Zerg: A very fast BLAST parser library

Bioinformatics

Volumn 19, Issue 8, 2003, Pages 1035-1036

  Paquola, Apuã C M ^a   Machado, Abimael A ^a   Reis, Eduardo M ^a   da Silva, Aline M ^a   Verjovski Almeida, Sergio ^a  

^a UNIVERSITY OF SÃO PAULO   (Brazil)

Author keywords

[No Author keywords available]

Indexed keywords

CONTIG; DNA;

ARTICLE; CALCULATION; CLUSTER ANALYSIS; COMPUTER INTERFACE; COMPUTER PROGRAM; CONTIG MAPPING; CONTROLLED STUDY; DNA LIBRARY; DNA SEQUENCE; EXPRESSED SEQUENCE TAG; GENETIC ANALYSIS; PRIORITY JOURNAL; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS;

EID: 0037606122     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/btg122     Document Type: Article

References (4)

1. Altschul,S. Madden,T. et al. (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res., 25, 3389-3402.
2. Burke,J., Davison,D. and Hide,W. (1999) d2uster: a validated method for clustering EST and full-length cDNAsequences. Genome Res., 9, 1135-1142.
3. Camargo,A Samaia,H. et al. (2001) The contribution of 700 000 'ORF sequence tags' to the definition of the human transcriptome. Proc. Natl Acad. Sci. USA, 98, 12 103-12 108.
4. Xing,L. and Brendel,V. (2001) Multi-query sequence BLAST output examination with MuSeqBox. Bioinformatics, 17, 744-745.