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Volumn 12, Issue 7, 2003, Pages 1979-1991

AFLP utility for population assignment studies: Analytical investigation and empirical comparison with microsatellites

Author keywords

AFLP; Assignment test; Coregonus clupeaformis; Likelihood; Microsatellites; Population assignment

Indexed keywords

DATA INTERPRETATION, STATISTICAL; GENETICS, POPULATION; MICROSATELLITE REPEATS; MODELS, GENETIC; POLYMORPHISM, RESTRICTION FRAGMENT LENGTH; SPECIES SPECIFICITY;

EID: 0037969155     PISSN: 09621083     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1365-294X.2003.01856.x     Document Type: Article
Times cited : (152)

References (41)
  • 2
    • 0036006355 scopus 로고    scopus 로고
    • Amplified fragment length polymorphism analysis identifies hybrids between two subspecies of warblers
    • Bensch S, Helbig AJ, Salomon M, Seibold I (2002) Amplified fragment length polymorphism analysis identifies hybrids between two subspecies of warblers. Molecular Ecology, 11, 473-481.
    • (2002) Molecular Ecology , vol.11 , pp. 473-481
    • Bensch, S.1    Helbig, A.J.2    Salomon, M.3    Seibold, I.4
  • 3
    • 0034068865 scopus 로고    scopus 로고
    • Individual-based genotype analysis in studies of parentage and population assignment: How many loci, how many alleles?
    • Bernatchez L, Duchesne P (2000) Individual-based genotype analysis in studies of parentage and population assignment: how many loci, how many alleles? Canadian Journal of Fisheries and Aquatic Sciences, 57, 1-12.
    • (2000) Canadian Journal of Fisheries and Aquatic Sciences , vol.57 , pp. 1-12
    • Bernatchez, L.1    Duchesne, P.2
  • 4
    • 0034789153 scopus 로고    scopus 로고
    • Identification of interspecific hybrids by amplified fragment length polymorphism: The case of sturgeon
    • Congiu L, Dupanloup L, Patarnello T et al. (2001) Identification of interspecific hybrids by amplified fragment length polymorphism: the case of sturgeon. Molecular Ecology, 10, 2355-2359.
    • (2001) Molecular Ecology , vol.10 , pp. 2355-2359
    • Congiu, L.1    Dupanloup, L.2    Patarnello, T.3
  • 6
    • 0032711229 scopus 로고    scopus 로고
    • New methods employing multilocus genotypes to select or exclude populations as origins of individuals
    • Cornuet JM, Piry S, Luikart G, Estoup A, Solignac M (1999) New methods employing multilocus genotypes to select or exclude populations as origins of individuals. Genetics, 153, 1989-2000.
    • (1999) Genetics , vol.153 , pp. 1989-2000
    • Cornuet, J.M.1    Piry, S.2    Luikart, G.3    Estoup, A.4    Solignac, M.5
  • 7
    • 0036006386 scopus 로고    scopus 로고
    • Genetic evidence for male biased dispersal in the red-billed quelea Quelea quelea
    • Dallimer M, Blackburn C, Jones PJ, Pemberton JM (2002) Genetic evidence for male biased dispersal in the red-billed quelea Quelea quelea. Molecular Ecology, 11, 529-533.
    • (2002) Molecular Ecology , vol.11 , pp. 529-533
    • Dallimer, M.1    Blackburn, C.2    Jones, P.J.3    Pemberton, J.M.4
  • 8
    • 0033053232 scopus 로고    scopus 로고
    • Determining the source of individuals: Multilocus genotyping in nonequilibrium population genetics
    • Davies N, Villablanca FX, Roderick GK (1999) Determining the source of individuals: multilocus genotyping in nonequilibrium population genetics. Trends in Eoclogy and Evolution, 14, 17-21.
