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Volumn 14, Issue 2, 2003, Pages 95-101

Complete sequence of the 10.3 kb silkworm Attacus ricini rDNA repeat, determination of the transcriptional initiation site and functional analysis of the intergenic spacer

Author keywords

Attacus ricini; Intergenic spacer; RRNA genes; Silkworm; Transcription initiation site

Indexed keywords

DNA DIRECTED RNA POLYMERASE; REPETITIVE DNA; RIBOSOME DNA; RIBOSOME RNA; SPACER DNA;

EID: 0037381840     PISSN: 10425179     EISSN: None     Source Type: Journal    
DOI: 10.1080/1042517031000072089     Document Type: Article
Times cited : (10)

References (29)
  • 1
    • 0023056619 scopus 로고
    • Processing in the external transcribed spacer of ribosomal RNA from Physarum polycephalum
    • Blum, B., Pierron, G., Seebeck, T. and Braun, R. (1986) "Processing in the external transcribed spacer of ribosomal RNA from Physarum polycephalum", Nucleic Acids Res. 14, 3153-3166.
    • (1986) Nucleic Acids Res. , vol.14 , pp. 3153-3166
    • Blum, B.1    Pierron, G.2    Seebeck, T.3    Braun, R.4
  • 2
    • 0023651658 scopus 로고
    • Tsetse fly rDNA: An analysis of structure and sequence
    • Cross, N.C. and Dover, G.A. (1987) "Tsetse fly rDNA: an analysis of structure and sequence", Nucleic Acids Res. 15, 15-30.
    • (1987) Nucleic Acids Res. , vol.15 , pp. 15-30
    • Cross, N.C.1    Dover, G.A.2
  • 3
    • 0012717215 scopus 로고
    • Structural characteristics of 5.8S rRNA gene in the silkworm Attacus ricini
    • Dou, W., Zheng, Z. and Li, Z. (1987) "Structural characteristics of 5.8S rRNA gene in the silkworm Attacus ricini", Acta Biochim. Biophys. Sin. 19, 373-381.
    • (1987) Acta Biochim. Biophys. Sin. , vol.19 , pp. 373-381
    • Dou, W.1    Zheng, Z.2    Li, Z.3
  • 4
    • 0023650530 scopus 로고
    • Structure of the Bombyx mori rDNA: Initiation site for its transcription
    • Fujiwara, H. and Ishikawa, H. (1987) "Structure of the Bombyx mori rDNA: initiation site for its transcription", Nucleic Acids Res. 15, 1245-1258.
    • (1987) Nucleic Acids Res. , vol.15 , pp. 1245-1258
    • Fujiwara, H.1    Ishikawa, H.2
  • 5
    • 0012645235 scopus 로고
    • Part of external transcribed spacer (ETS) sequence of the silkworm Attacus ricini rDNA
    • Gan, R., Wang, H., Chu, M., Xu, M. and Li, Z. (1983) "Part of external transcribed spacer (ETS) sequence of the silkworm Attacus ricini rDNA", Yi Chuan Xue Bao 10, 247-253.
    • (1983) Yi Chuan Xue Bao , vol.10 , pp. 247-253
    • Gan, R.1    Wang, H.2    Chu, M.3    Xu, M.4    Li, Z.5
  • 6
    • 0030664072 scopus 로고    scopus 로고
    • The fundamental ribosomal RNA transcription initiation factor-IB (TIF-IB, SL1, factor D) binds to the rRNA core promoter primarily by minor groove contacts
    • Geiss, G.K., Radebaugh, C.A. and Paule, M.R. (1997) "The fundamental ribosomal RNA transcription initiation factor-IB (TIF-IB, SL1, factor D) binds to the rRNA core promoter primarily by minor groove contacts", J. Biol. Chem. 272, 29243-29254.
    • (1997) J. Biol. Chem. , vol.272 , pp. 29243-29254
    • Geiss, G.K.1    Radebaugh, C.A.2    Paule, M.R.3
