A thylakoidal processing peptidase from the heterokont alga Heterosigma akashiwo

Plant Molecular Biology

Volumn 52, Issue 2, 2003, Pages 463-472

  Chaal, Balbir K ^a   Ishida, Ken Ichiro ^b   Green, Beverley R ^a  

^a UNIVERSITY OF BRITISH COLUMBIA   (Canada)

^b KANAZAWA UNIVERSITY   (Japan)

Author keywords

Heterosigma akashiwo; PsbO; Thylakoid targeting domain; Thylakoidal processing peptidase

Indexed keywords

ALGAE; CELL MEMBRANES; ENZYME INHIBITION; MOLECULAR BIOLOGY;

CHLOROPLASTS;

PLANT CELL CULTURE;

ALGAE; ALGAL PROTEINS; AMINO ACID SEQUENCE; CHLOROPLASTS; ELECTROPHORESIS, POLYACRYLAMIDE GEL; ENDOPEPTIDASES; ENZYME INHIBITORS; MICROSCOPY, ELECTRON; MOLECULAR SEQUENCE DATA; PEAS; PROTEIN PRECURSORS; PROTEIN SORTING SIGNALS; SEQUENCE HOMOLOGY, AMINO ACID;

AKASHIWO; ALGAE; BACILLARIOPHYTA; EUKARYOTA; HETEROSIGMA; HETEROSIGMA AKASHIWO; PISUM SATIVUM; RAPHIDOPHYCEAE;

EID: 0038236214     PISSN: 01674412     EISSN: None     Source Type: Journal    
DOI: 10.1023/A:1023900100803     Document Type: Article

References (35)

