메뉴 건너뛰기




Volumn 185, Issue 3, 2003, Pages 1018-1026

Comparative analyses of the complete genome sequences of Pierce's disease and citrus variegated chlorosis strains of Xylella fastidiosa

(58)  Van Sluys, M A a   De Oliveira, M C a   Monteiro Vitorello, C B a   Miyaki, C Y a   Furlan, L R c,k   Camargo, L E A a   Da Silva, A C R a   Moon, D H a   Takita, M A b   Lemos, E G M c   Machado, M A b   Ferro, M I T c   Da Silva, F R d   Goldman, M H S a   Goldman, G H a   Lemos, M V F c   El Dorry, H a   Tsai, S M a   Carrer, H a   Carraro, D M e   more..


Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID SEQUENCE; ARTICLE; BACTERIAL COLONIZATION; CHLOROSIS; COTYLEDON; GENE ISOLATION; GENE SEQUENCE; GENETIC ANALYSIS; GENETIC ORGANIZATION; GENETIC VARIABILITY; GEOGRAPHIC DISTRIBUTION; NONHUMAN; NUCLEOTIDE SEQUENCE; PIERCE DISEASE; PRIORITY JOURNAL; PROTEIN ASSEMBLY; STRAIN DIFFERENCE; TISSUE SPECIFICITY; VIRUS GENOME; XYLELLA FASTIDIOSA;

EID: 0037310805     PISSN: 00219193     EISSN: None     Source Type: Journal    
DOI: 10.1128/JB.185.3.1018-1026.2003     Document Type: Article
Times cited : (283)