  • 7
    • 0029067907 scopus 로고
    • Complete sequence of the 43-kb human ribosomal DNA repeat: Analysis of the intergenic spacer
    • Gonzalez, I.L. and Sylvester, J.E. (1995) "Complete sequence of the 43-kb human ribosomal DNA repeat: analysis of the intergenic spacer", Genomics 27, 320-328.
    • (1995) Genomics , vol.27 , pp. 320-328
    • Gonzalez, I.L.1    Sylvester, J.E.2
  • 8
    • 0020024956 scopus 로고
    • Ribosomal RNA transcription in vitro is species-specific
    • Grummt, I., Roth, E. and Paule, M.R. (1982) "Ribosomal RNA transcription in vitro is species-specific", Nature 296, 173-174.
    • (1982) Nature , vol.296 , pp. 173-174
    • Grummt, I.1    Roth, E.2    Paule, M.R.3
  • 9
    • 0028014334 scopus 로고
    • A transfected human ribosomal RNA gene is present in the nucleolus of human cells
    • Hadjiargyrou, M., McDowell, K.A. and Henderson, A.S. (1994) "A transfected human ribosomal RNA gene is present in the nucleolus of human cells", Cytogenet. Cell. Genet. 66, 58-62.
    • (1994) Cytogenet. Cell. Genet. , vol.66 , pp. 58-62
    • Hadjiargyrou, M.1    McDowell, K.A.2    Henderson, A.S.3
  • 10
    • 0012708199 scopus 로고    scopus 로고
    • Characterization of S1 nuclease sensitive site at transcription initiation region of Attacus ricini rDNA
    • He, M., Zhao, M., Jin, J. and Li, Z. (1997) "Characterization of S1 nuclease sensitive site at transcription initiation region of Attacus ricini rDNA", Sci. China (Ser. C) 40, 398-405.
    • (1997) Sci. China (Ser. C) , vol.40 , pp. 398-405
    • He, M.1    Zhao, M.2    Jin, J.3    Li, Z.4
  • 11
    • 0024300366 scopus 로고
    • The S1-sensitive form of d(C-T)n. d(A-G)n: Chemical evidence for a three-stranded structure in plasmids
    • Johnston, B.H. (1988) "The S1-sensitive form of d(C-T)n. d(A-G)n: chemical evidence for a three-stranded structure in plasmids", Science 241, 1800-1804.
    • (1988) Science , vol.241 , pp. 1800-1804
    • Johnston, B.H.1
  • 12
    • 0022133407 scopus 로고
    • Chemical probes of DNA conformation: Detection of Z-DNA at nucleotide resolution
    • Johnston, B.H. and Rich, A. (1985) "Chemical probes of DNA conformation: detection of Z-DNA at nucleotide resolution", Cell 42, 713-724.
    • (1985) Cell , vol.42 , pp. 713-724
    • Johnston, B.H.1    Rich, A.2
  • 13
    • 0021750302 scopus 로고
    • Cis-acting, recombination-stimulating activity in a fragment of the ribosomal DNA of S. cerevisiae
    • Keil, R.L. and Roeder, G.S. (1984) "Cis-acting, recombination-stimulating activity in a fragment of the ribosomal DNA of S. cerevisiae", Cell 39(2 Pt 1), 377-386.
    • (1984) Cell , vol.39 , Issue.2 PART 1 , pp. 377-386
    • Keil, R.L.1    Roeder, G.S.2
  • 14
    • 0024812559 scopus 로고
    • The features of the 3′ terminal sequences of the 18S rRNA gene from silkworm Attacus ricini
    • Ling, M.H., Zheng, Z.C., Cao, P. and Li, Z.P. (1989) "The features of the 3′ terminal sequences of the 18S rRNA gene from silkworm Attacus ricini", Yi Chuan Xue Bao 16, 442-447.
    • (1989) Yi Chuan Xue Bao , vol.16 , pp. 442-447
    • Ling, M.H.1    Zheng, Z.C.2    Cao, P.3    Li, Z.P.4
