-
1
-
-
0014398462
-
Molecular geometry and carcinogenic activity of aromatic compounds
-
Arcos J.C., Argus M.F. Molecular geometry and carcinogenic activity of aromatic compounds. New Perspect. Adv. Cancer Res. 11:1968;305-471.
-
(1968)
New Perspect. Adv. Cancer Res.
, vol.11
, pp. 305-471
-
-
Arcos, J.C.1
Argus, M.F.2
-
2
-
-
0035729093
-
Bacterial degradation of aromatic compounds via angular dioxygenation
-
Nojiri H., Habe H., Omori T. Bacterial degradation of aromatic compounds via angular dioxygenation. J. Gen. Appl. Microbiol. 47:2001;279-305.
-
(2001)
J. Gen. Appl. Microbiol.
, vol.47
, pp. 279-305
-
-
Nojiri, H.1
Habe, H.2
Omori, T.3
-
3
-
-
0000843661
-
Molecular bases of aerobic bacterial degradation of dioxins: Involvement of angular dioxygenation
-
Nojiri H., Omori T. Molecular bases of aerobic bacterial degradation of dioxins: involvement of angular dioxygenation. Biosci. Biotechnol. Biochem. 66:2002;2001-2016.
-
(2002)
Biosci. Biotechnol. Biochem.
, vol.66
, pp. 2001-2016
-
-
Nojiri, H.1
Omori, T.2
-
5
-
-
0030744612
-
Identification and characterization of genes encoding carbazole 1,9a-dioxygenase in Pseudomonas sp. strain CA10
-
Sato S., Nam J.-W., Kasuga K., Nojiri H., Yamane H., Omori T. Identification and characterization of genes encoding carbazole 1,9a-dioxygenase in Pseudomonas sp. strain CA10. J. Bacteriol. 179:1997;4850-4858.
-
(1997)
J. Bacteriol.
, vol.179
, pp. 4850-4858
-
-
Sato, S.1
Nam, J.-W.2
Kasuga, K.3
Nojiri, H.4
Yamane, H.5
Omori, T.6
-
6
-
-
0030855128
-
Cloning of genes involved in carbazole degradation of Pseudomonas sp. strain CA10: Nucleotide sequences of genes and characterization of meta-cleavage enzymes and hydrolase
-
Sato S., Ouchiyama N., Kimura T., Nojiri H., Yamane H., Omori T. Cloning of genes involved in carbazole degradation of Pseudomonas sp. strain CA10: nucleotide sequences of genes and characterization of meta-cleavage enzymes and hydrolase. J. Bacteriol. 179:1997;4841-4849.
-
(1997)
J. Bacteriol.
, vol.179
, pp. 4841-4849
-
-
Sato, S.1
Ouchiyama, N.2
Kimura, T.3
Nojiri, H.4
Yamane, H.5
Omori, T.6
-
7
-
-
0012484786
-
Purification and characterization of meta-cleavage compound hydrolase from a carbazole degrader Pseudomonas resinovorans strain CA10
-
Nojiri H., Taira H., Iwata K., Morii K., Nam J.-W., Yoshida T., Habe H., Nakamura S., Shimizu K., Yamane H., Omori T. Purification and characterization of meta-cleavage compound hydrolase from a carbazole degrader Pseudomonas resinovorans strain CA10. Biosci. Biotechnol. Biochem. 67:2003;36-45.
-
(2003)
Biosci. Biotechnol. Biochem.
, vol.67
, pp. 36-45
-
-
Nojiri, H.1
Taira, H.2
Iwata, K.3
Morii, K.4
Nam, J.-W.5
Yoshida, T.6
Habe, H.7
Nakamura, S.8
Shimizu, K.9
Yamane, H.10
Omori, T.11
-
8
-
-
0033807114
-
Identification of a serine hydrolase which cleaves the alicyclic ring of tetralin
-
Hernáez M.J., Andujar E., Riós J.L., Kaschabek S.R., Reineke W., Santero E. Identification of a serine hydrolase which cleaves the alicyclic ring of tetralin. J. Bacteriol. 182:2000;5448-5453.
