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Volumn 306, Issue 2, 2003, Pages 408-415

A common periodic table of codons and amino acids

Author keywords

Amino acid; Charge; Codon; Genetic code; Hydrophobicity; Nucleic acid; Periodic table; Polarity; Protein; Translation

Indexed keywords

AMINO ACID DERIVATIVE; GLYCINE DERIVATIVE; LYSINE DERIVATIVE; NUCLEIC ACID; PHENYLALANINE DERIVATIVE; PROLINE DERIVATIVE; PYRIMIDINE DERIVATIVE;

EID: 0037532606     PISSN: 0006291X     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0006-291X(03)00974-4     Document Type: Article
Times cited : (47)

References (37)
  • 2
    • 0014378880 scopus 로고
    • The origin of the genetic code
    • Crick F.H.C. The origin of the genetic code. J. Mol. Biol. 38:1968;367-379.
    • (1968) J. Mol. Biol. , vol.38 , pp. 367-379
    • Crick, F.H.C.1
  • 3
    • 0001119084 scopus 로고
    • Evolution of the genetic code
    • Wong J.T. Evolution of the genetic code. Microbiology. 5:1988;174-181.
    • (1988) Microbiology , vol.5 , pp. 174-181
    • Wong, J.T.1
  • 4
    • 0034002683 scopus 로고    scopus 로고
    • RNA-ligand chemistry: A testable source for the genetic code
    • Yarus M. RNA-ligand chemistry: a testable source for the genetic code. RNA. 6:2000;475-487.
    • (2000) RNA , vol.6 , pp. 475-487
    • Yarus, M.1
  • 6
    • 85031173443 scopus 로고    scopus 로고
    • Available from: http://www3.ncbi.nlm.nih.gov/Taxonomy/Utils/wprintgc.cgi?mode=t
    • Available from: http://www3.ncbi.nlm.nih.gov/Taxonomy/Utils/wprintgc.cgi?mode=t.
  • 7
    • 0037015858 scopus 로고    scopus 로고
    • Gene homology resources on the World Wide Web
    • Turchin A., Kohane I.S. Gene homology resources on the World Wide Web. Physiol. Genomics. 11:2002;165-177.
    • (2002) Physiol. Genomics , vol.11 , pp. 165-177
    • Turchin, A.1    Kohane, I.S.2
  • 8
    • 85031176214 scopus 로고    scopus 로고
    • Available from: http://www.blocks.fhcrc.org/
    • Available from: http://www.blocks.fhcrc.org/.
  • 9
    • 0035162594 scopus 로고    scopus 로고
    • RefSeq and LocusLink: NCBI gene-centered resources
    • Pruitt K.D., Maglott D.R. RefSeq and LocusLink: NCBI gene-centered resources. Nucleic Acids Res. 29:2001;137-140.
    • (2001) Nucleic Acids Res. , vol.29 , pp. 137-140
    • Pruitt, K.D.1    Maglott, D.R.2
  • 10
    • 85031165086 scopus 로고    scopus 로고
    • Available from: http://www.ncbi.nml.nih.gov/Database/index.html
    • Available from: http://www.ncbi.nml.nih.gov/Database/index.html.
  • 12
    • 85031166737 scopus 로고    scopus 로고
    • J.C. Biro, Overlapping translation of nucleic acids for bioinformatics applications, in: The International Conference on Bioinformatics 2002 (InCB2002), Bangkok, Thailand, 2002
    • J.C. Biro, Overlapping translation of nucleic acids for bioinformatics applications, in: The International Conference on Bioinformatics 2002 (InCB2002), Bangkok, Thailand, 2002.
  • 13
    • 0037403198 scopus 로고    scopus 로고
    • Overlapping translation of nucleic acids for bioinformatics applications
    • Biro J.C. Overlapping translation of nucleic acids for bioinformatics applications. Med. Hypotheses. 60:2003;654-659.
    • (2003) Med. Hypotheses , vol.60 , pp. 654-659
    • Biro, J.C.1
  • 14
    • 0022385890 scopus 로고
    • A multivariate study of the relationship between the genetic code and the physical-chemical properties of amino acids
    • Sjostrom M., Wold S. A multivariate study of the relationship between the genetic code and the physical-chemical properties of amino acids. J. Mol. Evol. 22:1985;272-277.
    • (1985) J. Mol. Evol. , vol.22 , pp. 272-277
    • Sjostrom, M.1    Wold, S.2
  • 15
    • 0022698136 scopus 로고
    • Symmetrical-asymmetrical codons and hydrophobic-hydrophilic amino acids