  • 15
    • 0027486027 scopus 로고
    • Initiation and termination of DNA replication in human rRNA genes
    • Little, R.D., Platt, T.H. and Schildkraut, C.L. (1993) "Initiation and termination of DNA replication in human rRNA genes", Mol. Cell Biol. 13, 6600-6613.
    • (1993) Mol. Cell Biol. , vol.13 , pp. 6600-6613
    • Little, R.D.1    Platt, T.H.2    Schildkraut, C.L.3
  • 16
    • 0018814593 scopus 로고
    • Repeated genes in eukaryotes
    • Long, E.O. and Dawid, I.B. (1980) "Repeated genes in eukaryotes", Annu. Rev. Biochem. 49, 727-764.
    • (1980) Annu. Rev. Biochem. , vol.49 , pp. 727-764
    • Long, E.O.1    Dawid, I.B.2
  • 17
    • 0029900290 scopus 로고    scopus 로고
    • Common DNA structural features exhibited by eukaryotic ribosomal gene promoters
    • Marilley, M. and Pasero, P. (1996) "Common DNA structural features exhibited by eukaryotic ribosomal gene promoters", Nucleic Acids Res. 24, 2204-2211.
    • (1996) Nucleic Acids Res. , vol.24 , pp. 2204-2211
    • Marilley, M.1    Pasero, P.2
  • 18
    • 0029170117 scopus 로고
    • Promotion and regulation of ribosomal transcription in eukaryotes by RNA polymerase I
    • Moss, T. and Stefanovsky, V.Y. (1994) "Promotion and regulation of ribosomal transcription in eukaryotes by RNA polymerase I", Prog. Nucleic Acids Res. Mol. Biol. 50, 25-66.
    • (1994) Prog. Nucleic Acids Res. Mol. Biol. , vol.50 , pp. 25-66
    • Moss, T.1    Stefanovsky, V.Y.2
  • 19
    • 0034148009 scopus 로고    scopus 로고
    • The complete DNA sequence of the nuclear ribosomal RNA gene complex of Verticillium dahliae: Intraspecific heterogeneity within the intergenic spacer region
    • Pramateftaki, P.V., Antoniou, P.P. and Typas, M.A. (2000) "The complete DNA sequence of the nuclear ribosomal RNA gene complex of Verticillium dahliae: intraspecific heterogeneity within the intergenic spacer region", Fungal Genet. Biol. 29, 19-27.
    • (2000) Fungal Genet. Biol. , vol.29 , pp. 19-27
    • Pramateftaki, P.V.1    Antoniou, P.P.2    Typas, M.A.3
  • 20
    • 0021265134 scopus 로고
    • RNA polymerase I promoters and transcription factors
    • Sommerville, J. (1984) "RNA polymerase I promoters and transcription factors", Nature 310, 189-190.
    • (1984) Nature , vol.310 , pp. 189-190
    • Sommerville, J.1
  • 21
    • 0024043089 scopus 로고
    • Complete sequences of the rRNA genes of Drosophila melanogaster
    • Tautz, D., Hancock, J.M., Webb, D.A., Tautz, C. and Dover, G.A. (1988) "Complete sequences of the rRNA genes of Drosophila melanogaster", Mol. Biol. Evol. 5, 366-376.
    • (1988) Mol. Biol. Evol. , vol.5 , pp. 366-376
    • Tautz, D.1    Hancock, J.M.2    Webb, D.A.3    Tautz, C.4    Dover, G.A.5
  • 22
    • 0022432227 scopus 로고
    • Structure of a Neurospora. RNA polymerase I promoter defined by transcription in vitro with homologous extracts
    • Tyler, B.M. and Giles, N.H. (1985) "Structure of a Neurospora. RNA polymerase I promoter defined by transcription in vitro with homologous extracts", Nucleic Acids Res. 13, 4311-4332.
    • (1985) Nucleic Acids Res. , vol.13 , pp. 4311-4332
    • Tyler, B.M.1    Giles, N.H.2