-
(2000)
J. Bacteriol.
, vol.182
, pp. 5448-5453
-
-
Hernáez, M.J.1
Andujar, E.2
Riós, J.L.3
Kaschabek, S.R.4
Reineke, W.5
Santero, E.6
-
9
-
-
0035933281
-
Crystal structure of 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid (HPDA) hydrolase (BphD enzyme) from the Rhodococcus sp. strain RHA1 of the PCB degradation pathway
-
Nandhagopal N., Yamada A., Hatta T., Masai E., Fukuda M., Mitsui Y., Senda T. Crystal structure of 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid (HPDA) hydrolase (BphD enzyme) from the Rhodococcus sp. strain RHA1 of the PCB degradation pathway. J. Mol. Biol. 309:2001;1139-1151.
-
(2001)
J. Mol. Biol.
, vol.309
, pp. 1139-1151
-
-
Nandhagopal, N.1
Yamada, A.2
Hatta, T.3
Masai, E.4
Fukuda, M.5
Mitsui, Y.6
Senda, T.7
-
10
-
-
0036708001
-
Crystal structures of a meta-cleavage product hydrolase from Pseudomonas fluorescens IP01 (CumD) complexed with cleavage products
-
Fushinobu S., Saku T., Hidaka M., Jun S.-Y., Nojiri H., Yamane H., Shoun H., Omori T., Wakagi T. Crystal structures of a meta-cleavage product hydrolase from Pseudomonas fluorescens IP01 (CumD) complexed with cleavage products. Protein Sci. 11:2002;2184-2195.
-
(2002)
Protein Sci.
, vol.11
, pp. 2184-2195
-
-
Fushinobu, S.1
Saku, T.2
Hidaka, M.3
Jun, S.-Y.4
Nojiri, H.5
Yamane, H.6
Shoun, H.7
Omori, T.8
Wakagi, T.9
-
11
-
-
0027223958
-
Gene components responsible for discrete substrate specificity in the metabolism of biphenyl (bph operon) and toluene (tod operon)
-
Furukawa K., Hirose J., Suyama A., Zaiki T., Hayashida S. Gene components responsible for discrete substrate specificity in the metabolism of biphenyl (bph operon) and toluene (tod operon). J. Bacteriol. 175:1993;5224-5232.
-
(1993)
J. Bacteriol.
, vol.175
, pp. 5224-5232
-
-
Furukawa, K.1
Hirose, J.2
Suyama, A.3
Zaiki, T.4
Hayashida, S.5
-
12
-
-
0036308433
-
Purification, characterization, and steady-state kinetics of a meta-cleavage compound hydrolase from Pseudomonas fluorescens IP01
-
Saku T., Fushinobu S., Jun S.-Y., Ikeda N., Nojiri H., Yamane H., Omori T., Wakagi T. Purification, characterization, and steady-state kinetics of a meta-cleavage compound hydrolase from Pseudomonas fluorescens IP01. J. Biosci. Bioeng. 93:2002;568-574.
-
(2002)
J. Biosci. Bioeng.
, vol.93
, pp. 568-574
-
-
Saku, T.1
Fushinobu, S.2
Jun, S.-Y.3
Ikeda, N.4
Nojiri, H.5
Yamane, H.6
Omori, T.7
Wakagi, T.8
-
13
-
-
0032483324
-
Purification and preliminary characterization of a serine hydrolase involved in microbial degradation of polychlorinated biphenyls
-
Seah S.Y.K., Terracina G., Bolin J.T., Riebel P., Snieckus V., Eltis L.D. Purification and preliminary characterization of a serine hydrolase involved in microbial degradation of polychlorinated biphenyls. J. Biol. Chem. 273:1998;22943-22949.
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 22943-22949
-
-
Seah, S.Y.K.1
Terracina, G.2
Bolin, J.T.3
Riebel, P.4
Snieckus, V.5
Eltis, L.D.6
-
14
-
-
0034717267
-
Identification of a serine hydrolase as a key determinant in the microbial degradation of polychlorinated biphenyls
-
Seah S.Y.K., Labbe G., Nerdinger S., Johnson M.R., Snieckus V., Eltis L.D. Identification of a serine hydrolase as a key determinant in the microbial degradation of polychlorinated biphenyls. J. Biol. Chem. 275:2000;15701-15708.
