-
1
-
-
0033522480
-
Solution structure of the HMG protein NHP6A and its interaction with DNA reveals the structural determinants for non sequence specific binding
-
Allain, F. H. T., M. Yen, J. E. Masse, P. Schultze, T. Dieckmann, R. C. Johnson, and J. Feigon, 1999, "Solution structure of the HMG protein NHP6A and its interaction with DNA reveals the structural determinants for non sequence specific binding," EMBO J. 18, 2563-2579.
-
(1999)
EMBO J.
, vol.18
, pp. 2563-2579
-
-
Allain, F.H.T.1
Yen, M.2
Masse, J.E.3
Schultze, P.4
Dieckmann, T.5
Johnson, R.C.6
Feigon, J.7
-
2
-
-
0015859467
-
Principles that govern the folding of protein chains
-
Anfinsen, C., 1973, "Principles that govern the folding of protein chains," Science 181, 223-230.
-
(1973)
Science
, vol.181
, pp. 223-230
-
-
Anfinsen, C.1
-
3
-
-
0034604105
-
A surprising simplicity to protein folding
-
Baker, D., 2000. "A surprising simplicity to protein folding," Nature (London) 405, 39-42.
-
(2000)
Nature (London)
, vol.405
, pp. 39-42
-
-
Baker, D.1
-
4
-
-
0032972986
-
Is protein folding hierarchic? I. Local structure and peptide folding
-
Baldwin, R. L., and G. D. Rose, 1999, "Is protein folding hierarchic? I. Local structure and peptide folding," Trends Biochem. Sci. 24, 26-33.
-
(1999)
Trends Biochem. Sci.
, vol.24
, pp. 26-33
-
-
Baldwin, R.L.1
Rose, G.D.2
-
5
-
-
0038342806
-
Geometry of compact tubes and protein structures
-
Banavar, J. R., A. Flammini, D. Marenduzzo, A. Maritan, and A. Trovato, 2003, "Geometry of compact tubes and protein structures," ComPlexUs 1, 4-13.
-
(2003)
ComPlexUs
, vol.1
, pp. 4-13
-
-
Banavar, J.R.1
Flammini, A.2
Marenduzzo, D.3
Maritan, A.4
Trovato, A.5
-
6
-
-
0037210315
-
Self-interactions of strands and sheets
-
Banavar, J. R., O. Gonzalez, J. H. Maddocks, and A. Maritan, 2003, "Self-interactions of strands and sheets," J. Slat. Phys. 110, 35-50.
-
(2003)
J. Slat. Phys.
, vol.110
, pp. 35-50
-
-
Banavar, J.R.1
Gonzalez, O.2
Maddocks, J.H.3
Maritan, A.4
-
7
-
-
0035283155
-
Computational approach to the protein folding problem
-
Banavar, J. R., and A. Maritan, 2001, "Computational approach to the protein folding problem," Proteins 42, 433-435.
-
(2001)
Proteins
, vol.42
, pp. 433-435
-
-
Banavar, J.R.1
Maritan, A.2
-
8
-
-
0037093649
-
Geometry and physics of proteins
-
Banavar, J. R., A. Maritan, C. Micheletti, and A. Trovato, 2002, "Geometry and physics of proteins," Proteins 47, 315-322.
-
(2002)
Proteins
, vol.47
, pp. 315-322
-
-
Banavar, J.R.1
Maritan, A.2
Micheletti, C.3
Trovato, A.4
-
9
-
-
0036836598
-
Anisotropic effective interactions in a coarse-grained tube picture of proteins
-
Banavar, J. R., A. Maritan, and F. Seno, 2002, "Anisotropic Effective Interactions in a Coarse-Grained Tube Picture of Proteins," Proteins 49, 246-254.
-
(2002)
Proteins
, vol.49
, pp. 246-254
-
-
Banavar, J.R.1
Maritan, A.2
Seno, F.3
-
10
-
-
0027292152
-
Three-dimensional structure of the alkalyne protease of pseudomonas aeruginosa: A two-domain protein with a calcium binding parallel beta roll motif
-
Baumann, U., S. Wu, K. M. Flaherty, and D. B. Mckay, 1993, "Three-dimensional structure of the alkalyne protease of pseudomonas aeruginosa: a two-domain protein with a calcium binding parallel beta roll motif," EMBO J. 12, 3357-3364.
-
(1993)
EMBO J.
, vol.12
, pp. 3357-3364
-
-
Baumann, U.1
Wu, S.2
Flaherty, K.M.3
McKay, D.B.4
-
11
-
-
0011429211
-
Structure of proteins
-
Bernal, J. D., 1939, "Structure of proteins," Nature (London) 143, 663-667.
