14. Horton P, Nakai K (1997) Better prediction of protein cellular localization sites with the k nearest neighbor classifier. Intellig Syst Mol Biol 5: 147-152
15. Jankowsky E, Gross CH, Shuman S, Pyle AM (2000) The DExH protein NPH-II is a processive and directional motor for unwinding RNA. Nature 403: 447-451
16. Kartasova T, van de Putte P (1988) Isolation, characterization, and UV-stimulated expression of two families of genes encoding polypeptides of related structure in human epidermal keratinocytes. Mol Cell Biol 8: 2195-2203
17. Lackner CA, Condit RC (2000) Vaccinia virus gene A18R DNA helicase is a transcript release factor. J Biol Chem 275: 1485-1494
18. Lawrence PO (2002) Purification and partial characterization of an entomopoxvirus (DIEPV) from a parasitic wasp of tephritid fruit flies. J Insect Sci 2: 10 insectscience.org/2.10
19. Lawrence PO, Akin DB (1990) Virus-like particles from the poison glands of the parasitic wasp Biosteres longicaudatus (Hymenoptera: Braconidae). Can J Zoo 68: 539-546
20. Le TH, Blair D, McManus DP (2001) A leucine zipper protein of mitochondrial origin. Biochim Biophys Acta 1546: 435-443
21. Mitchell PJ, Tjian R (1989) Transcriptional regulation in mammalian cells by sequence specific DNA binding proteins. Science 245: 371-378 Review
22. Moss B (2001) Poxviridae: the viruses and their replication. In: Knipe DM, Howley DM (eds) Fields virology, 4th edn. Lippincott Williams and Wilkins, Philadelphia. pp. 1249-1283
23. Moss B, Ahn BY, Amegadzie B, Gershon PD, Keck JG (1991) Cytoplasmic transcription system encoded by vaccinia virus. J Biol Chem 266: 1355-1358
24. Mustafa AL, Yuen L (1991) Identification and sequencing of the Choristoneura biennis entomopoxvirus DNA polymerase gene. DNA Seq 2: 39-45
25. Nguyen LH, Erzberger JP, Root J, Wilson DM 3rd (2000) The human homolog of Escherichia coli Orn degrades small single-stranded RNA and DNA oligomers. J Biol Chem 275: 25900-25906
26. Sambrook J, Fritsch EF, Maniatis T (1989) Molecular cloning: a laboratory manual, 2nd edn. Cold Spring Harbor Laboratory Press, New York
27. Simpson DA, Condit RC (1994) The vaccinia virus A18R protein plays a role in viral transcription during both the early and the late phases of infection. J Virol 68: 3642-3649
28. Stasiak K, Demattei M, Federici B, Bigot Y (2000) Phylogenetic position of the Diadromus pulchellus ascovirus DNA polymerase among viruses with large double stranded DNA genomes. J Gen Virol 81: 3059-3072
29. Suzuki M (1989) SPXX, a frequent sequence motif in gene regulatory proteins. J Mol Biol 5: 61-84
30. Thompson JD, Higgins GD, Gibson TJ (1994) CLUSTALW: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22: 4673-4680
31. Yu D, Deutscher MP (1995) Oligoribonuclease is distinct from the other known exoribonucleases of Escherichia coli. J Bacteriol 177: 4137-4139
32. Zhang X, Zhu L, Deutscher MP (1998) Oligoribonuclease is encoded by a highly conserved gene in the 3′-5′ exonuclease superfamily. J Bacteriol 180: 2779-2781
33. Zuo Y, Deutscher MP (2001) Exoribonuclease superfamilies: structural analysis and phylogenetic distribution. Nucleic Acids Res 29: 1017-1026