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 15701-15708
-
-
Seah, S.Y.K.1
Labbe, G.2
Nerdinger, S.3
Johnson, M.R.4
Snieckus, V.5
Eltis, L.D.6
-
15
-
-
0035110711
-
Comparative specificities of two evolutionarily divergent hydrolases involved in microbial degradation of polychlorinated biphenyls
-
Seah S.Y.K., Labbe G., Kaschabek S.R., Reifenrath F., Reineke W., Eltis L.D. Comparative specificities of two evolutionarily divergent hydrolases involved in microbial degradation of polychlorinated biphenyls. J. Bacteriol. 183:2001;1511-1516.
-
(2001)
J. Bacteriol.
, vol.183
, pp. 1511-1516
-
-
Seah, S.Y.K.1
Labbe, G.2
Kaschabek, S.R.3
Reifenrath, F.4
Reineke, W.5
Eltis, L.D.6
-
16
-
-
85031205046
-
-
Ph.D. thesis, The University of Tokyo, Tokyo, Japan
-
J. Widada, Ph.D. thesis, The University of Tokyo, Tokyo, Japan, 2000.
-
(2000)
-
-
Widada, J.1
-
17
-
-
0003903343
-
-
Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press
-
Sambrook J., Fritsch E.F., Maniatis T. Molecular Cloning, second ed: A Laboratory Manual. 1989;Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
-
(1989)
Molecular Cloning, Second Ed: A Laboratory Manual
-
-
Sambrook, J.1
Fritsch, E.F.2
Maniatis, T.3
-
18
-
-
0034981075
-
Genetic characterization and evolutionary implications of a car gene cluster in the carbazole degrader Pseudomonas sp. strain CA10
-
Nojiri H., Sekiguchi H., Maeda K., Urata M., Nakai S., Yoshida T., Habe H., Omori T. Genetic characterization and evolutionary implications of a car gene cluster in the carbazole degrader Pseudomonas sp. strain CA10. J. Bacteriol. 183:2001;3663-3679.
-
(2001)
J. Bacteriol.
, vol.183
, pp. 3663-3679
-
-
Nojiri, H.1
Sekiguchi, H.2
Maeda, K.3
Urata, M.4
Nakai, S.5
Yoshida, T.6
Habe, H.7
Omori, T.8
-
19
-
-
0020971311
-
A rapid alkaline extraction for the isolation of plasmid DNA
-
Birnboim H.C. A rapid alkaline extraction for the isolation of plasmid DNA. Methods Enzymol. 100:1983;243-255.
-
(1983)
Methods Enzymol.
, vol.100
, pp. 243-255
-
-
Birnboim, H.C.1
-
20
-
-
0020959710
-
Studies on transformation of Escherichia coli with plasmids
-
Hanahan D. Studies on transformation of Escherichia coli with plasmids. J. Mol. Biol. 166:1983;557-580.
-
(1983)
J. Mol. Biol.
, vol.166
, pp. 557-580
-
-
Hanahan, D.1
-
21
-
-
0014949207
-
Cleavage of structural proteins during the assembly of the head of bacteriophage T4
-
Laemmli U.K. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature (London). 227:1970;680-685.
-
(1970)
Nature (London)
, vol.227
, pp. 680-685
-
-
Laemmli, U.K.1
-
22
-
-
0000560808
-
MOLREP: An automated program for molecular replacement
-
Vagin A., Teplyakov A. MOLREP: an automated program for molecular replacement. J. Appl. Cryst. 30:1997;1022-1025.
-
(1997)
J. Appl. Cryst.
, vol.30
, pp. 1022-1025
-
-
Vagin, A.1
Teplyakov, A.2
-
23
-
-
3543012707
-
Crystallography and NMR system: A new software suite for macromolecular structure determination
-
Brunger A.T., Adams P.D., Clore G.M., DeLano W.L., Gros P., Grosse-Kunstleve R.W., Jiang J.S., Kuszewski J., Nilges M., Pannu N.S., Read R.J., Rice L.M., Simonson T., Warren G.L. Crystallography and NMR system: a new software suite for macromolecular structure determination. Acta Crystallogr. D. 54:1998;905-921.
