-
1
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul, S. F., Madden, T. L., Schaffer, A. A., Zhang, J., Zhang, Z., Miller, W. & Lipman, D. J. (1997). Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25, 3389-3402.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
2
-
-
0025099312
-
Fluorescent-oligonucleotide probing of whole cells for determinative, phylogenetic, and environmental studies in microbiology
-
Amann, R. I., Krumholz, L. & Stahl, D. A. (1990). Fluorescent-oligonucleotide probing of whole cells for determinative, phylogenetic, and environmental studies in microbiology. J Bacteriol 172, 762-770.
-
(1990)
J. Bacteriol.
, vol.172
, pp. 762-770
-
-
Amann, R.I.1
Krumholz, L.2
Stahl, D.A.3
-
3
-
-
0028946084
-
Phylogenetic identification and in situ detection of individual microbial cells without cultivation
-
Amann, R. I., Ludwig, W. & Schleifer, K.-H. (1995). Phylogenetic identification and in situ detection of individual microbial cells without cultivation. Microbiol Rev 59, 143-169.
-
(1995)
Microbiol. Rev.
, vol.59
, pp. 143-169
-
-
Amann, R.I.1
Ludwig, W.2
Schleifer, K.-H.3
-
4
-
-
0035370087
-
The identification of microorganisms by fluorescence in situ hybridisation
-
Amann, R., Fuchs, B. M. & Behrens, S. (2001). The identification of microorganisms by fluorescence in situ hybridisation. Curr Opin Biotechnol 12, 231-236.
-
(2001)
Curr. Opin. Biotechnol.
, vol.12
, pp. 231-236
-
-
Amann, R.1
Fuchs, B.M.2
Behrens, S.3
-
5
-
-
0036667419
-
Filamentous Chloroflexi (green non-sulfur bacteria) are abundant in wastewater treatment processes with biological nutrient removal
-
Björnsson, L., Hugenholtz, P., Tyson, G. W. & Blackall, L. L. (2002). Filamentous Chloroflexi (green non-sulfur bacteria) are abundant in wastewater treatment processes with biological nutrient removal. Microbiology 148, 2309-2318.
-
(2002)
Microbiology
, vol.148
, pp. 2309-2318
-
-
Björnsson, L.1
Hugenholtz, P.2
Tyson, G.W.3
Blackall, L.L.4
-
6
-
-
0029025721
-
Bacterial community structures of phosphate-removing and non-phosphate-removing activated sludges from sequencing batch reactors
-
Bond, P. L., Hugenholtz, P., Keller, J. & Blackall, L. L. (1995). Bacterial community structures of phosphate-removing and non-phosphate-removing activated sludges from sequencing batch reactors. Appl Environ Microbiol 61, 1910-1916.
-
(1995)
Appl. Environ. Microbiol.
, vol.61
, pp. 1910-1916
-
-
Bond, P.L.1
Hugenholtz, P.2
Keller, J.3
Blackall, L.L.4
-
7
-
-
0032883808
-
Identification of some of the major groups of bacteria in efficient and nonefficient biological phosphorus removal activated sludge systems
-
Bond, P. L., Erhart, R., Wagner, M., Keller, J. & Blackall, L. L. (1999a). Identification of some of the major groups of bacteria in efficient and nonefficient biological phosphorus removal activated sludge systems. Appl Environ Microbiol 65, 4077-4084.
-
(1999)
Appl. Environ. Microbiol.
, vol.65
, pp. 4077-4084
-
-
Bond, P.L.1
Erhart, R.2
Wagner, M.3
Keller, J.4
Blackall, L.L.5
-
8
-
-
0032942666
-
Bio-P and non-bio-P bacteria identification by a novel microbial approach
-
Bond, P. L., Keller, J. & Blackall, L. L. (1999b). Bio-P and non-bio-P bacteria identification by a novel microbial approach. Water Sci Technol 39, 13-20.
-
(1999)
Water Sci. Technol.