  • 23
    • 0017575046 scopus 로고
    • The structural organization of ribosomal DNA in Drosophila melanogaster
    • Wellauer, P.K. and Dawid, I.B. (1977) "The structural organization of ribosomal DNA in Drosophila melanogaster", Cell 10, 193-212.
    • (1977) Cell , vol.10 , pp. 193-212
    • Wellauer, P.K.1    Dawid, I.B.2
  • 24
    • 0012640034 scopus 로고
    • Cloning of the ribosomal RNA gene of silkworm Attucus ricini in Escherichia coli
    • Wu, Z. (1983) "Cloning of the ribosomal RNA gene of silkworm Attucus ricini in Escherichia coli", Yi Chuan Xue Bao 10, 423-428.
    • (1983) Yi Chuan Xue Bao , vol.10 , pp. 423-428
    • Wu, Z.1
  • 25
    • 0021330595 scopus 로고
    • Determination of the promoter region of mouse ribosomal RNA gene by an in vitro transcription system
    • Yamamoto, O., Takakusa, N., Mishima, Y., Kominami, R. and Muramatsu, M. (1984) Determination of the promoter region of mouse ribosomal RNA gene by an in vitro transcription system', Proc. Natl Acad. Sci. USA 81, 299-303.
    • (1984) Proc. Natl. Acad. Sci. USA , vol.81 , pp. 299-303
    • Yamamoto, O.1    Takakusa, N.2    Mishima, Y.3    Kominami, R.4    Muramatsu, M.5
  • 26
    • 0032531751 scopus 로고    scopus 로고
    • Conserved cis-and trans-acting determinants for replication initiation and regulation of replication fork movement in tetrahymenid species
    • Yue, M., Reischmann, K.P. and Kapler, G.M. (1998) Conserved cis-and trans-acting determinants for replication initiation and regulation of replication fork movement in tetrahymenid species, Nucleic Acids Res. 26, 4635-4644.
    • (1998) Nucleic Acids Res , vol.26 , pp. 4635-4644
    • Yue, M.1    Reischmann, K.P.2    Kapler, G.M.3
  • 27
    • 0012640311 scopus 로고
    • The restriction map of ribosomal RNA Gene in silkworm Attacus ricini
    • Zheng, Z., Qian, X., Chu, M., Zhang, A. and Li, Z. (1981) "The restriction map of ribosomal RNA Gene in silkworm Attacus ricini", Yi Chuan Xue Bao 8, 203-211.
    • (1981) Yi Chuan Xue Bao , vol.8 , pp. 203-211
    • Zheng, Z.1    Qian, X.2    Chu, M.3    Zhang, A.4    Li, Z.5
  • 28
    • 0012685907 scopus 로고
    • Localization of 18S, 28S and 5.8S ribosomal RNA genes on the ribosomal RNA genes of silkworm Attacus ricini
    • Zheng, Z., Qian, X., Yang, G., Zhong, A. and Li, Z. (1983) "Localization of 18S, 28S and 5.8S ribosomal RNA genes on the ribosomal RNA genes of silkworm Attacus ricini", Yi Chuan Xue Bao 10, 333-340.
    • (1983) Yi Chuan Xue Bao , vol.10 , pp. 333-340
    • Zheng, Z.1    Qian, X.2    Yang, G.3    Zhong, A.4    Li, Z.5
  • 29
    • 0000082684 scopus 로고    scopus 로고
    • Identification and characterization of scaffold-associated region (SAR) of rRNA gene of silkworm Attacus ricini
    • Zhao, M., Li, B., Zhao, H., He, M. and Li, Z. (1998) "Identification and characterization of scaffold-associated region (SAR) of rRNA gene of silkworm Attacus ricini", Sci. China (Ser. C) 41, 181-188.
    • (1998) Sci. China (Ser. C) , vol.41 , pp. 181-188
    • Zhao, M.1    Li, B.2    Zhao, H.3    He, M.4    Li, Z.5


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