메뉴 건너뛰기




Volumn 22, Issue 13, 2003, Pages 3431-3440

Complex mechanism of site-specific DNA replication termination in fission yeast

Author keywords

DNA replication barrier; Mating type switching; Replication termination; Rtf2; Schizosaccharomyces pombe

Indexed keywords

CIS ACTING ELEMENT; DNA BASE; PROTEIN RTF1P; PROTEIN RTF2P; PURINE; RIBOSOME DNA; SITE SPECIFIC REPLICATION TERMINATOR PROTEIN RTS1; TRANS ACTING FACTOR; TRANSCRIPTION FACTOR; UNCLASSIFIED DRUG;

EID: 0037925515     PISSN: 02614189     EISSN: None     Source Type: Journal    
DOI: 10.1093/emboj/cdg330     Document Type: Article
Times cited : (36)

References (49)
  • 1
    • 0032479993 scopus 로고    scopus 로고
    • A site- and strand-specific DNA break confers asymmetric switching potential in fission yeast
    • Arcangioli, B. (1998) A site- and strand-specific DNA break confers asymmetric switching potential in fission yeast. EMBO J., 17, 4503-4510.
    • (1998) EMBO J. , vol.17 , pp. 4503-4510
    • Arcangioli, B.1
  • 2
    • 0034654537 scopus 로고    scopus 로고
    • Fission yeast switches mating type by a replication-recombination coupled process
    • Arcangioli, B. and de Lahondes, R. (2000) Fission yeast switches mating type by a replication-recombination coupled process. EMBO J., 19, 1389-1396.
    • (2000) EMBO J. , vol.19 , pp. 1389-1396
    • Arcangioli, B.1    De Lahondes, R.2
  • 3
    • 0023646792 scopus 로고
    • The localization of replication origins on ARS plasmids in S.cerevisiae
    • Brewer, B.J. and Fangman, W.L. (1987) The localization of replication origins on ARS plasmids in S.cerevisiae. Cell, 51, 463-471.
    • (1987) Cell , vol.51 , pp. 463-471
    • Brewer, B.J.1    Fangman, W.L.2
  • 4
    • 0024291357 scopus 로고
    • A replication fork barrier at the 3′ end of yeast ribosomal RNA genes
    • Brewer, B.J. and Fangman, W.L. (1988) A replication fork barrier at the 3′ end of yeast ribosomal RNA genes. Cell, 55, 637-643.
    • (1988) Cell , vol.55 , pp. 637-643
    • Brewer, B.J.1    Fangman, W.L.2
  • 5
    • 0033032373 scopus 로고    scopus 로고
    • Termination of DNA replication of bacterial and plasmid chromosomes
    • Bussiere, D.E. and Bastia, D. (1999) Termination of DNA replication of bacterial and plasmid chromosomes. Mol. Microbiol., 31, 1611-1618.
    • (1999) Mol. Microbiol. , vol.31 , pp. 1611-1618
    • Bussiere, D.E.1    Bastia, D.2
  • 6
    • 0033536196 scopus 로고    scopus 로고
    • Orientation of DNA replication establishes mating-type switching pattern in S.pombe
    • Dalgaard, J.Z. and Klar, A.J. (1999) Orientation of DNA replication establishes mating-type switching pattern in S.pombe. Nature, 400, 181-184.
    • (1999) Nature , vol.400 , pp. 181-184
    • Dalgaard, J.Z.1    Klar, A.J.2
  • 7
    • 0034664767 scopus 로고    scopus 로고
    • swi1 and swi3 perform imprinting, pausing and termination of DNA replication in S.pombe
    • Dalgaard, J.Z. and Klar, A.J. (2000) swi1 and swi3 perform imprinting, pausing and termination of DNA replication in S.pombe. Cell, 102, 745-751.
    • (2000) Cell , vol.102 , pp. 745-751
    • Dalgaard, J.Z.1    Klar, A.J.2
  • 8
    • 0035882059 scopus 로고    scopus 로고
    • A DNA replication-arrest site RTS1 regulates imprinting by determining the direction of replication at mat1 in S.pombe
    • Dalgaard, J.Z. and Klar, A.J. (2001) A DNA replication-arrest site RTS1 regulates imprinting by determining the direction of replication at mat1 in S.pombe. Genes Dev., 15, 2060-2068.
