Transcription dependence of chromosomal gene targeting by triplex-forming oligonucleotides

Journal of Biological Chemistry

Volumn 278, Issue 5, 2003, Pages 3357-3362

  Macris, Margaret A ^a   Glazer, Peter M ^a  

^a YALE UNIVERSITY SCHOOL OF MEDICINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BIOASSAY; CROSSLINKING; DNA SEQUENCES; GENES; RNA;

TRANSCRIPTION DEPENDENCE;

BIOCHEMISTRY;

ECDYSONE; GENOMIC DNA; OLIGONUCLEOTIDE; PSORALEN; RNA POLYMERASE; TRANSCRIPTION FACTOR; DNA DIRECTED RNA POLYMERASE; PSORALEN DERIVATIVE;

ANIMAL CELL; ARTICLE; CHROMOSOME; CROSS LINKING; DNA SEQUENCE; ENZYME ACTIVITY; GENE FUNCTION; GENE LOCUS; GENE TARGETING; GENETIC TRANSCRIPTION; GENETIC TRANSFECTION; MOLECULAR RECOGNITION; NONHUMAN; PRIORITY JOURNAL; TRANSCRIPTION INITIATION; CELL LINE; CHEMISTRY; DRUG ANTAGONISM; GENETICS; HUMAN; HUMAN CHROMOSOME; METHODOLOGY; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PLASMID; RESTRICTION MAPPING;

ANIMALIA; MAMMALIA;

BASE SEQUENCE; CELL LINE; CHROMOSOMES, HUMAN; DNA-DIRECTED RNA POLYMERASES; GENE TARGETING; HUMANS; MOLECULAR SEQUENCE DATA; OLIGONUCLEOTIDES; PLASMIDS; PSORALENS; RESTRICTION MAPPING; TRANSCRIPTION, GENETIC; TRANSFECTION;

EID: 0037474217     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.M206542200     Document Type: Article

References (48)

