Sex-specific mutation rates in salmonid fish

Journal of Molecular Evolution

Volumn 56, Issue 4, 2003, Pages 458-463

  Ellegren, Hans ^a   Fridolfsson, Anna Karin ^a  

^a UPPSALA UNIVERSITY   (Sweden)

Author keywords

Germline; Mutation rate; Oncorhynchus; Sex bias; Y chromosome

Indexed keywords

DNA; GROWTH HORMONE;

AMINO ACID SEQUENCE; ANIMAL TISSUE; ARTICLE; CELL DIVISION; COMPARATIVE STUDY; CONTROLLED STUDY; DNA REPLICATION; EVOLUTION; FEMALE; GERM LINE; INTRON; MALE; MUTATION RATE; NONHUMAN; NUCLEOTIDE SEQUENCE; ONCORHYNCHUS; POLYMERASE CHAIN REACTION; SALMON; SEX DIFFERENCE; Y CHROMOSOME;

ANIMALS; BASE SEQUENCE; FEMALE; MALE; MOLECULAR SEQUENCE DATA; MUTATION; PHYLOGENY; SALMON; SEQUENCE HOMOLOGY, NUCLEIC ACID; SEX FACTORS;

ANIMALIA; AVES; MAMMALIA; ONCORHYNCHUS; SALMONIDAE; VERTEBRATA;

EID: 0037381765     PISSN: 00222844     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00239-002-2416-z     Document Type: Article

References (32)

1. Bauer VL, Aquardo CF (1997) Rates of sequence evolution are not sex-biased in Drosophila melanogaster and D. simulans. Mol Biol Evol 14:1252-1257
2. Bohossian HB, Skaletsky H, Page DC (2000) Unexpectedly similar rates of nucleotide substitution found in male and female hominids. Nature 406:622-625
3. Carmichael AN, Fridolfsson AK, Ellegren H (2000) Male-biased mutation rates revealed from Z- and W-chromosome linked ATP synthase alpha-subunit (ATP5A1) sequences in birds. J Mol Evol 50:443-447
4. Charlesworth B (1996) The evolution of chromosomal sex determination and dosage compensation. Curr Biol 6:149-162
5. Devlin RH, Biagi CA, Smailus DE (2001) Genetic mapping of Y-chromosomal DNA markers in Pacific salmon. Genetica 111:43-58
6. Du SJ, Devlin RH, Hew CL (1993) Genomic structure of growth hormone genes in chinook salmon (Oncorhynchus tshawytscha): presence of two functional genes, GH-I and GH-II, and a male-specific pseudigene, GH-ψ. DNA Cell Biol 12:739-751
7. Ellegren H, Fridolfsson AK (1997) Male-driven evolution of DNA sequences in birds. Nat Genet 17:182-184
8. Ellegren H (2000) Heterogeneous mutation processes in human microsatellite DNA sequences. Nat Genet 24:400-402
9. Eyre-Walker A, Hurst LD (2001) The evolution of isochores. Nat Rev Genet 2:549-555
10. Forbes SH, Knudsen KL, North TW, Allendorf FW (1994) One of two growth hormone genes in O. kisutch salmon is sex-linked. Proc Natl Acad Sci USA 91:1628-1631
11. Frazer KA, Sheehan JB, Stokowski RP, Chen XY, Hosseini R, Cheng JF, et al. (2001) Evolutionarily conserved sequences on human chromosome 21. Genome Res 11:1651-1659
12. Haldane JBS (1947) The rate of mutation of the gene for hemophilia and its segregation in males and females. Ann Eugen 13:262-271
13. Hardison RC (2000) Conserved noncoding sequence are reliable guides to regulatory elements. Trends Genet 16:369-372
14. Hartley SE (1987) The chromosomes of salmonid fishes. Biol Rev Cambridge Philos Soc 62:197-214
15. Huang W, Chang BHJ, Gu X, Hewett-Emmett D, Li WH (1997) Sex differences in mutation rate in higher primates estimated from AMG intron sequences. J Mol Evol 44:463-465
16. Johansen B, Johnsen OC, Valla S (1989) The complete nucleotide sequence of the growth-hormone gene from Atlantic salmon (Salmo salar). Gene 77:317-324
17. Kahn NW, Quinn TW (1999) Male-driven evolution among Eoaves? A test of the replicative division hypothesis in a heterogametic female (ZW) system. J Mol Evol 49:750-759
18. Kumar S, Tamura K, Jakobsen IB, Nei M (2001) MEGA2: molecular evolutionary genetics analysis software. Bioinformatics 17:1244-1245
19. Lahn BT, Page DC (1999) Four evolutionary strata on the human X chromosome. Science 286:964-967
20. Lebrun C, Billard R, Jalabert B (1982) Changes in the number of germ cells in the gonads of the rainbow trout (Salmo gairdnerii) during the first 10 post-hatching weeks. Reprod Nutr Dev 22:405-412
21. Makova KD, Li WH (2002) Strong male-driven evolution in human and apes. Nature 416:624-626
22. McVean GT, Hurst LD (1997) Evidence for a selectively favourable reduction in the mutation rate of the X chromosome. Nature 386:388-391
23. Miyata T, Hayashida H, Kuma K, Mitsuyasu K, Yasunag T (1987) Male-driven molecular evolution: a model and a nucleotide sequence analysis. Cold Spring Harbour Symp Quant Biol 52:863-867
24. Nachman MW, Crowell SL (2000) Estimate of the mutation rate per nucleotide in humans. Genetics 156:297-304
25. Nakayama I, Biagi CA, Koide N, Devlin RH (1999) Identification of a sex-linked GH pseudogene in one of two species of Japanese salmon (Oncorhynchus masou and O. rhodurus). Aquaculture 173:65-72
26. Oakly TH, Philips RB (1999) Phylogeny of salmonine fishes based on growth hormone introns: Atlantic (Salmo) and pacific (Oncorhynchos) salmon are not sister taxa. Mol Phyl Evol 3:381-393
27. Oohara I, Sawano K, Okazaki T (1997) Mitochondrial DNA sequence analysis of the Masu Salmon-Phylogeny in the genus Oncorhynchus. Mol Phyl Evol 1:71-78
28. Shimmin LC, Chang BHJ, Li WH (1993a) Male-driven evolution of DNA sequences. Nature 362:745-747
29. Shimmin LC, Chang BHJ, Hewett-Emmett D, Li WH (1993b) Potential problems in estimating the male-to-female mutation rate ratio from DNA sequence data. J Mol Evol 37:160-166
30. Vogel F, Motulsky AG (1997) Human genetics: problems and approaches, third edn. Springer-Verlag, New York
31. Xu X, Peng M, Fang Z (2000) The direction of microsatellite mutations is dependent upon allele length. Nat Genet 24:396-399
32. Zhang Q, Nakayama I, Fujiwara A, Kobayashi T, Oohara I, Masaoka T, Kitamura S, Devlin RH (2001) Sex identification by male-specific growth hormone pseudogene (GH-ψ) in Oncorhynchus masou complex and a related hybrid. Genetica 111:111-118