    • Portelli C., Portelli A.P., Cigani D. Symmetrical-asymmetrical codons and hydrophobic-hydrophilic amino acids. Physiologie. 23:1986;139-143.
    • (1986) Physiologie , vol.23 , pp. 139-143
    • Portelli, C.1    Portelli, A.P.2    Cigani, D.3
  • 16
    • 0019055919 scopus 로고
    • On the antisymmetry of the amino acid code table
    • Hasegawa M., Miyata T. On the antisymmetry of the amino acid code table. Orig. Life. 10:1980;265-270.
    • (1980) Orig. Life , vol.10 , pp. 265-270
    • Hasegawa, M.1    Miyata, T.2
  • 17
    • 0024438078 scopus 로고
    • Some aspects of the organization and evolution of the genetic code
    • Di Giulio M. Some aspects of the organization and evolution of the genetic code. J. Mol. Evol. 29:1989;191-201.
    • (1989) J. Mol. Evol. , vol.29 , pp. 191-201
    • Di Giulio, M.1
  • 18
    • 0033732744 scopus 로고    scopus 로고
    • The genetic code as a periodic table: Algebraic aspects
    • Bashford J.D., Jarvis P.D. The genetic code as a periodic table: algebraic aspects. Biosystems. 57:2000;147-161.
    • (2000) Biosystems , vol.57 , pp. 147-161
    • Bashford, J.D.1    Jarvis, P.D.2
  • 19
    • 0028339507 scopus 로고
    • Compositional frequencies of amino acids in the proteins and the genetic code
    • Siemion I.Z. Compositional frequencies of amino acids in the proteins and the genetic code. Biosystems. 32:1994;163-170.
    • (1994) Biosystems , vol.32 , pp. 163-170
    • Siemion, I.Z.1
  • 20
    • 0026890296 scopus 로고
    • A model of intra- and intermolecular interactions of peptide chains
    • Chipens G.I., Rudzish R.V. A model of intra- and intermolecular interactions of peptide chains. Ukr. Biokhim. Zh. 64:1992;20-28.
    • (1992) Ukr. Biokhim. Zh. , vol.64 , pp. 20-28
    • Chipens, G.I.1    Rudzish, R.V.2
  • 21
    • 0031662136 scopus 로고    scopus 로고
    • The genetic code is one in a million
    • Freeland S.J., Hurst L.D. The genetic code is one in a million. J. Mol. Evol. 47:1998;238-248.
    • (1998) J. Mol. Evol. , vol.47 , pp. 238-248
    • Freeland, S.J.1    Hurst, L.D.2
  • 22
    • 0024488958 scopus 로고
    • The code within the codons
    • Taylor F.J., Coates D. The code within the codons. Biosystems. 22:1989;177-187.
    • (1989) Biosystems , vol.22 , pp. 177-187
    • Taylor, F.J.1    Coates, D.2
  • 23
    • 0035820188 scopus 로고    scopus 로고
    • Topological nature of the genetic code
    • Karasev V.A., Stefanov V.E. Topological nature of the genetic code. J. Theor. Biol. 209:2001;303-317.
    • (2001) J. Theor. Biol. , vol.209 , pp. 303-317
    • Karasev, V.A.1    Stefanov, V.E.2
  • 24
    • 0034736516 scopus 로고    scopus 로고
    • Second codon positions of genes and the secondary structures of proteins. Relationships and implications for the origin of the genetic code
    • Chiusano M.L., Alvarez-Valin F., Di Giulio M., D'Onofrio G., Ammirato G., Colonna G., Bernardi G. Second codon positions of genes and the secondary structures of proteins. Relationships and implications for the origin of the genetic code. Gene. 261:2000;63-69.
    • (2000) Gene , vol.261 , pp. 63-69
    • Chiusano, M.L.1    Alvarez-Valin, F.2    Di Giulio, M.3    D'Onofrio, G.4    Ammirato, G.5    Colonna, G.6    Bernardi, G.7
  • 25
    • 0018191721 scopus 로고
    • The genetic code as a periodic table
    • Jungck J.R. The genetic code as a periodic table. J. Mol. Evol. 11:1978;211-224.
    • (1978) J. Mol. Evol. , vol.11 , pp. 211-224
    • Jungck, J.R.1
  • 26
    • 0027285584 scopus 로고
    • Neutral adaptation of the genetic code to double-strand coding
    • Konecny J., Eckert M., Schoniger M., Hofacker G.L. Neutral adaptation of the genetic code to double-strand coding. J. Mol. Evol. 36:1993;407-416.
    • (1993) J. Mol. Evol. , vol.36 , pp. 407-416
    • Konecny, J.1    Eckert, M.2    Schoniger, M.3    Hofacker, G.L.4
  • 27
