Molecular characterization of NbPAF encoding the α6 subunit of the 20S proteasome in Nicotiana benthamiana

Molecules and Cells

Volumn 15, Issue 1, 2003, Pages 127-132

  Kim, Moonil ^a,b   Yang, Kyoung Sil ^a   Kim, Yu Kyung ^a   Paek, Kyung Hee ^b   Pai, Hyun Sook ^a  

^a Korea Research Institute of Bioscience and Biotechnology (KRIBB)   (South Korea)

^b Korea University   (South Korea)

Author keywords

Inducible Expression; Plant Defense Response; Single Gene; Subcellular Localization

Indexed keywords

ABSCISIC ACID; HYBRID PROTEIN; JASMONIC ACID METHYL ESTER; MESSENGER RNA; PROTEASOME; PROTEASOME ALPHA 6; SALICYLIC ACID; SODIUM CHLORIDE; UNCLASSIFIED DRUG; ACETIC ACID DERIVATIVE; ARABIDOPSIS PROTEIN; CYCLOPENTANE DERIVATIVE; CYSTEINE PROTEINASE; MULTIENZYME COMPLEX; PHYTOHORMONE; PLANT DNA; PROTEIN SUBUNIT; SACCHAROMYCES CEREVISIAE PROTEIN; VEGETABLE PROTEIN;

AMINO ACID SEQUENCE; ARABIDOPSIS; ARTICLE; CELLULAR DISTRIBUTION; ENZYME ANALYSIS; ENZYME SUBUNIT; GENE; GENE SEQUENCE; MOLECULAR GENETICS; NBPAF GENE; NONHUMAN; NUCLEAR LOCALIZATION SIGNAL; PLANT GENETICS; PLANT MORPHOLOGY; PROTEIN LOCALIZATION; SOUTHERN BLOTTING; TOBACCO; ANTIBODY SPECIFICITY; BIOLISTIC TRANSFORMATION; BIOSYNTHESIS; CELL NUCLEUS; CHEMISTRY; COLD; COMPARATIVE STUDY; CYTOLOGY; CYTOPLASM; DRUG EFFECT; ENZYME INDUCTION; ENZYMOLOGY; GENETICS; HUMAN; ONION; PHYLOGENY; PLANT; SEQUENCE ALIGNMENT; SEQUENCE HOMOLOGY; SPECIES DIFFERENCE;

ARABIDOPSIS; NICOTIANA BENTHAMIANA; NICOTIANA TABACUM;

ABSCISIC ACID; ACETIC ACIDS; AMINO ACID SEQUENCE; ARABIDOPSIS PROTEINS; BIOLISTICS; CELL NUCLEUS; COLD; CYCLOPENTANES; CYSTEINE ENDOPEPTIDASES; CYTOPLASM; DNA, PLANT; ENZYME INDUCTION; GENES, PLANT; HUMANS; MOLECULAR SEQUENCE DATA; MULTIENZYME COMPLEXES; ONIONS; ORGAN SPECIFICITY; PHYLOGENY; PLANT COMPONENTS; PLANT GROWTH REGULATORS; PLANT PROTEINS; PROTEASOME ENDOPEPTIDASE COMPLEX; PROTEIN SUBUNITS; RECOMBINANT FUSION PROTEINS; SACCHAROMYCES CEREVISIAE PROTEINS; SALICYLIC ACID; SEQUENCE ALIGNMENT; SEQUENCE HOMOLOGY, AMINO ACID; SODIUM CHLORIDE; SPECIES SPECIFICITY; TOBACCO;

EID: 0037840548     PISSN: 10168478     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (25)