, vol.39
, pp. 13-20
-
-
Bond, P.L.1
Keller, J.2
Blackall, L.L.3
-
9
-
-
0019513663
-
Gene organization and primary structure of a ribosomal RNA operon from Escherichia coli
-
Brosius, J., Dull, T. L., Steeter, D. D. & Noller, H. F. (1981). Gene organization and primary structure of a ribosomal RNA operon from Escherichia coli. J Mol Biol 148, 107-127.
-
(1981)
J. Mol. Biol.
, vol.148
, pp. 107-127
-
-
Brosius, J.1
Dull, T.L.2
Steeter, D.D.3
Noller, H.F.4
-
10
-
-
0034051181
-
Identification of polyphosphate-accumulating organisms and design of 16S rRNA-directed probes for their detection and quantitation
-
Crocetti, G. R., Hugenholtz, P., Bond, P. L., Schuler, A., Keller, J., Jenkins, D. & Blackall, L. L. (2000). Identification of polyphosphate-accumulating organisms and design of 16S rRNA-directed probes for their detection and quantitation. Appl Environ Microbiol 66, 1175-1182.
-
(2000)
Appl. Environ. Microbiol.
, vol.66
, pp. 1175-1182
-
-
Crocetti, G.R.1
Hugenholtz, P.2
Bond, P.L.3
Schuler, A.4
Keller, J.5
Jenkins, D.6
Blackall, L.L.7
-
11
-
-
0041461927
-
Glycogen-accumulating organisms in laboratory-scale and full-scale wastewater treatment processes
-
Crocetti, G. R., Banfield, J. F., Keller, J., Bond, P. L. & Blackall, L. L. (2002). Glycogen-accumulating organisms in laboratory-scale and full-scale wastewater treatment processes. Microbiology 148, 3353-3364.
-
(2002)
Microbiology
, vol.148
, pp. 3353-3364
-
-
Crocetti, G.R.1
Banfield, J.F.2
Keller, J.3
Bond, P.L.4
Blackall, L.L.5
-
12
-
-
0035016315
-
Characterisation of the microbial 16S rDNA diversity of an aerobic phosphorus-removal ecosystem and monitoring of its transition to nitrate respiration
-
Dabert, P., Sialve, B., Delgenès, J.-P., Moletta, R. & Godon, J.-J. (2001). Characterisation of the microbial 16S rDNA diversity of an aerobic phosphorus-removal ecosystem and monitoring of its transition to nitrate respiration. Appl Microbiol Biotechnol 55, 500-509.
-
(2001)
Appl. Microbiol. Biotechnol.
, vol.55
, pp. 500-509
-
-
Dabert, P.1
Sialve, B.2
Delgenès, J.-P.3
Moletta, R.4
Godon, J.-J.5
-
13
-
-
0344172842
-
The domain-specific probe EUB338 is insufficient for the detection of all bacteria: Development and evaluation of a more comprehensive probe set
-
Daims, H., Brühl, A., Amann, R., Schleifer, K.-H. & Wagner, M. (1999). The domain-specific probe EUB338 is insufficient for the detection of all bacteria: development and evaluation of a more comprehensive probe set. Syst Appl Microbiol 22, 434-444.
-
(1999)
Syst. Appl. Microbiol.
, vol.22
, pp. 434-444
-
-
Daims, H.1
Brühl, A.2
Amann, R.3
Schleifer, K.-H.4
Wagner, M.5
-
14
-
-
0024507744
-
Phylogenetic stains: Ribosomal RNA based probes for the identification of single cells
-
DeLong, E. F., Wickham, G. S. & Pace, N. R. (1989). Phylogenetic stains: ribosomal RNA based probes for the identification of single cells. Science 243, 1360-1363.
-
(1989)
Science
, vol.243
, pp. 1360-1363
-
-
DeLong, E.F.1
Wickham, G.S.2
Pace, N.R.3
-
15
-
-
0035163571
-
Investigation of candidate division TM7, a recently recognized major lineage of the Domain Bacteria with no known pure-culture representatives
-
Hugenholtz, P., Tyson, G. W., Webb, R. I., Wagner, A. M. & Blackall, L. L. (2001). Investigation of candidate division TM7, a recently recognized major lineage of the Domain Bacteria with no known pure-culture representatives. Appl Environ Microbiol 67, 411-419.