References (39)
  • 2
    • 0035091249 scopus 로고    scopus 로고
    • Multiplication and movement of a citrus strain of Xylella fastidiosa within sweet orange
    • Almeida, R. P. P., E. F. Pereira, and A. H. Purcell. 2001. Multiplication and movement of a citrus strain of Xylella fastidiosa within sweet orange. Plant Dis. 85:382-386.
    • (2001) Plant Dis. , vol.85 , pp. 382-386
    • Almeida, R.P.P.1    Pereira, E.F.2    Purcell, A.H.3
  • 4
    • 0012951236 scopus 로고    scopus 로고
    • Variegated chlorosis
    • L. W. Timmer, S. M. Garnsey, and J. H. Graham (ed.). American Phytopathological Society, Saint Paul, Minn.
    • Beretta, M. J. G., and R. P. Leite, Jr. 2000. Variegated chlorosis, p. 50-51. In L. W. Timmer, S. M. Garnsey, and J. H. Graham (ed.), Compendium of citrus diseases, 2nd ed. American Phytopathological Society, Saint Paul, Minn.
    • (2000) Compendium of Citrus Diseases, 2nd Ed. , pp. 50-51
    • Beretta, M.J.G.1    Leite R.P., Jr.2
  • 5
    • 0000241874 scopus 로고
    • GeneMark: Parallel gene recognition for both DNA strands
    • Borodovsky, M., and J. McIninch. 1993. GeneMark: parallel gene recognition for both DNA strands. Comput. Chem. 17:123-133.
    • (1993) Comput. Chem. , vol.17 , pp. 123-133
    • Borodovsky, M.1    McIninch, J.2
  • 6
    • 0033990708 scopus 로고    scopus 로고
    • Use of 16S rDNA sequences as signature characters to identify Xylella fastidiosa
    • Chen, J., D. Banks, R. L. Jarret, C. J. Chang, and B. J. Smith. 2000. Use of 16S rDNA sequences as signature characters to identify Xylella fastidiosa. Curr. Microbiol. 40:29-33.
    • (2000) Curr. Microbiol. , vol.40 , pp. 29-33
    • Chen, J.1    Banks, D.2    Jarret, R.L.3    Chang, C.J.4    Smith, B.J.5
  • 8
  • 10
    • 0033485517 scopus 로고    scopus 로고
    • Improved microbial gene identification with GLIMMER (306K, PDF format)
    • Delcher, A. L., D. Harmon, S. Kasif, O. White, and S. L. Salzberg. 1999. Improved microbial gene identification with GLIMMER (306K, PDF format). Nucleic Acids Res. 27:4636-4641.
    • (1999) Nucleic Acids Res. , vol.27 , pp. 4636-4641
    • Delcher, A.L.1    Harmon, D.2    Kasif, S.3    White, O.4    Salzberg, S.L.5
  • 12
    • 0029377645 scopus 로고
    • A locus determining pathogenicity of Xanthomonas campestris is involved in lipopolysaccharide biosynthesis
    • Dow, J. M., A. E. Osbourn, T. J. Wilson, and M. J. Daniels. 1995. A locus determining pathogenicity of Xanthomonas campestris is involved in lipopolysaccharide biosynthesis. Mol. Plant-Microbe Interact. 8:768-777.
    • (1995) Mol. Plant-Microbe Interact. , vol.8 , pp. 768-777
    • Dow, J.M.1    Osbourn, A.E.2    Wilson, T.J.3    Daniels, M.J.4
  • 14
    • 0001699997 scopus 로고
    • Host range of Pierce's disease virus of grapes as determined by insect transmission
    • Freitag, J. H. 1951. Host range of Pierce's disease virus of grapes as determined by insect transmission. Phytopathology 41:920-934.
    • (1951) Phytopathology , vol.41 , pp. 920-934
    • Freitag, J.H.1
  • 15
    • 0031955116 scopus 로고    scopus 로고
    • Consed: A graphical tool for sequence finishing
    • Gordon, D., C. Abajian, and P. Green. 1998. Consed: a graphical tool for sequence finishing. Genome Res. 8:195-202.
    • (1998) Genome Res. , vol.8 , pp. 195-202
    • Gordon, D.1    Abajian, C.2    Green, P.3
  • 17
    • 0024871855 scopus 로고
    • Xylella fastidiosa: A xylem-limited bacterial pathogen of plants
    • Hopkins, D. L. 1989. Xylella fastidiosa: a xylem-limited bacterial pathogen of plants. Annu. Rev. Phytopathol. 27:271-290.
    • (1989) Annu. Rev. Phytopathol. , vol.27 , pp. 271-290
    • Hopkins, D.L.1
  • 18
    • 0012900052 scopus 로고    scopus 로고
    • Evaluating genome dynamics: The constraints on rearrengements within bacterial genomes
    • Hughes, D. 2000. Evaluating genome dynamics: the constraints on rearrengements within bacterial genomes. Genome Biol. 6:1-8.
    • (2000) Genome Biol. , vol.6 , pp. 1-8
    • Hughes, D.1
  • 19
    • 0021912771 scopus 로고
    • Genetic relationships of some fastidious xylem-limited bacteria
    • Kamper, S. M., W. J. French, and S. R. deKloet. 1985. Genetic relationships of some fastidious xylem-limited bacteria. Int. J. Syst. Bacteriol. 35:185-188.
    • (1985) Int. J. Syst. Bacteriol. , vol.35 , pp. 185-188
    • Kamper, S.M.1    French, W.J.2    DeKloet, S.R.3
  • 21
    • 0030854739 scopus 로고    scopus 로고
    • tRNAscan-SE: A program for improved detection of transfer RNA genes in genomic sequences
    • Lowe, T. M., and S. R. Eddy. 1997. tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequences. Nucleic Acids Res. 25:955-964.
    • (1997) Nucleic Acids Res. , vol.25 , pp. 955-964
    • Lowe, T.M.1    Eddy, S.R.2
  • 23
    • 0031025080 scopus 로고    scopus 로고
    • A cloned pathogenicity island from enteropathogenic Escherichia coli confers the attaching and effacing phenotype on E. coli K-12
    • McDaniel, T. K., and J. B. Kaper. 1997. A cloned pathogenicity island from enteropathogenic Escherichia coli confers the attaching and effacing phenotype on E. coli K-12. Mol. Microbiol. 23:399-407.
    • (1997) Mol. Microbiol. , vol.23 , pp. 399-407
    • McDaniel, T.K.1    Kaper, J.B.2
  • 24
    • 0035072623 scopus 로고    scopus 로고
    • Phylogenetic relationships of Xylella fastidiosa strains from different hosts, based on 16S rDNA and 16S-23S intergenic spacer sequences