    • (2001) Genes Dev. , vol.15 , pp. 2060-2068
    • Dalgaard, J.Z.1    Klar, A.J.2
  • 9
    • 0029740114 scopus 로고    scopus 로고
    • DNA replication fork pause sites dependent on transcription
    • Deshpande, A.M. and Newlon, C.S. (1996) DNA replication fork pause sites dependent on transcription. Science, 272, 1030-1033.
    • (1996) Science , vol.272 , pp. 1030-1033
    • Deshpande, A.M.1    Newlon, C.S.2
  • 10
    • 34250108837 scopus 로고
    • Cell lineage asymmetry for Schizosaccharomyces pombe: Unilateral transmission of a high-frequency state of mating-type switching of a homothallic fission yeast
    • Egel, R. and Eie, B. (1987) Cell lineage asymmetry for Schizosaccharomyces pombe: Unilateral transmission of a high-frequency state of mating-type switching of a homothallic fission yeast. Curr. Genet., 12, 429-433.
    • (1987) Curr. Genet. , vol.12 , pp. 429-433
    • Egel, R.1    Eie, B.2
  • 11
    • 0029031546 scopus 로고
    • Molecular coevolution of mammalian ribosomal gene terminator sequences and the transcription termination factor TTF-I
    • Evers, R. and Grummt, I. (1995) Molecular coevolution of mammalian ribosomal gene terminator sequences and the transcription termination factor TTF-I. Proc. Natl Acad. Sci. USA, 92, 5827-5831.
    • (1995) Proc. Natl. Acad. Sci. USA , vol.92 , pp. 5827-5831
    • Evers, R.1    Grummt, I.2
  • 12
    • 0034789621 scopus 로고    scopus 로고
    • A DNA replication origin and a replication fork barrier used in vivo in the circular plasmid pKD1
    • Fabiani, L., Irene, C., Aragona, M. and Newlon, C.S. (2001) A DNA replication origin and a replication fork barrier used in vivo in the circular plasmid pKD1. Mol. Genet. Genomics, 266, 326-335.
    • (2001) Mol. Genet. Genomics , vol.266 , pp. 326-335
    • Fabiani, L.1    Irene, C.2    Aragona, M.3    Newlon, C.S.4
  • 13
    • 0343488591 scopus 로고    scopus 로고
    • Termination of mammalian rDNA replication: Polar arrest of replication fork movement by transcription termination factor TTF-I
    • Gerber, J.K., Gogel, E., Berger, C., Wallisch, M., Muller, F., Grummt, I. and Grummt, F. (1997) Termination of mammalian rDNA replication: polar arrest of replication fork movement by transcription termination factor TTF-I. Cell, 90, 559-567.
    • (1997) Cell , vol.90 , pp. 559-567
    • Gerber, J.K.1    Gogel, E.2    Berger, C.3    Wallisch, M.4    Muller, F.5    Grummt, I.6    Grummt, F.7
  • 14
    • 0026761603 scopus 로고
    • Replication forks pause at yeast centromeres
    • Greenfeder, S.A. and Newlon, C.S. (1992) Replication forks pause at yeast centromeres. Mol. Cell Biol., 12, 4056-4066.
    • (1992) Mol. Cell. Biol. , vol.12 , pp. 4056-4066
    • Greenfeder, S.A.1    Newlon, C.S.2
  • 15
    • 0027417019 scopus 로고
    • Conserved features in the mode of replication of eukaryotic ribosomal RNA genes
    • Hernandez, P., Martin-Parras, L., Martinez-Robles, M.L. and Schvartzman, J.B. (1993) Conserved features in the mode of replication of eukaryotic ribosomal RNA genes. EMBO J., 12, 1475-1485.
    • (1993) EMBO J. , vol.12 , pp. 1475-1485
    • Hernandez, P.1    Martin-Parras, L.2    Martinez-Robles, M.L.3    Schvartzman, J.B.4
  • 16
    • 0033974047 scopus 로고    scopus 로고
    • Mechanisms and consequences of replication fork arrest
    • Hyrien, O. (2000) Mechanisms and consequences of replication fork arrest. Biochimie, 82, 5-17.
