Electrochemical and NMR spectroscopic studies of distal pocket mutants of nitrophorin 2: Stability, structure, and dynamics of axial ligand complexes

Proceedings of the National Academy of Sciences of the United States of America

Volumn 100, Issue 7, 2003, Pages 3778-3783

  Shokhireva, Tatjana Kh ^a   Berry, Robert E ^a   Uno, Elizabeth ^a   Balfour, Celia A ^a   Zhang, Hongjun ^a   Walker, F Ann ^a  

^a University of Arizona   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

HYDROGEN; IRON; LEUCINE; LIGAND; MUTANT PROTEIN; NITRIC OXIDE; NITROPHORIN 2; PROTEIN; PROTEIN WT; UNCLASSIFIED DRUG; VALINE; CARRIER PROTEIN; HEMOPROTEIN; ISOPROTEIN; NITROPHORIN; RECOMBINANT PROTEIN; SALIVA PROTEIN;

ARTICLE; CONCENTRATION (PARAMETERS); DISSOCIATION; DYNAMICS; ELECTROCHEMISTRY; HYPOTHESIS; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; NUCLEAR OVERHAUSER EFFECT; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN STABILITY; PROTEIN STRUCTURE; REDUCTION; AMINO ACID SUBSTITUTION; CHEMISTRY; DRUG STABILITY; ESCHERICHIA COLI; GENETICS; METHODOLOGY; MOLECULAR CLONING; OXIDATION REDUCTION REACTION; SITE DIRECTED MUTAGENESIS;

AMINO ACID SUBSTITUTION; CARRIER PROTEINS; CLONING, MOLECULAR; DRUG STABILITY; ELECTROCHEMISTRY; ESCHERICHIA COLI; HEMEPROTEINS; LIGANDS; MAGNETIC RESONANCE SPECTROSCOPY; MUTAGENESIS, SITE-DIRECTED; OXIDATION-REDUCTION; PROTEIN ISOFORMS; RECOMBINANT PROTEINS; SALIVARY PROTEINS;

EID: 0037389596     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.0536641100     Document Type: Article

References (50)