1. Moser, H. E., and Dervan, P. B. (1987) Science 238, 645-650
2. Letai, A. G., Palladino, M. A., Fromm, E., Rizzo, V., and Fresco, J. R. (1988) Biochemistry 27, 9108-9112
3. Francois, J. C., Saison-Behmoaras, T., and Helene, C. (1988) Nucleic Acids Res. 16, 11431-11440
4. Cooney, M., Czernuszewicz, G., Postel, E. H., Flint, S. J., and Hogan, M. E. (1988) Science 241, 456-459
5. Beal, P. A., and Dervan, P. B. (1991) Science 251, 1360-1363
6. Postel, E. H., Flint, S. J., Kessler, D. J., and Hogan, M. E. (1991) Proc. Natl. Acad. Sci. U. S. A. 88, 8227-8231
7. Young, S. L., Krawczyk, S. H., Matteucci, M. D., and Toole, J. J. (1991) Proc. Natl. Acad. Sci. U. S. A. 88, 10023-10026
8. Duval-Valentin, G., Thuong, N. T., and Helene, C. (1992) Proc. Natl. Acad. Sci. U. S. A. 89, 504-508
9. Grigoriev, M., Praseuth, D., Robin, P., Hemar, A., Saison-Behmoaras, T., Dautry-Varsat, A., Thuong, N. T., Helene, C., and Harel-Bellan, A. (1992) J. Biol. Chem. 267, 3389-3395
10. Ing, N. H., Beekman, J. M., Kessler, D. J., Murphy, M., Jayaraman, K., Zendegui, J. G., Hogan, M. E., O'Malley, B. W., and Tsai, M. J. (1993) Nucleic Acids Res. 21, 2789-2796
11. Mayfield, C., Ebbinghaus, S., Gee, J., Jones, D., Rodu, B., Squibb, M., and Miller, D. (1994) J. Biol. Chem. 269, 18232-18238
12. Tu, G. C., Cao, Q. N., and Israel, Y. (1995) J. Biol. Chem. 270, 28402-28407
13. Kim, H. G., and Miller, D. M. (1998) Biochemistry 37, 2666-2672
14. Ebbinghaus, S. W., Fortinberry, H., and Gamper, H. B. (1999) Biochemistry 38, 619-628
15. Strobel, S. A., Doucette-Stamm, L. A., Riba, L., Housman, D. E., and Dervan, P. B. (1991) Science 254, 1639-1642
16. Takasugi, M., Guendouz, A., Chassignol, M., Decout, J. L., Lhomme, J., Thuong, N. T., and Helene, C. (1991) Proc. Natl. Acad. Sci. U. S. A. 88, 5602-5606
17. Giovannangeli, C., Thuong, N. T., and Helene, C. (1992) Nucleic Acids Res. 20, 4275-4281
18. Wang, G., Levy, D. D., Seidman, M. M., and Glazer, P. M. (1995) Mol. Cell. Biol. 15, 1759-1768
19. Havre, P. A., and Glazer, P. M. (1993) J. Virol. 67, 7324-7331
20. Wang, G., and Glazer, P. M. (1995) J. Biol. Chem. 270, 22595-22601
21. Wang, G., Seidman, M. M., and Glazer, P. M. (1996) Science 271, 802-805
22. Vasquez, K. M., Wang, G., Havre, P. A., and Glazer, P. M. (1999) Nucleic Acids Res. 27, 1176-1181
23. Majumdar, A., Khorlin, A., Dyatkina, N., Lin, F. L., Powell, J., Liu, J., Fei, Z., Khripine, Y., Watanabe, K. A., George, J., Glazer, P. M., and Seidman, M. M. (1998) Nat. Genet. 20, 212-214
24. Barre, F. X., Ait-Si-Ali, S., Giovannangeli, C., Luis, R., Robin, P., Pritchard, L. L., Helene, C., and Harel-Bellan, A. (2000) Proc. Natl. Acad. Sci. U. S. A. 97, 3084-3088
25. Vasquez, K. M., Narayanan, L., and Glazer, P. M. (2000) Science 290, 530-533
26. Sandor, Z., and Bredberg, A. (1995) Biochim. Biophys. Acta 1263, 235-240
27. Faruqi, A. F., Seidman, M. M., Segal, D. J., Carroll, D., and Glazer, P. M. (1996) Mol. Cell. Biol. 16, 6820-6828
28. Chan, P. P., Lin, M., Faruqi, A. F., Powell, J., Seidman, M. M., and Glazer, P. M. (1999) J. Biol. Chem. 274, 11541-11548
29. Faruqi, A. F., Datta, H. J., Carroll, D., Seidman, M. M., and Glazer, P. M. (2000) Mol. Cell. Biol. 20, 990-1000
30. Luo, Z., Macris, M. A., Faruqi, A. F., and Glazer, P. M. (2000) Proc. Natl. Acad. Sci. U. S. A. 97, 9003-9008
31. Agrawal, S., Temsamani, J., and Tang, J. Y. (1991) Proc. Natl. Acad. Sci. U. S. A. 88, 7595-7599
32. Singleton, S. F., and Dervan, P. B. (1992) Biochemistry 31, 10995-11003
33. Cheng, A. J., and Van Dyke, M. W. (1993) Nucleic Acids Res. 21, 5630-5635
34. Olivas, W. M., and Maher, L. J. (1995) Nucleic Acids Res. 23, 1936-1941
35. Vasquez, K. M., Wensel, T. G., Hogan, M. E., and Wilson, J. H. (1995) Biochemistry 34, 7243-7251
36. Westin, L., Blomquist, P., Milligan, J. F., and Wrange, O. (1995) Nucleic Acids Res. 23, 2184-2191
37. Espinas, M. L., Jimenez-Garcia, E., Martinez-Balbas, A., and Azorin, F. (1996) J. Biol. Chem. 271, 31807-31812
38. Brown, P. M., Madden, C. A., and Fox, K. R. (1998) Biochemistry 37, 16139-16151
39. Bailey, C., and Weeks, D. L. (2000) Nucleic Acids Res. 28, 1154-1161
40. Guieysse, A. L., Praseuth, D., Grigoriev, M., Harel-Bellan, A., and Helene, C. (1996) Nucleic Acids Res. 24, 4210-4216
41. Giovannangeli, C., Diviacco, S., Labrousse, V., Gryaznov, S., Charneau, P., and Helene, C. (1997) Proc. Natl. Acad. Sci. U. S. A. 94, 79-84
42. Belousov, E. S., Afonina, I. A., Kutyavin, I. V., Gall, A. A., Reed, M. W., Gamper, H. B., Wydro, R. M., and Meyer, R. B. (1998) Nucleic Acids Res. 26, 1324-1328
43. Oh, D. H., and Hanawalt, P. C. (1999) Nucleic Acids Res. 27, 4734-4742
44. Becker, N. A., and Maher, L. J. (1999) Antisense Nucleic Acid Drug Dev. 9, 313-316
45. Zendegui, J. G., Vasquez, K. M., Tinsley, J. H., Kessler, D. J., and Hogan, M. E. (1992) Nucleic Acids Res. 20, 307-314
46. Havre, P. A., Gunther, E. J., Gasparro, F. P., and Glazer, P. M. (1993) Proc. Natl. Acad. Sci. U. S. A. 90, 7879-7883
47. Gunther, E. J., Havre, P. A., Gasparro, F. P., and Glazer, P. M. (1996) Photochem. Photobiol. 63, 207-212
48. Gewirtz, A. M., Stein, C. A., and Glazer, P. M. (1996) Proc. Natl. Acad. Sci. U. S. A. 93, 3161-3163