    • (1999) Trends in Eoclogy and Evolution , vol.14 , pp. 17-21
    • Davies, N.1    Villablanca, F.X.2    Roderick, G.K.3
  • 9
    • 0036733231 scopus 로고    scopus 로고
    • AFLPOP: A computer program for simulated and real population allocation based on AFLP data
    • Duchesne P, Bernatchez L (2002) AFLPOP: a computer program for simulated and real population allocation based on AFLP data. Molecular Ecology Notes, 2, 380-383.
    • (2002) Molecular Ecology Notes , vol.2 , pp. 380-383
    • Duchesne, P.1    Bernatchez, L.2
  • 10
    • 85047681504 scopus 로고    scopus 로고
    • Source population of dispersing rock-wallabies (Petrogale lateralis) identified by assignment tests on multilocus genotypic data
    • Eldridge MDB, Kinnear JE, Onus ML (2001) Source population of dispersing rock-wallabies (Petrogale lateralis) identified by assignment tests on multilocus genotypic data. Molecular Ecology, 10, 2867-2876.
    • (2001) Molecular Ecology , vol.10 , pp. 2867-2876
    • Eldridge, M.D.B.1    Kinnear, J.E.2    Onus, M.L.3
  • 11
    • 0030606354 scopus 로고    scopus 로고
    • The genetical history of an isolated population of the endangered grey wolf Canis lupus: A study of nuclear and mitochondrial polymorphisms
    • Ellegren H, Savolainen P, Rosen B (1996) The genetical history of an isolated population of the endangered grey wolf Canis lupus: a study of nuclear and mitochondrial polymorphisms. Philosophical Transactions of the Royal Society of London B, 351, 1661-1669.
    • (1996) Philosophical Transactions of the Royal Society of London B , vol.351 , pp. 1661-1669
    • Ellegren, H.1    Savolainen, P.2    Rosen, B.3
  • 12
    • 0002577818 scopus 로고    scopus 로고
    • Microsatellites and minisatellites for molecular ecology: Theoretical and experimental considerations
    • ed. Carvhalo GR. IOS Press, The Netherlands
    • Estoup A, Anger B (1998) Microsatellites and minisatellites for molecular ecology: theoretical and experimental considerations. In: Advances in Molecular Ecology (ed. Carvhalo GR), pp. 55-86. IOS Press, The Netherlands.
    • (1998) Advances in Molecular Ecology , pp. 55-86
    • Estoup, A.1    Anger, B.2
  • 13
    • 0029034186 scopus 로고
    • Microsatellite variation in honey bee (Apis melifera L.) populations: Hierarchical genetic structure and test of the infinite allele and stepwise mutation models
    • Estoup A, Garnery L, Solignac M, Cornuet JM (1995) Microsatellite variation in honey bee (Apis melifera L.) populations: hierarchical genetic structure and test of the infinite allele and stepwise mutation models. Genetics, 140, 679-695.
    • (1995) Genetics , vol.140 , pp. 679-695
    • Estoup, A.1    Garnery, L.2    Solignac, M.3    Cornuet, J.M.4
  • 14
    • 0030744883 scopus 로고    scopus 로고
    • Female-biased dispersal in the monogamous mammal Crocidura russula: Evidence from field data and microsatellite patterns
    • Favre L, Balloux F, Goudet J, Perrin N (1997) Female-biased dispersal in the monogamous mammal Crocidura russula: evidence from field data and microsatellite patterns. Proceedings of the Royal Society of London Series B, 264, 127-132.
    • (1997) Proceedings of the Royal Society of London Series B , vol.264 , pp. 127-132
    • Favre, L.1    Balloux, F.2    Goudet, J.3    Perrin, N.4
  • 15
    • 0030983892 scopus 로고    scopus 로고
    • Launching microsatellites: A review of mutation processes and methods of phylogenetic inference
    • Goldstein DB, Pollock DD (1997) Launching microsatellites: a review of mutation processes and methods of phylogenetic inference. Journal of Heredity, 88, 335-342.