1. Walker, F. A. & Montfort, W. R. (2001) in Advances in Inorganic Chemistry, eds. Mauk, A. G. & Sykes, A. G. (Academic, San Diego), Vol. 51, pp. 295-358.
2. Moreira, M. F., Coelho, H. S. L., Zingali, R. B., Oliveira, P. L. & Masuda, H. (2003) Insect Biochem. Mol. Biol. 33, 23-28.
3. Ribeiro, J. M. C. & Nussenzveig, R. H. (1993) FEBS Lett. 330, 165-168.
4. Nussenzveig, R. H., Bentley, D. L. & Ribeiro, J. M. C. (1995) J. Exp. Biol. 198, 1093-1098.
5. Yuda, M., Hirai, M., Miura, K., Matsumura, H., Ando, K. & Chinzei, Y. (1996) Eur. J. Biochem. 242, 807-812.
6. Ribeiro, J. M. C., Hazzard, J. M. H., Nussenzveig, R., Champagne, D. & Walker, F. A. (1993) Science 260, 539-541.
7. Ribeiro, J. M. C. & Walker, F. A. (1994) J. Exp. Med. 180, 2251-2257.
8. Neva, F. A. (1988) in Cecil Textbook of Medicine, eds. Wyngaarden. J. B. & Smith, L. H. (Saunders, Philadelphia), 18th Ed., pp. 1865-1869.
9. Kirchhoff, L. V. (1991) in Harrison's Principles of Internal Medicine, eds. Wilson, J. D., Braunwald, E., Isselbacher, K. J., Petersdorf, R. G., Martin, J. B., Fauci, A. S. & Root, R. K. (McGraw-Hill, New York), 12th Ed., pp. 791-793.
10. Kirchhoff, L. V. (1993) N. Engl. J. Med. 329, 639-644.
11. Maes, E. M., Walker, F. A., Montfort, W. R. & Czernuszewicz, R. S. (2001) J. Am. Chem. Soc. 123, 11664-11672.
12. Ding, X. D., Weichsel, A., Andersen, J. F., Shokhireva, T. K., Balfour, C., Pierik, A. J., Averill, B. A., Montfort, W. R. & Walker, F. A. (1999) J. Am. Chem. Soc. 121, 128-138.
13. Andersen, J. F., Ding, X. D., Balfour, C., Champagne, D. E., Walker, F. A. & Montfort, W. R. (2000) Biochemistry 39, 10118-10131.
14. Andersen, J. F., Champagne, D. E., Weichsel, A., Ribeiro, J. M. C., Balfour, C. A., Dress, V. & Montfort, W. R. (1997) Biochemistry 36, 4423-4428.
15. Weichsel, A., Andersen, J. F., Champagne, D. E., Walker, F. A. & Montfort, W. R. (1997) Nat. Struct. Biol. 5, 304-309.
16. Andersen, J. F. & Montfort, W. R. (2000) J. Biol. Chem. 275, 30496-30503.
17. Andersen, J. F., Weichsel, A., Balfour, C. A., Champagne, D. E. & Montfort, W. R. (1998) Structure (London) 6, 1315-1327.
18. Weichsel, A., Andersen, J. F., Roberts, S. A. & Montfort, W. R. (2000) Nat. Struct. Biol. 7, 551-554.
19. Roberts, S. A., Weichsel, A., Qiu, Y., Shelnutt, J. A., Walker, F. A. & Montfort, W. R. (2001) Biochemistry 40, 11327-11337.
20. Montfort, W. R., Weichsel, A. & Andersen, J. F. (2000) Biochim. Biophys. Acta 1482, 110-118.
21. Walker, F. A. (1999) Coord. Chem. Rev. 185-186, 471-534.
22. Ribeiro, J. M. C., Schneider, M. & Guimaraes, J. A. (1995) Biochem. J. 308, 243-249.
23. Zhang, Y., Ribeiro, J. M. C., Guimaraes, J. A. & Walsh, P. N. (1998) Biochemistry 37, 10681-10690.
24. Hoshino, M., Maeda, M., Konishi, R., Seki, H. & Ford, P. C. (1996) J. Am. Chem. Soc. 118, 5702-5707.
25. Varadarajan, R., Zewert, T. E., Gray, H. B. & Boxer, S. G. (1989) Science 243, 69-72.
26. Safo, M. K., Nesset, M. J. M., Walker, F. A., Debrunner, P. G. & Scheidt, W. R. (1997) J. Am. Chem. Soc. 119, 9438-9448.
27. Nessett, M. J. M., Shokhirev, N. V., Enemark, P. D., Jacobson, S. E. & Walker, F. A. (1996) Inorg. Chem. 35, 5188-5200.
28. Polam, J. R., Shokhireva, T. Kh., Raffii, K., Simonis, U. & Walker, F. A. (1997) Inorg. Chim. Acta 263, 109-117.
29. Bertini, I., Luchinat, C., Macinai, R., Martinuzzi, S., Pierattelli, R. & Viezzoli, R. S. (1998) Inorg. Chim. Acta 269, 125-134.
30. Ernst, R. R., Bodenhausen, G. & Wokaun, A. (1992) Principles of Nuclear Magnetic Resonance in One and Two Dimensions (Clarendon, Oxford, U.K.).
31. Churg, A. K. & Warshel, A. (1986) Biochemistry 25, 1675-1681.
32. Gunner, M. R. & Honig, B. (1991) Proc. Natl. Acad. Sci. USA 88, 9151-9155.
33. Tezcan, F. A., Winkler, J. R. & Gray, H. B. (1998) J. Am. Chem. Soc. 120, 13383-13388.
34. Shokhireva, T. Kh., Shokhirev, N. V. & Walker, F. A. (2003) Biochemistry 42, 679-693.
35. Walker, F. A. (2000) in The Porphyrin Handbook, eds. Kadish, K. M., Smith, K. M. & Guilard, R. (Academic, San Diego), Vol. 5, pp. 81-183.
36. La Mar, G. N., Satterlee, J. D. & De Ropp, J. S. (2000) in The Porphyrin Handbook, eds. Kadish, K. M., Smith, K. M. & Guilard, R. (Academic, San Diego), Vol. 5, pp. 185-298.
37. Shokhirev, N. V. & Walker, F. A. (1998) J. Biol. Inorg. Chem. 3, 581-594.
38. Bertini, I., Luchinat, C., Parigi, G. & Walker, F. A. (1999) J. Biol. Inorg. Chem. 4, 515-519, and correction (1999) 4, 846.
39. Walker, F. A., Emrick, D., Rivera, J. E., Hanquet, B. J. & Buttlaire, D. H. (1988) J. Am. Chem. Soc. 110, 6234-6240.
40. La Mar, G. N., Smith, K. M., Gersonde, K., Sick, H. & Overkamp, M. (1980) J. Biol. Chem. 255, 66-70.
41. La Mar, G. N., de Ropp, J. S., Smith, K. M. & Langry, K. C. (1981) J. Biol. Chem. 256, 237-243.
42. La Mar, G. N., Davis, N. L., Parish, D. W. & Smith, K. M. (1983) J. Mol. Biol. 168, 887-896.
43. La Mar, G. N., Satterlee, J. D. & De Ropp, J. S. (2000) in The Porphyrin Handbook, eds. Kadish, K. M., Smith, K. M. & Guilard, R. (Academic, San Diego), Vol. 5, pp. 218-220.
44. De Ropp, J. S. & La Mar, G. N. (1991) J. Am. Chem. Soc. 113, 4348-4350.
45. De Ropp, J. S., Mandal, P., Brauer, S. L. & La Mar, G. N. (1997) J. Am. Chem. Soc. 119, 4732-4739.
46. La Mar, G. N., Jackson, J. T., Dugad, L. B., Cusanovich, M. A. & Bartsch, R. G. (1990) J. Biol. Chem. 265, 16173-161780.
47. Bertini, I., Gori, G., Luchinat, C. & Vila, A. J. (1993) Biochemistry 32, 776-783.
48. Clark, K., Dugad, L. B., Bartsch, R. G., Cusanovich, M. A. & La Mar, G. N. (1996) J. Am. Chem. Soc. 118, 4654-4664.
49. Walker, F. A., Huynh, B. H., Scheidt, W. R. & Osvath, S. R. (1986) J. Am. Chem. Soc. 108, 5288-5297.
50. Ogura, H., Yatsunyk, L., Medforth, C. J., Smith, K. M., Barkigia, K. M., Renner, M. W., Melamed, D. & Walker, F. A. (2001)J. Am. Chem. Soc. 123, 6564-6578.