-
(2001)
Appl. Environ. Microbiol.
, vol.67
, pp. 411-419
-
-
Hugenholtz, P.1
Tyson, G.W.2
Webb, R.I.3
Wagner, A.M.4
Blackall, L.L.5
-
16
-
-
0032147190
-
Combined molecular and conventional analyses of nitrifying bacterium diversity in activated sludge: Nitrococcus mobilis and Nitrospira-like bacteria as dominant populations
-
Juretschko, S., Timmermann, G., Schmid, M., Schleifer, K.-H., Pommerening-Röser, A., Koops, H.-P. & Wagner, M. (1998). Combined molecular and conventional analyses of nitrifying bacterium diversity in activated sludge: Nitrococcus mobilis and Nitrospira-like bacteria as dominant populations. Appl Environ Microbiol 64, 3042-3051.
-
(1998)
Appl. Environ. Microbiol.
, vol.64
, pp. 3042-3051
-
-
Juretschko, S.1
Timmermann, G.2
Schmid, M.3
Schleifer, K.-H.4
Pommerening-Röser, A.5
Koops, H.-P.6
Wagner, M.7
-
17
-
-
0036860619
-
Diversity and distribution of a deeply branched novel proteobacterial group found in anaerobic-aerobic activated sludge processes
-
Kong, Y., Ong, S. L., Ng, W. J. & Liu, W.-T. (2002). Diversity and distribution of a deeply branched novel proteobacterial group found in anaerobic-aerobic activated sludge processes. Environ Microbiol 4, 753-757.
-
(2002)
Environ. Microbiol.
, vol.4
, pp. 753-757
-
-
Kong, Y.1
Ong, S.L.2
Ng, W.J.3
Liu, W.-T.4
-
18
-
-
0001857117
-
16S/23S rRNA sequencing
-
Edited by E. Stackebrandt & M. Goodfellow. London: Wiley
-
Lane, D. J. (1991). 16S/23S rRNA sequencing. In Nucleic Acid Techniques in Bacterial Systematics, pp. 115-175. Edited by E. Stackebrandt & M. Goodfellow. London: Wiley.
-
(1991)
Nucleic Acid Techniques in Bacterial Systematics
, pp. 115-175
-
-
Lane, D.J.1
-
19
-
-
0037995022
-
Oligonucleotide probes for in situ hybridisation
-
Edited by J. M. Polak & J. O. McGee. Oxford: Oxford University Press
-
Lathe, R. (1990). Oligonucleotide probes for in situ hybridisation. In In situ Hybridisation - Principles and Practice, pp. 71-80. Edited by J. M. Polak & J. O. McGee. Oxford: Oxford University Press.
-
(1990)
In Situ Hybridisation - Principles and Practice
, pp. 71-80
-
-
Lathe, R.1
-
20
-
-
0034024398
-
Microbial community changes in biological phosphate-removal systems on altering sludge phosphorus content
-
Liu, W.-T., Linning, K. D., Nakamura, K., Mino, T., Matsuo, T. & Forney, L. J. (2000). Microbial community changes in biological phosphate-removal systems on altering sludge phosphorus content. Microbiology 146, 1099-1107.
-
(2000)
Microbiology
, vol.146
, pp. 1099-1107
-
-
Liu, W.-T.1
Linning, K.D.2
Nakamura, K.3
Mino, T.4
Matsuo, T.5
Forney, L.J.6
-
21
-
-
0035210650
-
In situ identification of polyphosphate- and polyhydroxy-alkanoate-accumulating traits for microbial populations in a biological phosphorus removal process
-
Liu, W.-T., Nielsen, A. T., Wu, J.-H., Tsai, C.-S., Matsuo, T. & Molin, S. (2001). In situ identification of polyphosphate- and polyhydroxy-alkanoate-accumulating traits for microbial populations in a biological phosphorus removal process. Environ Microbiol 3, 110-122.