    • (1997) Journal of Heredity , vol.88 , pp. 335-342
    • Goldstein, D.B.1    Pollock, D.D.2
  • 16
    • 0030905297 scopus 로고    scopus 로고
    • Population identification of western hemisphere shorebirds throughout the annual cycle
    • Haig SM (1997) Population identification of western hemisphere shorebirds throughout the annual cycle. Molecular Ecology, 6, 412-427.
    • (1997) Molecular Ecology , vol.6 , pp. 412-427
    • Haig, S.M.1
  • 17
    • 0036017091 scopus 로고    scopus 로고
    • Estimating the long-term effects of stocking domesticated trout into wild brown trout (Salmo trutta) populations: An approach using microsatellite DNA analysis of historical and contemporary samples
    • Hansen MM (2002) Estimating the long-term effects of stocking domesticated trout into wild brown trout (Salmo trutta) populations: an approach using microsatellite DNA analysis of historical and contemporary samples. Molecular Ecology, 11, 1003-1016.
    • (2002) Molecular Ecology , vol.11 , pp. 1003-1016
    • Hansen, M.M.1
  • 18
    • 0034863614 scopus 로고    scopus 로고
    • Assigning individual fish to populations using microsatellite DNA markers
    • Hansen MM, Kenchington E, Nielsen EE (2001) Assigning individual fish to populations using microsatellite DNA markers. Fish and Fisheries, 2, 93-112.
    • (2001) Fish and Fisheries , vol.2 , pp. 93-112
    • Hansen, M.M.1    Kenchington, E.2    Nielsen, E.E.3
  • 19
    • 0032695681 scopus 로고    scopus 로고
    • Correlated trophic specialization and genetic divergence in sympatric lake whitefish ecotypes (Coregonus clupeaformis): Support for the ecological speciation hypothesis
    • Lu G, Bernatchez L (1999) Correlated trophic specialization and genetic divergence in sympatric lake whitefish ecotypes (Coregonus clupeaformis): support for the ecological speciation hypothesis. Evolution, 53, 1491-1505.
    • (1999) Evolution , vol.53 , pp. 1491-1505
    • Lu, G.1    Bernatchez, L.2
  • 20
    • 0030776801 scopus 로고    scopus 로고
    • Multilocus genotypes, a tree of individuals, and human evolutionary history
    • Mountain JL, Cavalli-Sforza LL (1997) Multilocus genotypes, a tree of individuals, and human evolutionary history. American Journal of Human Genetics, 61, 705-718.
    • (1997) American Journal of Human Genetics , vol.61 , pp. 705-718
    • Mountain, J.L.1    Cavalli-Sforza, L.L.2
  • 22
    • 0034767567 scopus 로고    scopus 로고
    • Microsatellite evolution in vertebrates: Inference from AC dinucleotide repeats
    • Neff BD, Gross MR (2001) Microsatellite evolution in vertebrates: inference from AC dinucleotide repeats. Evolution, 55, 1717-1733.
    • (2001) Evolution , vol.55 , pp. 1717-1733
    • Neff, B.D.1    Gross, M.R.2
  • 23
    • 0030970638 scopus 로고    scopus 로고
    • Analysis of microsatellites DNA from old scale samples of Atlantic salmon salmo salar: A comparison of genetic composition over 60 years
    • Nielsen EE, Hansen MM, Loeschcke V (1997) Analysis of microsatellites DNA from old scale samples of Atlantic salmon salmo salar: a comparison of genetic composition over 60 years. Molecular Ecology, 6, 487-492.
    • (1997) Molecular Ecology , vol.6 , pp. 487-492
    • Nielsen, E.E.1    Hansen, M.M.2    Loeschcke, V.3
  • 24
    • 0036006364 scopus 로고    scopus 로고
    • The usefulness of amplified fragment length polymorphism markers for taxon discrimination across graduated fine evolutionary levels in Caribbean Anolis lizards
    • Orgen R, Thorpe RS (2002) The usefulness of amplified fragment length polymorphism markers for taxon discrimination across graduated fine evolutionary levels in Caribbean Anolis lizards. Molecular Ecology, 11, 437-445.