1. Apt, K.E., Zaslavkaia, L., Lippmeier, J.C., Lang, M., Kilian, O., Wetherbee, R., Grossman, A.R. and Kroth, P.G. 2002. In vivo characterization of diatom multipartite plastid targeting signals. J. Cell. Sci. 115: 4061-4069.
2. Barbrook, A.C., Packer, J.C.L. and Howe, C.J. 1996. Inhibition by penem of processing peptidases from cyanobacteria and chloroplast thylakoids. FEBS Lett. 398: 198-200.
3. Black, M.T. and Bruton, G. 1998. Inhibitors of bacterial signal peptidases. Curr. Pharmaceut. Design 4: 133-154.
4. Cavalier-Smith, T. 2000. Membrane heredity and early chloroplast evolution. Trends Plant Sci. 5: 174-182.
5. Chaal, B.K, Mould, R.M., Barbrook, A.C., Gray, J.C. and Howe, C.J. 1998. Characterization of a cDNA encoding the thylakoidal processing peptidase from Arabidopsis thaliana. J. Biol. Chem. 273: 689-692.
6. Chen, X., Valkenburgh, C.V., Fang, H. and Green, N. 1999. Signal peptides having standard and nonstandard cleavage sites can be processed by Imp1p of the mitochondrial inner membrane protease. J. Biol. Chem. 274: 37750-37754.
7. Douglas, S.E. and Penny, S.L. 1999. The plastid genome of the cryptophyte alga, Guillardia theta. J. Mol. Evol. 48: 236-244.
8. Duffaud, G. and Inouye, M. 1988. Signal peptidases recognize a structural feature at the cleavage site of secretory proteins. J. Biol. Chem. 263: 10224-10228.
9. Frohman, M.A. 1990. RACE: rapid amplification of cDNA ends. In: M.A. Innis, D.H. Gelfand, J.J. Sninsky and T.J. White (Eds.) PCR Protocols, Academic Press, San Diego, CA, pp. 28-38.
10. Gibbs, S.P. 1979. The route of entry of cytoplasmically synthesized proteins into chloroplasts of algae possessing chloroplast ER. J. Cell Sci. 35: 253-266.
11. Ishida, K., Cavalier-Smith, T. and Green, B.R. 2000. Endomembrane structure and the chloroplast protein-targeting pathway in Heterosigma akashiwo (Raphidophyceae, Chromista). J. Phycol. 36: 1135-1144.
12. Ishida, K. and Green, B.R. 2002. Second- and third-hand chloroplasts in dinoflagellates: phylogeny of oxygen-evolving enhancer 1 (PsbO) protein reveals replacement of a nuclear-encoded plastid gene by that of a haptophyte tertiary endosymbiont. Proc. Natl. Acad. Sci. USA 99: 9294-9299.
13. 2 in higher plants, algae and natural phytoplankton. Biochem. Physiol. Pflanzen 167: 191-194.
14. Kirwin, P.M., Elderfield, P.D. and Robinson, C. 1987. Partial purification of a thylakoidal processing peptidase involved in plastocyanin biogenesis. J. Biol. Chem. 262: 16386-16390.
15. Kirwin, P.M., Elderfield, P.D., Williams, R.S. and Robinson, C. 1988. Organization, orientation and lateral distribution of the plastocyanin processing peptidase in the thylakoid network. J. Biol. Chem. 263: 18128-18132.
16. Lang, M. and Kroth, P.G. 2001. Diatom fucoxanthin chlorophyll a/c binding protein (FCP) and land plant light-harvesting proteins use a similar pathway for thylakoid membrane insertion. J. Biol. Chem. 276: 7985-7991.
17. Lang, M., Apt, K.E. and Kroth, P.G. 1998. Protein transport into 'complex' diatom plastids utilizes two different targeting signals. J. Biol. Chem. 273: 30973-30978.
18. McIntosh, L. and Cattolico, R.A. 1978. Preservation of algal and higher plant ribosomal RNA integrity during extraction and electrophoretic quantitation. Anal. Biochem. 91: 600-612.
19. Moreira, D., Le Guyader, H. and Philippe, H. 2000. The origin of red algae and the evolution of chloroplasts. Nature 405: 69-72.
20. Mori, H. and Cline, K. 2001. Post-translational protein translocation into thylakoids by the Sec and ΔpH-dependent pathways. Biochim. Biophys. Acta 1541: 80-90.
21. Mould, R.M. and Gray, J. C. 1998. Preparation of chloroplasts for protein synthesis and protein import. In: J.E. Celis (Ed.) Cell Biology: A Laboratory Handbook, Academic Press, New York, pp. 81-86.
22. Nielsen, H., Engelbrecht, J., Brunak, S. and von Heijne, G. 1997. Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites. Protein Eng. 10: 1-6.
23. Nikaido, I., Asamizu, E., Nakajima, M., Nakamura, Y., Saga, N. and Tabata, S. 2000. Generation of 10,154 expressed sequence tags from a leafy gametophyte of a marine red alga, Porphyra yezoensis. DNA Res. 7: 223-227.
24. Paetzel, M., Dalbey, R.E. and Strynadka, N.C. J. 2000. The structure and mechanism of bacterial type I signal peptidases. A novel antibiotic target. Pharmacol. Ther. 87: 27-49.
25. Paetzel, M., Dalbey, R.E. and Strynadka, N.C. J. 2002. Crystal structure of a bacterial signal peptidase apoenzyme. J. Biol. Chem. 277: 9512-9519.
26. Peltier, J.-B., Friso, G., Kalume, D.E., Roepstorff, P., Nilsson, F., Adamska, I. and van Wijk, K.J. 2000. Proteomics of the chloroplast: systematic identification and targeting analysis of lumenal and peripheral thylakoid proteins. Plant Cell 12: 319-341.
27. Perry, C.R., Ashby, M.J. and Elsmere, S.A. 1995. Penems as research tools to investigate the activity of E. coli leader peptidase. Biochem. Soc. Trans. 23: 548S.
28. Richter, S. and Lamppa, G.K. 1998. A chloroplast processing enzyme functions as the general stromal processing peptidase. Proc. Natl. Acad. Sci. USA 95: 7463-7468.
29. Sambrook, J., Fritsch, E.F. and Maniatis, T. 1989. Molecular Cloning: A Laboratory Manual, 2nd ed. Cold Spring Harbor Laboratory Press, Plainview, NY.
30. Scaramuzzi, C.D., Hiller, R.G. and Stokes, H.W. 1992. Identification of a chloroplast-encoded secA gene homologue in a chromophytic alga: possible role in chloroplast protein translocation. Curr. Genet. 22: 421-427.
31. Schubert, M., Petersson, U.A., Haas, B.J., Funk, C., Schroder, W.P. and Kieselbach, T. 2002. Proteome map of the chloroplast lumen of Arabidopsis thaliana. J. Biol. Chem. 277: 8354-8365.
32. Shackleton, J.B. and Robinson, C. 1991. The thylakoidal processing peptidase is a signal-type peptidase with stringent substrate requirements at the -3 and -1 positions. J. Biol. Chem. 266: 12152-12156.
33. Tschantz, W.R. and Dalbey, R.E. 1994. Bacterial leader peptidase I. Meth. Enzymol. 244: 285-301.
34. Valentin, K. 1997. Phylogeny and expression of the secA gene from a chromophytic alga: implications for the evolution of plastids and sec-dependent protein translocation. Curr. Genet. 32: 300-307.
35. Wastl, J. and Maier, U.-G. 2000. Transport of proteins into cryptomonads complex plastids. J. Biol. Chem. 275: 23194-23198.