-
(1998)
Acta Crystallogr. D
, vol.54
, pp. 905-921
-
-
Brunger, A.T.1
Adams, P.D.2
Clore, G.M.3
DeLano, W.L.4
Gros, P.5
Grosse-Kunstleve, R.W.6
Jiang, J.S.7
Kuszewski, J.8
Nilges, M.9
Pannu, N.S.10
Read, R.J.11
Rice, L.M.12
Simonson, T.13
Warren, G.L.14
-
24
-
-
84889120137
-
Improved methods for building protein models in electron density maps and the location of errors in these models
-
Jones T.A., Zou J.-Y., Cowan S.W., Kjeldgaard M. Improved methods for building protein models in electron density maps and the location of errors in these models. Acta Crystallogr. A. 47:1991;110-119.
-
(1991)
Acta Crystallogr. A
, vol.47
, pp. 110-119
-
-
Jones, T.A.1
Zou, J.-Y.2
Cowan, S.W.3
Kjeldgaard, M.4
-
25
-
-
0032790081
-
XtalView/Xfit - A versatile program for manipulating atomic coordinates and electron density
-
McRee D.E. XtalView/Xfit - A versatile program for manipulating atomic coordinates and electron density. J. Struct. Biol. 125:1999;156-165.
-
(1999)
J. Struct. Biol.
, vol.125
, pp. 156-165
-
-
McRee, D.E.1
-
27
-
-
0028922586
-
LIGPLOT: A program to generate schematic diagrams of protein-ligand interactions
-
Wallace A.C., Lakowski R.A., Thornton J.M. LIGPLOT: A program to generate schematic diagrams of protein-ligand interactions. Protein Eng. 8:1995;127-134.
-
(1995)
Protein Eng.
, vol.8
, pp. 127-134
-
-
Wallace, A.C.1
Lakowski, R.A.2
Thornton, J.M.3
-
28
-
-
0026244229
-
MOLSCRIPT: A program to produce both detailed and schematic plots of protein structures
-
Kraulis P.J. MOLSCRIPT: A program to produce both detailed and schematic plots of protein structures. J. Appl. Crystallogr. 24:1991;946-950.
-
(1991)
J. Appl. Crystallogr.
, vol.24
, pp. 946-950
-
-
Kraulis, P.J.1
-
29
-
-
0030815133
-
Raster3D: Photorealistic molecular graphics
-
Merritt E.A., Bacon D.J. Raster3D: Photorealistic molecular graphics. Methods Enzymol. 277:1997;505-524.
-
(1997)
Methods Enzymol.
, vol.277
, pp. 505-524
-
-
Merritt, E.A.1
Bacon, D.J.2
-
30
-
-
0034284122
-
Recent changes to RasMol, recombining the variants
-
Bernstein H.J. Recent changes to RasMol, recombining the variants. Trends Biochem. Sci. 25:2000;453-455.
-
(2000)
Trends Biochem. Sci.
, vol.25
, pp. 453-455
-
-
Bernstein, H.J.1
-
32
-
-
0026540411
-
The α/β hydrolase fold
-
Ollis D.L., Cheah E., Cygler M., Dijkstra B., Frolow F., Franken S.M., Harel M., Remington S.J., Silman I., Schrag J. The. α/β hydrolase fold Protein Eng. 5:1992;197-211.
-
(1992)
Protein Eng.
, vol.5
, pp. 197-211
-
-
Ollis, D.L.1
Cheah, E.2
Cygler, M.3
Dijkstra, B.4
Frolow, F.5
Franken, S.M.6
Harel, M.7
Remington, S.J.8
Silman, I.9
Schrag, J.10
-
34
-
-
0027968068
-
CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice
-
Thompson J.D., Higgins D.G., Gibson T.J. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22:1994;4673-4680.
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
|