    • Mehta, A., and Y. R. Rosato. 2001. Phylogenetic relationships of Xylella fastidiosa strains from different hosts, based on 16S rDNA and 16S-23S intergenic spacer sequences. Int. J. Syst. Evol. Microbiol. 51:311-318.
    • (2001) Int. J. Syst. Evol. Microbiol. , vol.51 , pp. 311-318
    • Mehta, A.1    Rosato, Y.R.2
  • 25
    • 0023984847 scopus 로고
    • Optimal alignments in linear space
    • Myers, E. W., and W. Miller. 1988. Optimal alignments in linear space. Comput. Appl. Biosci. 4:11-17.
    • (1988) Comput. Appl. Biosci. , vol.4 , pp. 11-17
    • Myers, E.W.1    Miller, W.2
  • 26
    • 0034682335 scopus 로고    scopus 로고
    • Lateral gene transfer and the nature of bacterial innovation
    • Ochman, H., J. G. Lawrence, and E. A. Groisman. 2000. Lateral gene transfer and the nature of bacterial innovation. Nature 405:299-304.
    • (2000) Nature , vol.405 , pp. 299-304
    • Ochman, H.1    Lawrence, J.G.2    Groisman, E.A.3
  • 28
    • 0028866731 scopus 로고
    • Specific PCR detection and identification of Xylella fastidiosa strains causing citrus variegated chlorosis
    • Pooler, M. R., and J. S. Hartung. 1995. Specific PCR detection and identification of Xylella fastidiosa strains causing citrus variegated chlorosis. Curr. Microbiol. 31:377-381.
    • (1995) Curr. Microbiol. , vol.31 , pp. 377-381
    • Pooler, M.R.1    Hartung, J.S.2
  • 29
    • 0029908527 scopus 로고    scopus 로고
    • Fastidious xylem-limited bacterial plant pathogens
    • Purcell, A. H., and D. H. Hopkins. 1996. Fastidious xylem-limited bacterial plant pathogens. Annu. Rev. Phytopathol. 34:131-151.
    • (1996) Annu. Rev. Phytopathol. , vol.34 , pp. 131-151
    • Purcell, A.H.1    Hopkins, D.H.2
  • 30
    • 0034994798 scopus 로고    scopus 로고
    • An evaluation of the genetic diversity of Xylella fastidiosa isolated from diseased citrus and coffee in São Paulo, Brazil
    • Qin, X., V. S. Miranda, M. A. Machado, E. G. M. Lemos, and J. S. Hartung. 2001. An evaluation of the genetic diversity of Xylella fastidiosa isolated from diseased citrus and coffee in São Paulo, Brazil. J. Bacteriol. 91:599-605.
    • (2001) J. Bacteriol. , vol.91 , pp. 599-605
    • Qin, X.1    Miranda, V.S.2    Machado, M.A.3    Lemos, E.G.M.4    Hartung, J.S.5
  • 31
    • 0031740749 scopus 로고    scopus 로고
    • Int-B13, an unusual site-specific recombinase of the bacteriophage P4 integrase family, is responsible for chromosomal insertion of the 105-kilobase clc element of Pseudomonas sp. strain B13
    • Ravatn, R., S. Studer, A. J. Zehnder, and J. R. van der Meer. 1998. Int-B13, an unusual site-specific recombinase of the bacteriophage P4 integrase family, is responsible for chromosomal insertion of the 105-kilobase clc element of Pseudomonas sp. strain B13. J. Bacteriol. 180:5505-5514.
    • (1998) J. Bacteriol. , vol.180 , pp. 5505-5514
    • Ravatn, R.1    Studer, S.2    Zehnder, A.J.3    Van der Meer, J.R.4
  • 34
    • 0029837945 scopus 로고    scopus 로고
    • Molecular characterization of the oaf A locus responsible for acetylation of Salmonella typhimurium O antigen: OafA is a member of a family of integral membrane trans-acylases
    • Slauch, J. M., A. A. Lee, M. J. Mahan, and J. J. Mekalanos. 1996. Molecular characterization of the oaf A locus responsible for acetylation of Salmonella typhimurium O antigen: OafA is a member of a family of integral membrane trans-acylases. J. Bacteriol. 178:5904-5909.
    • (1996) J. Bacteriol. , vol.178 , pp. 5904-5909
    • Slauch, J.M.1    Lee, A.A.2    Mahan, M.J.3    Mekalanos, J.J.4
  • 35
    • 0032574728 scopus 로고    scopus 로고
    • Evolution of rhizobia by acquisition of a 500-kb symbiosis island that integrates into a phe-tRNA gene
    • Sullivan, J. T., and C. W. Robson. 1998. Evolution of rhizobia by acquisition of a 500-kb symbiosis island that integrates into a phe-tRNA gene. Proc. Natl. Acad. Sci. USA 95:5145-5149.
    • (1998) Proc. Natl. Acad. Sci. USA , vol.95 , pp. 5145-5149
    • Sullivan, J.T.1    Robson, C.W.2
  • 37
    • 0004267362 scopus 로고    scopus 로고
    • University of California Agriculture and Natural Resources publication 21600. University of California
    • Varela, L. G., R. J. Smith, and P. A. Phillips. 2001. Pierce's disease. University of California Agriculture and Natural Resources publication 21600. University of California.
    • (2001) Pierce's Disease
    • Varela, L.G.1    Smith, R.J.2    Phillips, P.A.3
  • 38
    • 0001350089 scopus 로고
    • Xylella fastidiosa new-genus new-species gramnegative xylem-limited fastidious plant bacteria related to Xanthomonas spp.
    • Wells, J. M., B. C. Raju, H.-Y. Hung, W. G. Weisburg, L. Mandelco-Paul, and D. J. Brenner. 1987. Xylella fastidiosa new-genus new-species gramnegative xylem-limited fastidious plant bacteria related to Xanthomonas spp. Int. J. Syst. Bacteriol. 37:135-143.
    • (1987) Int. J. Syst. Bacteriol. , vol.37 , pp. 135-143
    • Wells, J.M.1    Raju, B.C.2    Hung, H.-Y.3    Weisburg, W.G.4    Mandelco-Paul, L.5    Brenner, D.J.6
  • 39
    • 0037082414 scopus 로고    scopus 로고
    • Integration sites for genetic elements in prokaryotic tRNA and tmRNA genes: Sublocation preference of integrase subfamilies
    • Williams, K. P. 2002. Integration sites for genetic elements in prokaryotic tRNA and tmRNA genes: sublocation preference of integrase subfamilies. Nucleic Acids Res. 30:866-875.
    • (2002) Nucleic Acids Res. , vol.30 , pp. 866-875
    • Williams, K.P.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.