    • (2000) Biochimie , vol.82 , pp. 5-17
    • Hyrien, O.1
  • 17
    • 0024004923 scopus 로고
    • Four mating-type genes control sexual differentiation in the fission yeast
    • Kelly, M., Burke, J., Smith, M., Klar, A. and Beach, D. (1988) Four mating-type genes control sexual differentiation in the fission yeast. EMBO J., 7, 1537-1547.
    • (1988) EMBO J. , vol.7 , pp. 1537-1547
    • Kelly, M.1    Burke, J.2    Smith, M.3    Klar, A.4    Beach, D.5
  • 18
    • 0024453491 scopus 로고
    • The replication terminator protein of E. coli is a DNA sequence-specific contra-helicase
    • Khatri, G.S., MacAllister, T., Sista, P.R. and Bastia, D. (1989) The replication terminator protein of E. coli is a DNA sequence-specific contra-helicase. Cell, 59, 667-674.
    • (1989) Cell , vol.59 , pp. 667-674
    • Khatri, G.S.1    MacAllister, T.2    Sista, P.R.3    Bastia, D.4
  • 19
    • 0023091626 scopus 로고
    • Differentiated parental DNA strands confer developmental asymmetry on daughter cells in fission yeast
    • Klar, A.J. (1987) Differentiated parental DNA strands confer developmental asymmetry on daughter cells in fission yeast. Nature, 326, 466-470.
    • (1987) Nature , vol.326 , pp. 466-470
    • Klar, A.J.1
  • 20
    • 0030133624 scopus 로고    scopus 로고
    • A yeast gene product, Fob1 protein, required for both replication fork blocking and recombinational hotspot activities
    • Kobayashi, T. and Horiuchi, T. (1996) A yeast gene product, Fob1 protein, required for both replication fork blocking and recombinational hotspot activities. Genes Cells, 1, 465-474.
    • (1996) Genes Cells , vol.1 , pp. 465-474
    • Kobayashi, T.1    Horiuchi, T.2
  • 21
    • 0032535478 scopus 로고    scopus 로고
    • Expansion and contraction of ribosomal DNA repeats in Saccharomyces cerevisiae: Requirement of replication fork blocking (Fob1) protein and the role of RNA polymerase I
    • Kobayashi, T., Heck, D.J., Nomura, M. and Horiuchi, T. (1998) Expansion and contraction of ribosomal DNA repeats in Saccharomyces cerevisiae: requirement of replication fork blocking (Fob1) protein and the role of RNA polymerase I. Genes Dev., 12, 3821-3830.
    • (1998) Genes Dev. , vol.12 , pp. 3821-3830
    • Kobayashi, T.1    Heck, D.J.2    Nomura, M.3    Horiuchi, T.4
  • 22
    • 0030911141 scopus 로고    scopus 로고
    • Inactivation of the replication-termination system affects the replication mode and causes unstable maintenance of plasmid R1
    • Krabbe, M., Zabielski, J., Bernander, R. and Nordstrom, K. (1997) Inactivation of the replication-termination system affects the replication mode and causes unstable maintenance of plasmid R1. Mol. Microbiol., 24, 723-735.
    • (1997) Mol. Microbiol. , vol.24 , pp. 723-735
    • Krabbe, M.1    Zabielski, J.2    Bernander, R.3    Nordstrom, K.4
  • 23
    • 0017660726 scopus 로고
    • Terminus region of the chromosome in Escherichia coli inhibits replication forks
    • Kuempel, P.L., Duerr, S.A. and Seeley, N.R. (1977) Terminus region of the chromosome in Escherichia coli inhibits replication forks. Proc. Natl Acad. Sci. USA, 74, 3927-3931.
    • (1977) Proc. Natl. Acad. Sci. USA , vol.74 , pp. 3927-3931
    • Kuempel, P.L.1    Duerr, S.A.2    Seeley, N.R.3
  • 24
  • 25
    • 0023806623 scopus 로고
    • Organization of replication of ribosomal DNA in Saccharomyces cerevisiae
    • Linskens, M.H. and Huberman, J.A. (1988) Organization of replication of ribosomal DNA in Saccharomyces cerevisiae. Mol. Cell Biol., 8, 4927-4935.