-
(1939)
Nature (London)
, vol.143
, pp. 663-667
-
-
Bernal, J.D.1
-
12
-
-
0004204457
-
-
Garland, New York
-
Branden, C., and J. Tooze, 1999, Introduction to Protein Structure, 2nd ed. (Garland, New York).
-
(1999)
Introduction to Protein Structure, 2nd Ed.
-
-
Branden, C.1
Tooze, J.2
-
13
-
-
0028947257
-
Funnels, pathways and the energy landscape of protein folding: A synthesis
-
Bryngelson, J. D., J. N. Onuchic, N. D. Socci, and P. G. Wolynes, 1995, "Funnels, pathways and the energy landscape of protein folding: A synthesis," Proteins 21, 167-195.
-
(1995)
Proteins
, vol.21
, pp. 167-195
-
-
Bryngelson, J.D.1
Onuchic, J.N.2
Socci, N.D.3
Wolynes, P.G.4
-
14
-
-
0023449962
-
Spin glasses and the statistical-mechanics of protein folding
-
Bryngelson, J. D., and P. G. Wolynes, 1987, "Spin glasses and the statistical-mechanics of protein folding," Proc. Natl. Acad. Sci. U.S.A. 84, 7524-7528.
-
(1987)
Proc. Natl. Acad. Sci. U.S.A.
, vol.84
, pp. 7524-7528
-
-
Bryngelson, J.D.1
Wolynes, P.G.2
-
15
-
-
0003517281
-
-
Cambridge University Press, Cambridge, England
-
Chaikin, P. M., and T. C. Lubensky, 1995, Principles of Condensed Matter Physics (Cambridge University Press, Cambridge, England).
-
(1995)
Principles of Condensed Matter Physics
-
-
Chaikin, P.M.1
Lubensky, T.C.2
-
16
-
-
0031591383
-
The structure of an RNA 'kissing' hairpin complex of the HIV tar hairpin loop and its complement
-
Chang, K. Y., and I. Tinoco, 1997, "The Structure of an RNA 'kissing' hairpin complex of the HIV tar hairpin loop and its complement," J. Mol. Biol. 269, 52-66.
-
(1997)
J. Mol. Biol.
, vol.269
, pp. 52-66
-
-
Chang, K.Y.1
Tinoco, I.2
-
17
-
-
0021118508
-
Principles that determine the structure of proteins
-
Chothia, C., 1984, "Principles that determine the structure of proteins," Annu. Rev. Biochem. 53, 537-572.
-
(1984)
Annu. Rev. Biochem.
, vol.53
, pp. 537-572
-
-
Chothia, C.1
-
18
-
-
0027122748
-
One thousand families for the molecular biologist
-
Chothia, C., 1992, "One thousand families for the molecular biologist," Nature (London) 357, 543-544.
-
(1992)
Nature (London)
, vol.357
, pp. 543-544
-
-
Chothia, C.1
-
19
-
-
0004140795
-
-
Freeman, New York
-
Creighton, T. E., 1993, Proteins, Structure and Molecular Properties, 2nd ed. (Freeman, New York).
-
(1993)
Proteins, Structure and Molecular Properties, 2nd Ed.
-
-
Creighton, T.E.1
-
20
-
-
0035932508
-
Laws of form revisited
-
Denton, M., and C. Marshall, 2001, "Laws of form revisited," Nature (London) 410, 417-417.
-
(2001)
Nature (London)
, vol.410
, pp. 417-417
-
-
Denton, M.1
Marshall, C.2
-
21
-
-
1842298212
-
From Levinthal to pathways to funnels
-
Dill, K. A., and H. S. Chan, 1997, "From Levinthal to pathways to funnels," Nat. Struct. Biol. 4, 10-19.
-
(1997)
Nat. Struct. Biol.
, vol.4
, pp. 10-19
-
-
Dill, K.A.1
Chan, H.S.2
-
22
-
-
0033200063
-
Protein misfolding, evolution and disease
-
Dobson, C. M., 1999, "Protein misfolding, evolution and disease," Trends Biochem. Sci. 24, 329-332.
-
(1999)
Trends Biochem. Sci.
, vol.24
, pp. 329-332
-
-
Dobson, C.M.1
-
23
-
-
0037102362
-
Protein-misfolding diseases: Getting out of shape
-
Dobson, C. M., 2002, "Protein-misfolding diseases: Getting out of shape," Nature (London) 418, 729-730.
-
(2002)
Nature (London)
, vol.418
, pp. 729-730
-
-
Dobson, C.M.1
-
27
-
-
0033608997
-
Global curvature, thickness and the ideal shapes of knots
-
Gonzalez, O., and J. H. Maddocks, 1999, "Global curvature, thickness and the ideal shapes of knots," Proc. Natl. Acad. Sci. U.S.A. 96, 4769-4773.