-
(2001)
Environ. Microbiol.
, vol.3
, pp. 110-122
-
-
Liu, W.-T.1
Nielsen, A.T.2
Wu, J.-H.3
Tsai, C.-S.4
Matsuo, T.5
Molin, S.6
-
22
-
-
0003086130
-
Activated sludge: Molecular techniques for determining community composition
-
Edited by G. Bitton. New York: Wiley
-
Loy, A., Daims, H. & Wagner, M. (2002). Activated sludge: molecular techniques for determining community composition. In The Encyclopedia of Environmental Microbiology, pp. 26-43. Edited by G. Bitton. New York: Wiley.
-
(2002)
The Encyclopedia of Environmental Microbiology
, pp. 26-43
-
-
Loy, A.1
Daims, H.2
Wagner, M.3
-
23
-
-
0002803581
-
Overview: A phylogenetic backbone and taxonomic framework for procaryotic systematics
-
Edited by D. R. Boone, R. W. Castenholz & G. M. Garrity. New York: Springer
-
Ludwig, W. & Klenk, H.-P. (2001). Overview: a phylogenetic backbone and taxonomic framework for procaryotic systematics. In Bergey's Manual of Systematic Bacteriology, pp. 49-65. Edited by D. R. Boone, R. W. Castenholz & G. M. Garrity. New York: Springer.
-
(2001)
Bergey's Manual of Systematic Bacteriology
, pp. 49-65
-
-
Ludwig, W.1
Klenk, H.-P.2
-
24
-
-
0029143037
-
Comparative analysis of 23S rRNA from Proteobacteria
-
14 other authors
-
Ludwig, W., Rosselló-Mora, R., Aznar, R. & 14 other authors (1995). Comparative analysis of 23S rRNA from Proteobacteria. Syst Appl Microbiol 18, 164-188.
-
(1995)
Syst. Appl. Microbiol.
, vol.18
, pp. 164-188
-
-
Ludwig, W.1
Rosselló-Mora, R.2
Aznar, R.3
-
25
-
-
0027068041
-
Phylogenetic oligonucleotide probes for the major subclasses of proteobacteria: Problems and solutions
-
Manz, W., Amann, R., Ludwig, W., Wagner, M. & Schleifer, K.-H. (1992). Phylogenetic oligonucleotide probes for the major subclasses of proteobacteria: problems and solutions. Syst Appl Microbiol 15, 593-600.
-
(1992)
Syst. Appl. Microbiol.
, vol.15
, pp. 593-600
-
-
Manz, W.1
Amann, R.2
Ludwig, W.3
Wagner, M.4
Schleifer, K.-H.5
-
26
-
-
0032985537
-
Identification of a novel group of bacteria in sludge from a deteriorated biological phosphorus removal reactor
-
Nielsen, A. T., Liu, W.-T., Filipe, C., Grady, L., Molin, S. & Stahl, D. A. (1999). Identification of a novel group of bacteria in sludge from a deteriorated biological phosphorus removal reactor. Appl Environ Microbiol 65, 1251-1258.
-
(1999)
Appl. Environ. Microbiol.
, vol.65
, pp. 1251-1258
-
-
Nielsen, A.T.1
Liu, W.-T.2
Filipe, C.3
Grady, L.4
Molin, S.5
Stahl, D.A.6
-
27
-
-
0028869650
-
The abundance of Zoogloea ramigera in sewage treatment plants
-
Rosselló-Mora, R. A., Wagner, M., Amann, R. & Schleifer, K.-H. (1995). The abundance of Zoogloea ramigera in sewage treatment plants. Appl Environ Microbiol 61, 702-707.
-
(1995)
Appl. Environ. Microbiol.