    • (1988) Mol. Cell. Biol. , vol.8 , pp. 4927-4935
    • Linskens, M.H.1    Huberman, J.A.2
  • 26
    • 0027486027 scopus 로고
    • Initiation and termination of DNA replication in human rRNA genes
    • Little, R.D., Platt, T.H. and Schildkraut, C.L. (1993) Initiation and termination of DNA replication in human rRNA genes. Mol. Cell Biol., 13, 6600-6613.
    • (1993) Mol. Cell. Biol. , vol.13 , pp. 6600-6613
    • Little, R.D.1    Platt, T.H.2    Schildkraut, C.L.3
  • 27
    • 0032571379 scopus 로고    scopus 로고
    • Co-localization of polar replication fork barriers and rRNA transcription terminators in mouse rDNA
    • Lopez-Estrano, C., Schvartzman, J.B., Krimer, D.B. and Hernandez P. (1998) Co-localization of polar replication fork barriers and rRNA transcription terminators in mouse rDNA. J. Mol. Biol., 277, 249-256.
    • (1998) J. Mol. Biol. , vol.277 , pp. 249-256
    • Lopez-Estrano, C.1    Schvartzman, J.B.2    Krimer, D.B.3    Hernandez, P.4
  • 28
    • 0025298571 scopus 로고
    • nmt1 of fission yeast. A highly transcribed gene completely repressed by thiamine
    • Maundrell, K. (1990) nmt1 of fission yeast. A highly transcribed gene completely repressed by thiamine. J. Biol. Chem., 265, 10857-10864.
    • (1990) J. Biol. Chem. , vol.265 , pp. 10857-10864
    • Maundrell, K.1
  • 29
    • 0027390036 scopus 로고
    • Thiamine-repressible expression vectors pREP and pRIP for fission yeast
    • Maundrell, K. (1993) Thiamine-repressible expression vectors pREP and pRIP for fission yeast. Gene, 123, 127-130.
    • (1993) Gene , vol.123 , pp. 127-130
    • Maundrell, K.1
  • 30
    • 0028309565 scopus 로고
    • Intragenic processing in yeast rRNA is dependent on the 3′ external transcribed spacer
    • Melekhovets, Y.F., Good, L., Elela, S.A. and Nazar, R.N. (1994) Intragenic processing in yeast rRNA is dependent on the 3′ external transcribed spacer. J. Mol. Biol., 239, 170-180.
    • (1994) J. Mol. Biol. , vol.239 , pp. 170-180
    • Melekhovets, Y.F.1    Good, L.2    Elela, S.A.3    Nazar, R.N.4
  • 31
    • 0031574207 scopus 로고    scopus 로고
    • In vivo analyses of RNA polymerase I termination in Schizosaccharomyces pombe
    • Melekhovets, Y.F., Shwed, P.S. and Nazar, R.N. (1997) In vivo analyses of RNA polymerase I termination in Schizosaccharomyces pombe. Nucleic Acids Res., 25, 5103-5109.
    • (1997) Nucleic Acids Res. , vol.25 , pp. 5103-5109
    • Melekhovets, Y.F.1    Shwed, P.S.2    Nazar, R.N.3
  • 32
    • 0035918246 scopus 로고    scopus 로고
    • Structural and functional analysis of a bipolar replication terminus. Implications for the origin of polarity of fork arrest
    • Mohanty, B.K., Bussiere, D.E., Sahoo, T., Pai, K.S., Meijer, W.J., Bron, S. and Bastia, D. (2001) Structural and functional analysis of a bipolar replication terminus. Implications for the origin of polarity of fork arrest. J. Biol. Chem., 276, 13160-13168.
    • (2001) J. Biol. Chem. , vol.276 , pp. 13160-13168
    • Mohanty, B.K.1    Bussiere, D.E.2    Sahoo, T.3    Pai, K.S.4    Meijer, W.J.5    Bron, S.6    Bastia, D.7
  • 33
    • 0026025891 scopus 로고
    • Molecular genetic analysis of fission yeast Schizosaccharomyces pombe
    • Moreno, S., Klar, A. and Nurse, P. (1991) Molecular genetic analysis of fission yeast Schizosaccharomyces pombe. Methods Enzymol., 194, 795-823.