    • 0019421541 scopus 로고
    • Comparative analysis of specificity in protein-protein interactions. Part II: The complementary coding of some proteins as the possible source of specificity in protein-protein interactions
    • Biro J. Comparative analysis of specificity in protein-protein interactions. Part II: The complementary coding of some proteins as the possible source of specificity in protein-protein interactions. Med. Hypotheses. 7:1981;981-993.
    • (1981) Med. Hypotheses , vol.7 , pp. 981-993
    • Biro, J.1
  • 28
    • 0036523474 scopus 로고    scopus 로고
    • Specific interactions between sense and complementary peptides: The basis for the proteomic code
    • Heal J.R., Roberts G.W., Raynes J.G., Bhakoo A., Miller A.D. Specific interactions between sense and complementary peptides: the basis for the proteomic code. Chembiochem. 3:2002;136-151.
    • (2002) Chembiochem , vol.3 , pp. 136-151
    • Heal, J.R.1    Roberts, G.W.2    Raynes, J.G.3    Bhakoo, A.4    Miller, A.D.5
  • 29
    • 0025400721 scopus 로고
    • Amino acid complementarity: Testing of hypotheses
    • Gabrielian A.E., Heymann S. Amino acid complementarity: testing of hypotheses. Biomed. Sci. 1:1990;311-313.
    • (1990) Biomed. Sci. , vol.1 , pp. 311-313
    • Gabrielian, A.E.1    Heymann, S.2
  • 30
    • 0023058997 scopus 로고
    • Frequent occurrence of short complementary sequences in nucleic acids
    • Segersten U., Nordgren H., Biro J. Frequent occurrence of short complementary sequences in nucleic acids. Biochem. Biophys. Res. Commun. 139:1986;94-101.
    • (1986) Biochem. Biophys. Res. Commun. , vol.139 , pp. 94-101
    • Segersten, U.1    Nordgren, H.2    Biro, J.3
  • 31
    • 0035092968 scopus 로고    scopus 로고
    • New hypothesis on amino acid complementarity and its evaluation on TGF-beta (2)-related peptides
    • Siemion I.Z., Zbozien-Pacamaj R., Stefanowicz P. New hypothesis on amino acid complementarity and its evaluation on TGF-beta (2)-related peptides. J. Mol. Recog. 14:2001;1-12.
    • (2001) J. Mol. Recog. , vol.14 , pp. 1-12
    • Siemion, I.Z.1    Zbozien-Pacamaj, R.2    Stefanowicz, P.3
  • 32
    • 37649026297 scopus 로고    scopus 로고
    • Specific interactions between sense and complementary peptides: The basis for the proteomic code
    • Heal J.R., Roberts G.W., Raynes J.G., Bhakoo A., Miller A.D. Specific interactions between sense and complementary peptides: the basis for the proteomic code. Chembiochem. 3:2002;271.
    • (2002) Chembiochem , vol.3 , pp. 271
    • Heal, J.R.1    Roberts, G.W.2    Raynes, J.G.3    Bhakoo, A.4    Miller, A.D.5
  • 33
    • 0019617869 scopus 로고
    • Are there structural analogies between amino acids and nucleic acids?
    • Hendry L.B., Bransome E.D. Jr., Petersheim M. Are there structural analogies between amino acids and nucleic acids? Orig. Life. 11:1981;203-221.
    • (1981) Orig. Life , vol.11 , pp. 203-221
    • Hendry, L.B.1    Bransome E.D., Jr.2    Petersheim, M.3
  • 34
    • 0021042798 scopus 로고
    • Stereochemical origins of the genetic code
    • Grafstein D. Stereochemical origins of the genetic code. J. Theor. Biol. 105:1983;157-174.
    • (1983) J. Theor. Biol. , vol.105 , pp. 157-174
    • Grafstein, D.1
  • 35
    • 0034002683 scopus 로고    scopus 로고
    • RNA-ligand chemistry: A testable source for the genetic code
    • Yarus M. RNA-ligand chemistry: a testable source for the genetic code. RNA. 6:2000;475-484.
    • (2000) RNA , vol.6 , pp. 475-484
    • Yarus, M.1
  • 36
    • 0032848426 scopus 로고    scopus 로고
    • Evolution of the genetic code
    • Davis B.K. Evolution of the genetic code. Prog. Biophys. Mol. Biol. 72:1999;157-243.
    • (1999) Prog. Biophys. Mol. Biol. , vol.72 , pp. 157-243
    • Davis, B.K.1
  • 37


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.