, vol.61
, pp. 702-707
-
-
Rosselló-Mora, R.A.1
Wagner, M.2
Amann, R.3
Schleifer, K.-H.4
-
28
-
-
0034096495
-
Molecular evidence for genus-level diversity of bacteria capable of catalyzing anaerobic ammonium oxidation
-
Schmid, M., Twachtmann, U., Klein, M., Strous, M., Juretschko, S., Jetten, M. S. M., Metzger, J. W., Schleifer, K.-H. & Wagner, M. (2000). Molecular evidence for genus-level diversity of bacteria capable of catalyzing anaerobic ammonium oxidation. Syst Appl Microbiol 23, 93-106.
-
(2000)
Syst. Appl. Microbiol.
, vol.23
, pp. 93-106
-
-
Schmid, M.1
Twachtmann, U.2
Klein, M.3
Strous, M.4
Juretschko, S.5
Jetten, M.S.M.6
Metzger, J.W.7
Schleifer, K.-H.8
Wagner, M.9
-
29
-
-
0035210373
-
16S-23S rDNA intergenic spacer and 23S rDNA of anaerobic ammonium-oxidizing bacteria: Implications for phylogeny and in situ detection
-
Schmid, M., Schmitz-Esser, S., Jetten, M. S. M. & Wagner, M. (2001). 16S-23S rDNA intergenic spacer and 23S rDNA of anaerobic ammonium-oxidizing bacteria: implications for phylogeny and in situ detection. Environ Microbiol 3, 450-459.
-
(2001)
Environ. Microbiol.
, vol.3
, pp. 450-459
-
-
Schmid, M.1
Schmitz-Esser, S.2
Jetten, M.S.M.3
Wagner, M.4
-
30
-
-
0027299353
-
Probing activated sludge with oligonucleotides specific for proteo-bacteria: Inadequacy of culture-dependent methods for describing microbial community structure
-
Wagner, M., Amann, R., Lemmer, H. & Schleifer, K.-H. (1993). Probing activated sludge with oligonucleotides specific for proteo-bacteria: Inadequacy of culture-dependent methods for describing microbial community structure. Appl Environ Microbiol 59, 1520-1525.
-
(1993)
Appl. Environ. Microbiol.
, vol.59
, pp. 1520-1525
-
-
Wagner, M.1
Amann, R.2
Lemmer, H.3
Schleifer, K.-H.4
-
31
-
-
0028569160
-
In situ analysis of microbial consortia in activated sludge using fluorescently labelled, rRNA-targeted oligonucleotide probes and confocal scanning laser microscopy
-
Wagner, M., Abmus, B., Hartmann, A., Hutzler, P. & Amann, R. (1994a). In situ analysis of microbial consortia in activated sludge using fluorescently labelled, rRNA-targeted oligonucleotide probes and confocal scanning laser microscopy. J Microsc 176, 181-187.
-
(1994)
J. Microsc.
, vol.176
, pp. 181-187
-
-
Wagner, M.1
Abmus, B.2
Hartmann, A.3
Hutzler, P.4
Amann, R.5
-
32
-
-
0028271364
-
Development of an rRNA-targeted oligonucleotide probe specific for the genus Acinetobacter and its application for in situ monitoring in activated sludge
-
Wagner, M., Erhart, R., Manz, W., Amann, R., Lemmer, H., Wedi, D. & Schleiffer, K.-H. (1994b). Development of an rRNA-targeted oligonucleotide probe specific for the genus Acinetobacter and its application for in situ monitoring in activated sludge. Appl Environ Microbiol 60, 792-800.
-
(1994)
Appl. Environ. Microbiol.
, vol.60
, pp. 792-800
-
-
Wagner, M.1
Erhart, R.2
Manz, W.3
Amann, R.4
Lemmer, H.5
Wedi, D.6
Schleiffer, K.-H.7
-
33
-
-
0031854206
-
Rapid purification of DNA from soil for molecular biodiversity analysis
-
Yeates, C. & Gillings, M. R. (1998). Rapid purification of DNA from soil for molecular biodiversity analysis. Lett Appl Microbiol 27, 49-53.
-
(1998)
Lett. Appl. Microbiol.
, vol.27
, pp. 49-53
-
-
Yeates, C.1
Gillings, M.R.2
|