    • (1991) Methods Enzymol. , vol.194 , pp. 795-823
    • Moreno, S.1    Klar, A.2    Nurse, P.3
  • 34
    • 0036965964 scopus 로고    scopus 로고
    • DNA knotting caused by head-on collision of transcription and replication
    • Olavarrieta, L., Hernandez, P., Krimer, D.B. and Schvartzman, J.B. (2002) DNA knotting caused by head-on collision of transcription and replication. J. Mol. Biol., 322, 1-6.
    • (2002) J. Mol. Biol. , vol.322 , pp. 1-6
    • Olavarrieta, L.1    Hernandez, P.2    Krimer, D.B.3    Schvartzman, J.B.4
  • 35
    • 0036197316 scopus 로고    scopus 로고
    • Transcription termination factor TTF-I exhibits contrahelicase activity during DNA replication
    • Putter, V. and Grummt, F. (2002) Transcription termination factor TTF-I exhibits contrahelicase activity during DNA replication. EMBO Rep., 3, 147-152.
    • (2002) EMBO Rep. , vol.3 , pp. 147-152
    • Putter, V.1    Grummt, F.2
  • 36
    • 0028783905 scopus 로고
    • The contrahelicase activities of the replication terminator proteins of Escherichia coli and Bacillus subtilis are helicase-specific and impede both helicase translocation and authentic DNA unwinding
    • Sahoo, T., Mohanty, B.K., Lobert, M., Manna, A.C. and Bastia, D. (1995) The contrahelicase activities of the replication terminator proteins of Escherichia coli and Bacillus subtilis are helicase-specific and impede both helicase translocation and authentic DNA unwinding. J. Biol. Chem., 270, 29138-29144.
    • (1995) J. Biol. Chem. , vol.270 , pp. 29138-29144
    • Sahoo, T.1    Mohanty, B.K.2    Lobert, M.3    Manna, A.C.4    Bastia, D.5
  • 37
    • 0031843516 scopus 로고    scopus 로고
    • Ribosomal DNA replication in the fission yeast Schizosaccharomyces pombe
    • Sanchez, J.A., Kim, S.M. and Huberman, J.A. (1998) Ribosomal DNA replication in the fission yeast, Schizosaccharomyces pombe. Exp. Cell Res., 238, 220-230.
    • (1998) Exp. Cell Res. , vol.238 , pp. 220-230
    • Sanchez, J.A.1    Kim, S.M.2    Huberman, J.A.3
  • 39
    • 0025362399 scopus 로고
    • A rapid and simple method for preparation of RNA from Saccharomyces cerevisiae
    • Schmitt, M.E., Brown, T.A. and Trumpower, B.L. (1990) A rapid and simple method for preparation of RNA from Saccharomyces cerevisiae. Nucleic Acids Res., 18, 3091-3092.
    • (1990) Nucleic Acids Res. , vol.18 , pp. 3091-3092
    • Schmitt, M.E.1    Brown, T.A.2    Trumpower, B.L.3
  • 40
    • 0036809071 scopus 로고    scopus 로고
    • Increased recombination intermediates and homologous integration hot spots at DNA replication origins
    • Segurado, M., Gomez, M. and Anteguera, F. (2002) Increased recombination intermediates and homologous integration hot spots at DNA replication origins. Mol. Cell, 10, 907-916.
    • (2002) Mol. Cell , vol.10 , pp. 907-916
    • Segurado, M.1    Gomez, M.2    Anteguera, F.3
  • 41
    • 0027280274 scopus 로고
    • DNA replication of histone gene repeats in Drosophila melanogaster tissue culture cells: Multiple initiation sites and replication pause sites
    • Shinomiya, T. and Ina, S. (1993) DNA replication of histone gene repeats in Drosophila melanogaster tissue culture cells: multiple initiation sites and replication pause sites. Mol. Cell. Biol., 13, 4098-4106.