-
(1999)
Proc. Natl. Acad. Sci. U.S.A.
, vol.96
, pp. 4769-4773
-
-
Gonzalez, O.1
Maddocks, J.H.2
-
28
-
-
0031000649
-
An evolutionary treasure: Unification of a broad set of amidohydrolases related to urease
-
Holm, L., and C. Sander, 1997, "An evolutionary treasure: unification of a broad set of amidohydrolases related to urease," Proteins 28, 72-82.
-
(1997)
Proteins
, vol.28
, pp. 72-82
-
-
Holm, L.1
Sander, C.2
-
29
-
-
0027992140
-
The origins of protein secondary structure
-
Hunt, N. G., L. M. Gregoret, and F. E. Cohen, 1994, "The origins of protein secondary structure," J. Mol. Biol. 241, 214-225.
-
(1994)
J. Mol. Biol.
, vol.241
, pp. 214-225
-
-
Hunt, N.G.1
Gregoret, L.M.2
Cohen, F.E.3
-
30
-
-
0035427398
-
Protein flexibility predictions using graph theory
-
Jacobs, D. J., A. J. Rader, L. A. Kuhn, and M. F. Thorpe, 2001, "Protein flexibility predictions using graph theory," Proteins 44, 150-165.
-
(2001)
Proteins
, vol.44
, pp. 150-165
-
-
Jacobs, D.J.1
Rader, A.J.2
Kuhn, L.A.3
Thorpe, M.F.4
-
31
-
-
23444436172
-
Protein design by binary patterning of polar and non-polar amino acids
-
Kamtekar, S., J. M. Schiffer, H. Y. Xiong, J. M. Babik, and M. H. Hecht, 1993, "Protein design by binary patterning of polar and non-polar amino acids," Science 262, 1680-1685.
-
(1993)
Science
, vol.262
, pp. 1680-1685
-
-
Kamtekar, S.1
Schiffer, J.M.2
Xiong, H.Y.3
Babik, J.M.4
Hecht, M.H.5
-
32
-
-
0029906723
-
Geometry and physics of knots
-
Katritch, V., J. Bednar, D. Michoud, R. G. Scharein, J. Dubochet, and A. Stasiak, 1996, "Geometry and physics of knots," Nature (London) 384, 142-145.
-
(1996)
Nature (London)
, vol.384
, pp. 142-145
-
-
Katritch, V.1
Bednar, J.2
Michoud, D.3
Scharein, R.G.4
Dubochet, J.5
Stasiak, A.6
-
33
-
-
0019332167
-
How different amino acid sequences determine similar protein structures: The structure and evolutionary dynamics of globins
-
Lesk, A. M., and C. Chothia, 1980, "How different amino acid sequences determine similar protein structures: the structure and evolutionary dynamics of globins," J. Mol. Biol. 136, 225-270.
-
(1980)
J. Mol. Biol.
, vol.136
, pp. 225-270
-
-
Lesk, A.M.1
Chothia, C.2
-
34
-
-
0017309766
-
Structural patterns in globular proteins
-
Levitt, M., and C. Chothia, 1976, "Structural patterns in globular proteins," Nature (London) 261, 552-558.
-
(1976)
Nature (London)
, vol.261
, pp. 552-558
-
-
Levitt, M.1
Chothia, C.2
-
35
-
-
0034719580
-
Role of secondary motifs in fast folding polymers: A dynamical variational principle
-
Maritan, A., C. Micheletti, and J. R. Banavar, 2000, "Role of secondary motifs in fast folding polymers: a dynamical variational principle," Phys. Rev. Lett. 84, 3009-3012.
-
(2000)
Phys. Rev. Lett.
, vol.84
, pp. 3009-3012
-
-
Maritan, A.1
Micheletti, C.2
Banavar, J.R.3
-
36
-
-
0034691565
-
Optimal shapes of compact strings
-
Maritan, A., C. Micheletti, A. Trovato, and J. R. Banavar, 2000, "Optimal shapes of compact strings," Nature (London) 406, 287-290.
-
(2000)
Nature (London)
, vol.406
, pp. 287-290
-
-
Maritan, A.1
Micheletti, C.2
Trovato, A.3
Banavar, J.R.4
-
37
-
-
18344391877
-
Protein structures and optimal folding from a geometrical variational principle
-
Micheletti, C., J. R. Banavar, A. Maritan, and F. Seno, 1999, "Protein structures and optimal folding from a geometrical variational principle," Phys. Rev. Lett. 82, 3372-3375.