    • (2002) Molecular Ecology , vol.11 , pp. 437-445
    • Orgen, R.1    Thorpe, R.S.2
  • 25
    • 0029310503 scopus 로고
    • Microsatellite analysis of population stucture in Canadian polar bears
    • Paetkau D, Calvert W, Stirling I, Strobeck C (1995) Microsatellite analysis of population stucture in Canadian polar bears. Molecular Ecology, 4, 347-354.
    • (1995) Molecular Ecology , vol.4 , pp. 347-354
    • Paetkau, D.1    Calvert, W.2    Stirling, I.3    Strobeck, C.4
  • 26
    • 0032188801 scopus 로고    scopus 로고
    • Gene flow between insular, coastal and interior populations of brown bears in Alaska
    • Paetkau D, Shields GF, Strobeck C (1998) Gene flow between insular, coastal and interior populations of brown bears in Alaska. Molecular Ecology, 7, 1283-1292.
    • (1998) Molecular Ecology , vol.7 , pp. 1283-1292
    • Paetkau, D.1    Shields, G.F.2    Strobeck, C.3
  • 27
    • 0030774621 scopus 로고    scopus 로고
    • Genetic tagging of humpback whales
    • Palsboll PJ, Allen J, Berube M et al. (1997) Genetic tagging of humpback whales. Nature, 388, 767-769.
    • (1997) Nature , vol.388 , pp. 767-769
    • Palsboll, P.J.1    Allen, J.2    Berube, M.3
  • 28
    • 0034757683 scopus 로고    scopus 로고
    • Lacustrine spatial distribution of landlocked Atlantic salmon populations assessed across generations by multilocus individual assignment and mixed-stock analyses
    • Potvin C, Bernatchez L (2001) Lacustrine spatial distribution of landlocked Atlantic salmon populations assessed across generations by multilocus individual assignment and mixed-stock analyses. Molecular Ecology, 10, 2375-2388.
    • (2001) Molecular Ecology , vol.10 , pp. 2375-2388
    • Potvin, C.1    Bernatchez, L.2
  • 29
    • 0034702757 scopus 로고    scopus 로고
    • The one that did not get away: Individual assignment using microsatellite data detects a case of fishing competition fraud
    • Primmer CR, Koskinen MT, Piironen J (2000) The one that did not get away: individual assignment using microsatellite data detects a case of fishing competition fraud. Proceedings of the Royal Society of Biological Sciences, Series B, 267, 1699-1704.
    • (2000) Proceedings of the Royal Society of Biological Sciences, Series B , vol.267 , pp. 1699-1704
    • Primmer, C.R.1    Koskinen, M.T.2    Piironen, J.3
  • 31
    • 0001391295 scopus 로고    scopus 로고
    • Genetic mapping as a tool for studying speciation
    • eds Soltis PS, Doyle JJ. Chapman & Hall, New York
    • Rieseberg LH (1998) Genetic mapping as a tool for studying speciation. In: Molecular Systematics of Plants (eds Soltis PS, Doyle JJ), pp. 459-487. Chapman & Hall, New York.
    • (1998) Molecular Systematics of Plants , pp. 459-487
    • Rieseberg, L.H.1
  • 32
    • 0035544458 scopus 로고    scopus 로고
    • Combining the analyses of introgressive hybridisation and linkage mapping to investigate the genetic architecture of population divergence in the lake whitefish (Coregonus clupeaformis, Mitchill)
    • Rogers SM, Campbell D, Baird SJE, Danzmann RG, Bernatchez L (2001) Combining the analyses of introgressive hybridisation and linkage mapping to investigate the genetic architecture of population divergence in the lake whitefish (Coregonus clupeaformis, Mitchill). Genetica, 111, 25-41.