    • (1993) Mol. Cell. Biol. , vol.13 , pp. 4098-4106
    • Shinomiya, T.1    Ina, S.2
  • 42
    • 0033935187 scopus 로고    scopus 로고
    • The contributions of replication orientation, gene direction and signal sequences to base-composition asymmetries in bacterial genomes
    • Tillier, E.R. and Collins, R.A. (2000) The contributions of replication orientation, gene direction and signal sequences to base-composition asymmetries in bacterial genomes. J. Mol. Evol., 50, 249-257.
    • (2000) J. Mol. Evol. , vol.50 , pp. 249-257
    • Tillier, E.R.1    Collins, R.A.2
  • 43
    • 0035985059 scopus 로고    scopus 로고
    • Ku antigen supports termination of mammalian rDNA replication by transcription termination factor TTF-I
    • Wallisch, M., Kunkel, E., Hoehn, K. and Grummt, F. (2002) Ku antigen supports termination of mammalian rDNA replication by transcription termination factor TTF-I. Biol. Chem., 383, 765-771.
    • (2002) Biol. Chem. , vol.383 , pp. 765-771
    • Wallisch, M.1    Kunkel, E.2    Hoehn, K.3    Grummt, F.4
  • 44
    • 0034085624 scopus 로고    scopus 로고
    • Ribosomal DNA replication fork barrier and HOT1 recombination hot spot: Shared sequences but independent activities
    • Ward, T.R., Hoang, M.L., Prusty, R., Lau, C.K., Keil, R.L., Fangman, W.L. and Brewer, B.J. (2000) Ribosomal DNA replication fork barrier and HOT1 recombination hot spot: shared sequences but independent activities. Mol. Cell. Biol., 20, 4948-4957.
    • (2000) Mol. Cell. Biol. , vol.20 , pp. 4948-4957
    • Ward, T.R.1    Hoang, M.L.2    Prusty, R.3    Lau, C.K.4    Keil, R.L.5    Fangman, W.L.6    Brewer, B.J.7
  • 45
    • 0021764625 scopus 로고
    • Impediment to replication fork movement in the terminus region of the Bacillus subtilis chromosome
    • Weiss, A.S. and Wake, R.G. (1984) Impediment to replication fork movement in the terminus region of the Bacillus subtilis chromosome. J. Mol. Biol., 179, 745-750.
    • (1984) J. Mol. Biol. , vol.179 , pp. 745-750
    • Weiss, A.S.1    Wake, R.G.2
  • 47
    • 0030863327 scopus 로고    scopus 로고
    • Developmental regulation of DNA replication: Replication fork barriers and programmed gene amplification in Tetrahymena thermophila
    • Zhang, Z., Macalpine, D.M. and Kapler, G.M. (1997) Developmental regulation of DNA replication: replication fork barriers and programmed gene amplification in Tetrahymena thermophila. Mol. Cell Biol., 17, 6147-6156.
    • (1997) Mol. Cell. Biol. , vol.17 , pp. 6147-6156
    • Zhang, Z.1    Macalpine, D.M.2    Kapler, G.M.3
  • 48
    • 0030820636 scopus 로고    scopus 로고
    • Molecular cloning and analysis of Schizosaccharomyces pombe Reb1p: Sequence-specific recognition of two sites in the far upstream rDNA intergenic spacer
    • Zhao, A., Guo, A., Liu, Z. and Pape, L. (1997) Molecular cloning and analysis of Schizosaccharomyces pombe Reb1p: sequence-specific recognition of two sites in the far upstream rDNA intergenic spacer. Nucleic Acids Res., 25, 904-910.
    • (1997) Nucleic Acids Res. , vol.25 , pp. 904-910
    • Zhao, A.1    Guo, A.2    Liu, Z.3    Pape, L.4
  • 49
    • 0026645944 scopus 로고
    • Localization of a DNA replication origin and termination zone on chromosome III of Saccharomyces cerevisiae
    • Zhu, J., Newlon, C.S. and Huberman, J.A. (1992) Localization of a DNA replication origin and termination zone on chromosome III of Saccharomyces cerevisiae. Mol. Cell Biol., 12, 4733-4741.
    • (1992) Mol. Cell. Biol. , vol.12 , pp. 4733-4741
    • Zhu, J.1    Newlon, C.S.2    Huberman, J.A.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.