Complete mitochondrial DNA sequence of the swimming crab, Portunus trituberculatus (Crustacea: Decapoda: Brachyura)

Gene

Volumn 311, Issue 1-2, 2003, Pages 129-135

  Yamauchi, Mitsugu M ^a   Miya, Masaki U ^b   Nishida, Mutsumi ^a  

^a UNIVERSITY OF TOKYO   (Japan)

^b NATURAL HISTORY MUSEUM AND INSTITUTE   (Japan)

Author keywords

Gene rearrangements; Long PCR; Mitochondrial genome

Indexed keywords

MITOCHONDRIAL DNA; RIBOSOME RNA; TRANSFER RNA;

ARTICLE; CONTROLLED STUDY; CRAB; DNA SEQUENCE; DNA TEMPLATE; DOWN REGULATION; DROSOPHILA; GENE DELETION; GENE DUPLICATION; GENE LOCATION; GENE SEQUENCE; GENETIC VARIABILITY; GENOMICS; MITOCHONDRIAL GENETICS; NONHUMAN; NUCLEOTIDE SEQUENCE; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; SEQUENCE HOMOLOGY; SPECIES COMPARISON;

ARTHROPODA; BRACHYURA; CRUSTACEA; DECAPODA (CRUSTACEA); DROSOPHILA YAKUBA; PORTUNIDAE; PORTUNUS TRITUBERCULATUS;

EID: 0037633395     PISSN: 03781119     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0378-1119(03)00582-1     Document Type: Article

References (27)

1. Avise J.C. Phylogeography. 2000;Harvard Univ. Press, London.
2. Boore J.L. Animal mitochondrial genomes. Nucleic Acids Res. 27:1999;1767-1780.
3. Bowman T.E., Abele L.G. Classification of the recent Crustacea. Abele L.G. The Biology of Crustacea, Vol. 1: Systematics, the Fossil Record, and Biogeography. 1982;1-92 Academic Press, New York.
4. Cheng S., Chang S.-Y., Gravitt P., Respress R. Long PCR. Nature. 369:1994;684-685.
5. Clary D.O., Wolstenholme D.R. The mitochondrial DNA molecular of Drosophila yakuba: nucleotide sequence, gene organization and genetic codes. J. Mol. Evol. 22:1985;252-271.
6. Crease T.J. The complete sequence of the mitochondrial genome of Daphnia pulex (Cladocea: Crustacea). Gene. 233:1999;89-99.
7. Crozier R.H., Crozier Y.C. The mitochondrial genome of the honeybee Apis mellifera: complete sequence and genome organization. Genetics. 133:1993;97-117.
8. Folmer O., Black M., Hoeh R., Lutz R.A., Vrijenhoek R. DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates. Mol. Mar. Biol. Biotechnol. 3:1994;294-299.
9. Hickerson M.J., Cunningham C.W. Dramatic mitochondrial gene rearrangements in the hermit crab Pagurus longicarpus (Crustacea, Anomura). Mol. Biol. Evol. 17:2000;639-644.
10. Imai H., Fujii Y., Karakawa J. Analysis of the population structure of the swimming crab, Portunus trituberculatus in the coastal waters of Okayama Prefecture, by RFLPs in the whole region of mitochondrial DNA. Fish. Sci. 65:1999;655-656.
11. Kumazawa Y., Nishida M. Sequence evolution of mitochondrial tRNA genes and deep-branch animal phylogenetics. J. Mol. Evol. 37:1993;380-398.
12. Lavrov D.V., Boore J.L., Brown W.M. The complete mitochondrial DNA sequence of the horseshoe crab Limulus polyphemus. Mol. Biol. Evol. 17:2000;813-824.
13. Levinson G., Gutman G.A. Slipped-strand mispairing: a major mechanism for DNA sequence evolution. Mol. Biol. Evol. 4:1987;203-221.
14. Macey J.R., Schulte J.A., Larson A., Papenfuss T.J. Tandem duplication via light-strand synthesis may provide a precursor for mitochondrial genomic rearrangement. Mol. Biol. Evol. 15:1998;71-75.
15. Machida R.J., Miya M.U., Nishida M., Nishida S. Complete mitochondrial DNA sequence of Tigriopus japonicus (Crustacea: Copepoda). Mar. Biotechnol. 4:2002;406-417.
16. Miya M., Nishida M. Organization of the mitochondrial genome of a deep-sea fish, Gonostoma gracile (Teleostei: Stomiiformes): first example of transfer RNA gene rearrangements in bony fishes. Mar. Biotechnol. 1:1999;416-426.
17. Moritz C., Brown W.M. Tandem duplications in animal mitochondrial DNAs: variation in incidence and gene content among lizards. Proc. Natl. Acad. Sci. USA. 84:1987;7183-7187.
18. Ojala D., Montoya J., Attardi G. tRNA punctuation model of RNA processing in human mitochondria. Nature. 290:1981;470-474.
19. Reyes A., Gissi C., Pesole G., Saccone C. Asymmetrical directional mutation pressure in the mitochondrial genome of mammals. Mol. Biol. Evol. 15:1998;957-966.
20. Sakai T. Crabs of Japan and Adjacent Seas. 1976;Kodansha Ltd, Japan.
21. Shao R., Campbell N.J.H., Barker S.C. Numerous gene arrangements in mitochondrial genome of the wallaby louse, Heterodoxus macropus (Phthiraptera). Mol. Biol. Evol. 18:2001;858-865.
22. Simon C., Frati F., Bechenbach A., Crespi B., Liu H., Flook P. Evolution, weighting and phylogenetic utility of mitochondrial gene sequences and a compilation of conserved polymerase chain reaction primers. Ann. Entomol. Soc. Am. 87:1994;651-701.
23. Valverde J.R., Batuecas B., Moratilla C., Marco R., Garesse R. The complete mitochondrial DNA sequence of the crustacean Artemia franciscana. J. Mol. Evol. 39:1994;400-408.
24. Warner G.F. The Biology of Crabs. 1977;Elek Science, London.
25. Wilson K., Cahill V., Ballment E., Benzie J. The complete sequence of the mitochondrial genome of the crustacean Penaeus monodon: are malacostracan crustaceans more closely related to insects than to branchiopods? Mol. Biol. Evol. 17:2000;863-874.
26. Wolstenholme D.R. Animal mitochondrial DNA: structure and evolution. Int. Rev. Cytol. 141:1992;173-216.
27. Yamauchi M.M., Miya M.U., Nishida M. Complete mitochondrial DNA sequence of the Japanese spiny lobster, Panulirus japonicus (Crustacea: Decapoda). Gene. 295:2002;89-96.