    • (2001) Genetica , vol.111 , pp. 25-41
    • Rogers, S.M.1    Campbell, D.2    Baird, S.J.E.3    Danzmann, R.G.4    Bernatchez, L.5
  • 33
    • 0033213117 scopus 로고    scopus 로고
    • Potential of microsatellites for individual assignment: The North atlantic redfish (genus Sebastes) species complex as a case study
    • Roques S, Duchesne P, Bernatchez L (1999) Potential of microsatellites for individual assignment: the North atlantic redfish (genus Sebastes) species complex as a case study. Molecular Ecology, 8, 1703-1717.
    • (1999) Molecular Ecology , vol.8 , pp. 1703-1717
    • Roques, S.1    Duchesne, P.2    Bernatchez, L.3
  • 34
    • 0034809182 scopus 로고    scopus 로고
    • Distribution of individual inbreeding coefficients, relatedness and influence of stocking on native anadromous brown trout (Salmo trutta) population structure
    • Ruzzante DE, Hansen MM, Meldrup D (2001) Distribution of individual inbreeding coefficients, relatedness and influence of stocking on native anadromous brown trout (Salmo trutta) population structure. Molecular Ecology, 10, 2107-2128.
    • (2001) Molecular Ecology , vol.10 , pp. 2107-2128
    • Ruzzante, D.E.1    Hansen, M.M.2    Meldrup, D.3
  • 36
    • 0031978467 scopus 로고    scopus 로고
    • Analytical aspects of population-specific DNA fingerprint for individuals
    • Smouse PE, Chevillon C (1998) Analytical aspects of population-specific DNA fingerprint for individuals. Journal of Heredity, 89, 143-150.
    • (1998) Journal of Heredity , vol.89 , pp. 143-150
    • Smouse, P.E.1    Chevillon, C.2
  • 37
    • 0020380021 scopus 로고
    • Multiple-locus assignment of individuals to groups as a function of the genetic variation within and differences among human populations
    • Smouse PE, Spielman RS, Park MH (1982) Multiple-locus assignment of individuals to groups as a function of the genetic variation within and differences among human populations. American Naturalist, 119, 445-463.
    • (1982) American Naturalist , vol.119 , pp. 445-463
    • Smouse, P.E.1    Spielman, R.S.2    Park, M.H.3
  • 38
    • 0028834605 scopus 로고
    • AFLP: A new technique for DNA fingerprinting
    • Vos P, Hogers R, Bleeker M et al. (1995) AFLP: a new technique for DNA fingerprinting. Nucleic Acids Research, 23, 4407-4414.
    • (1995) Nucleic Acids Research , vol.23 , pp. 4407-4414
    • Vos, P.1    Hogers, R.2    Bleeker, M.3
  • 40
    • 0034886335 scopus 로고    scopus 로고
    • Differential gene exchange between parapatric morphs of Littorina saxatilis detected using AFLP markers
    • Wilding CS, Butlin RK, Grahame J (2001) Differential gene exchange between parapatric morphs of Littorina saxatilis detected using AFLP markers. Journal of Evolutionary Biology, 14, 611-619.
    • (2001) Journal of Evolutionary Biology , vol.14 , pp. 611-619
    • Wilding, C.S.1    Butlin, R.K.2    Grahame, J.3
  • 41
    • 0035047177 scopus 로고    scopus 로고
    • Genetic characterization of hybridization and introgression between anadromous rainbow trout (Oncorhynchus mykiss irideus) and coastal cutthroat trout (O-clarki clarki)
    • Young WP, Ostberg CO, Keim P, Thorgaard GH (2001) Genetic characterization of hybridization and introgression between anadromous rainbow trout (Oncorhynchus mykiss irideus) and coastal cutthroat trout (O-clarki clarki). Molecular Ecology, 10, 921-930.
    • (2001) Molecular Ecology , vol.10 , pp. 921-930
    • Young, W.P.1    Ostberg, C.O.2    Keim, P.3    Thorgaard, G.H.4


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