-
(1999)
Phys. Rev. Lett.
, vol.82
, pp. 3372-3375
-
-
Micheletti, C.1
Banavar, J.R.2
Maritan, A.3
Seno, F.4
-
38
-
-
0000573263
-
Conformations of polypeptide chains with favored orientations around single bonds: Two new pleated sheets
-
Pauling, L., and R. B. Corey, 1951, "Conformations of polypeptide chains with favored orientations around single bonds: two new pleated sheets," Proc. Natl. Acad. Sci. U.S.A. 37, 729-740.
-
(1951)
Proc. Natl. Acad. Sci. U.S.A.
, vol.37
, pp. 729-740
-
-
Pauling, L.1
Corey, R.B.2
-
39
-
-
76549252207
-
The structure of proteins: Two hydrogen-bonded helical conformations of the polypeptide chain
-
Pauling, L., R. B. Corey, and H. R. Branson, 1951, "The structure of proteins: two hydrogen-bonded helical conformations of the polypeptide chain," Proc. Natl. Acad. Sci. U.S.A. 37, 205-211.
-
(1951)
Proc. Natl. Acad. Sci. U.S.A.
, vol.37
, pp. 205-211
-
-
Pauling, L.1
Corey, R.B.2
Branson, H.R.3
-
40
-
-
0014381393
-
Conformations of polypeptides and proteins
-
Ramachandran, G. N., and V. Sasisekharan, 1968, "Conformations of polypeptides and proteins," Adv. Protein Chem. 23, 283-438.
-
(1968)
Adv. Protein Chem.
, vol.23
, pp. 283-438
-
-
Ramachandran, G.N.1
Sasisekharan, V.2
-
41
-
-
0017387723
-
β-sheet topology and the relatedness of proteins
-
Richardson, J. S., 1997, "β-sheet topology and the relatedness of proteins," Nature (London) 268, 495-500.
-
(1997)
Nature (London)
, vol.268
, pp. 495-500
-
-
Richardson, J.S.1
-
42
-
-
0009218596
-
No assembly required
-
Rose, G. D., 1996, "No assembly required," Sciences (N.Y.) 36, 26-31.
-
(1996)
Sciences (N.Y.)
, vol.36
, pp. 26-31
-
-
Rose, G.D.1
-
43
-
-
0026030641
-
Database of homology-derived protein structures and the structural meaning of sequence alignment
-
Sander, C., and R. Schneider, 1991, "Database of homology-derived protein structures and the structural meaning of sequence alignment," Proteins 9, 56-68.
-
(1991)
Proteins
, vol.9
, pp. 56-68
-
-
Sander, C.1
Schneider, R.2
-
44
-
-
0033100060
-
Scaling, universality and renormalization: Three pillars of modern critical phenomena
-
Stanley, H. E., 1999, "Scaling, universality and renormalization: three pillars of modern critical phenomena," Rev. Mod. Phys. 71, S358-S366.
-
(1999)
Rev. Mod. Phys.
, vol.71
-
-
Stanley, H.E.1
-
45
-
-
0034691422
-
Mathematics - Best packing in proteins and DNA
-
Stasiak, A., and J. H. Maddocks, 2000, "Mathematics - Best packing in proteins and DNA," Nature (London) 406, 251-253.
-
(2000)
Nature (London)
, vol.406
, pp. 251-253
-
-
Stasiak, A.1
Maddocks, J.H.2
-
47
-
-
0028124611
-
Does compactness induce secondary structure in proteins?
-
Yee, D. P., H. S. Chan, T. F. Havel, and K. A. Dill, 1994, "Does compactness induce secondary structure in proteins?," J. Mol. Biol. 241, 557-573.
-
(1994)
J. Mol. Biol.
, vol.241
, pp. 557-573
-
-
Yee, D.P.1
Chan, H.S.2
Havel, T.F.3
Dill, K.A.4
-
48
-
-
0038497542
-
A structure for deoxyribose nucleic acid
-
Watson, J. D., and F. H. C. Crick, 1953, "A structure for deoxyribose nucleic acid," Nature (London) 171, 737.
-
(1953)
Nature (London)
, vol.171
, pp. 737
-
-
Watson, J.D.1
Crick, F.H.C.2
-
49
-
-
0033613188
-
De novo amyloid proteins from designed combinatorial libraries
-
West, M. W., et al., 1999, "De novo amyloid proteins from designed combinatorial libraries," Proc. Natl. Acad. Sci. U.S.A. 96, 11 211-11 216.
-
(1999)
Proc. Natl. Acad. Sci. U.S.A.
, vol.96
, pp. 11211-11216
-
-
West, M.W.1
|