1. Baumeister, W., Walz, J., Zühl, F., and Seemüller, E. (1998) The proteasome: paradigm of a self-compartmentalizing protease. Cell 92, 367-380.
2. Becker, F., Buschfeld, E., Schell, J., and Bachmair, A. (1993) Altered response to viral infection by tobacco plants perturbed in ubiquitin system. Plant J. 3, 875-881.
3. Belknap, W. R. and Garbarino, J. E. (1996) The role of ubiquitin in plant senescence and stress responses. Trends Plant Sci. 1, 331-335.
4. Callis, J. and Vierstra, R. D. (2000) Protein degradation in signaling. Curr. Opin. Plant Biol. 3, 381-386.
5. Coux, O., Tanaka, K., and Goldberg, A. L. (1996) Structure and functions of the 20S proteasomes. Annu. Rev. Biochem. 65, 801-847.
6. Emori, Y., Tsukahara, T., Kawasaki, H., Ishiura, S., Sugita, H., and Suzuki, K. (1991) Molecular cloning and functional analysis of three subunits of the yeast proteasome. Mol. Cell. Biol. 11, 344-353.
7. Enenckel, C., Lehmann, A., and Kloetzel, P.-M. (1998) Subcellular distribution of proteasomes implicates a major location of protein degradation in the nuclear envelope-ER network in yeast. EMBO J. 17, 6144-6154.
8. Fu, H., Doelling, J. H., Arendt, C. S., Hochstrasser, M., and Vierstra, R. D. (1998) Molecular organization of the 20S proteasome gene family from Arabidopsis thaliana. Genetics 149, 677-692.
9. Genschik, P., Parmentier, Y., Durr, A., Marbach, J., Criqui, M. C., Jamet, E., and Fleck, J. (1992) Ubiquitin genes are differentially regulated in protoplast-derived cultures of Nicotiana sylvestris and in response to various stresses. Plant Mol. Biol. 20, 897-910.
10. Genschik, P., Jamet, E., Philipps, G., Parmentier, Y., Gigot, C., and Fleck, J. (1994) Molecular characterization of a beta-type proteasome subunit from Arabidopsis thaliana co-expressed at a high level with an alpha-type proteasome subunit early in the cell cycle. Plant J. 6, 537-546.
11. Genschik, P., Criqui, M. C., Parmentier, Y., Derevier, A., and Fleck, J. (1998) Cell cycle-dependent proteolysis in plants: identification of the destruction box pathway and metaphase arrest produced by the proteasome inhibitor MG132. Plant Cell 10, 2063-2075.
12. Gindin, E. and Borochov, A. (1992) Ubiquitin conjugation to protein increases following chilling in clerodendrum leaves. Plant Physiol. 100, 1392-1395.
13. Girod, P.-A., Fu, H., Zryd, J. P., and Vierstra, R. D. (1999) Multiubiquitin chain binding subunit MCB1 (RPN10) of the 26S proteasome is essential for developmental progression in Physcomitrella patens. Plant Cell 11, 1457-1471.
14. Hershko, A. and Ciechanover, A. (1998) The ubiquitin system. Annu. Rev. Biochem. 67, 425-479
15. Hilt, W. and Wolf, D. H. (1996) Proteasomes: destruction as a programme. Trends Biochem. Sci. 21, 96-102.
16. Hochstrasser, M. (1996) Ubiquitin-dependent protein degradation. Annu. Rev. Genet. 30, 405-439.
17. Hong, S. H., Ahn, J. Y., Lee, C. S., Kang, M. S., Ha, D. B., Tanaka, K., and Chung, C. H. (1994) Tissue-specific expression of the subunits of chick 20S proteasomes. Biochem. Mol. Int. 32, 723-729.
18. Kawahara, H. and Yokosawa, H. (1992) Cell cycle-dependent change of proteasome distribution during embryonic development of the ascidian Halocynthia roretzi. Dev. Biol. 151, 27-33.
19. Kim, M., Park, S.-W., Yu, S. H., Cho, H. S., Ha, H. J., Hwang, I., and Pai, H.-S. (2001) Molecular characterization of the NeIF2Bβ gene encoding a putative eIF2Bβ-subunit in Nicotiana tabacum. Mol. Cells 11, 110-114
20. Kiyosue, T., Yamaguchi-Shinozaki, K., and Shinozaki, K (1994) Cloning of cDNAs for genes that are early-responsive to dehydration stress (ERDs) in Arabidopsis thaliana L: identification of three ERDs as HSP cognate genes. Plant Mol. Biol. 25, 791-798.
21. Lee, S. S., Cho, H. S., Yoon, G. M., Ahn, J.-W., Liu, J. R., and Pai, H.-S. (2002) Interaction of NtCDPK1 calcium-dependent protein kinase with NtRpn3 regulatory subunit of the 26S proteasome in Nicotiana tabacum. Plant J. (in press).
22. Machiels, B. M., Henfling, M. E., Schutte, B., van Engelan, M., Broers, J. L., and Ramaekers, F. C. (1996) Subcellular localization of proteasomes in apoptotic lung tumor cells and persistence as compared to intermediate filaments. Eur. J. Cell Biol. 70, 250-259.
23. Palmer, A., Rivett, A. J., Thomson, S., Hendil, K. B., Butcher, G. W., Fuertes, G., and Knecht, E. (1996) Subpopulations of proteasomes in rat liver nuclei, microsomes and cytosol. Biochem. J. 316, 401-407.
24. Smith, M. W., Ito, M., Miyamaki, M., Sato, S., Yoshikawa, Y., Wada, S., Maki, H., Nakagawa, H., and Komamine, A. (1997) Plant 21D7 protein, a nuclear antigen associated with cell division, is a component of the 26S proteasome. Plant Physiol. 113, 281-291.
25. Voges, D., Zwickl, P., and Baumeister, W. (1999) The 26S proteasome: a molecular machine designed for controlled proteolysis. Annu. Rev. Biochem, 68, 1015-1068.