AFLP-based assessment of genetic diversity among nine alfalfa germplasms using bulk DNA templates

Genome

Volumn 46, Issue 1, 2003, Pages 51-58

  Segovia Lerma, A ^a   Cantrell, R G ^b,c   Conway, J M ^b   Ray, I M ^b  

^a UNIVERSIDAD AUTÓNOMA DE CHIHUAHUA   (Mexico)

^b NEW MEXICO STATE UNIVERSITY   (United States)

^c Agricultural and Environmental Research Division   (United States)

Author keywords

DNA bulking; Genetic distance; Medicago sativa

Indexed keywords

DNA; DNA PRIMERS; GENETIC MARKERS; MEDICAGO SATIVA; PHYLOGENY; SEQUENCE ANALYSIS, DNA; VARIATION (GENETICS);

EMBRYOPHYTA; MEDICAGO; MEDICAGO SATIVA; MEDICAGO SATIVA SUBSP. FALCATA;

EID: 0037309029     PISSN: 08312796     EISSN: None     Source Type: Journal    
DOI: 10.1139/g02-100     Document Type: Article

References (31)

1. Barnes, D.K., Bingham, E.T., Murphy, R.P., Hunt, O.J., Beard, D.F., Skrdla, W.H., and Teuber, L.R. 1977. Alfalfa germplasm in the United States: genetic vulnerability, use, improvement, and maintenance. United States Department of Agriculture - Agricultural Research Service Technical Bulletin No. 1571. Washington, D.C.
2. Barnes, D.K., Golpen, B.P., and Baylor, J.E. 1988. Highlights in the U.S.A. and Canada. In Alfalfa and alfalfa improvement. Edited by A.A. Hanson, D.K. Barnes, and R.R. Hill, Jr. Agronomy Monographs No. 29. American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America, Madison, Wis. pp. 1-24.
3. Barcaccia, G., Albertini, E., Tavoletti, S., Falcinelli, M., and Veronesi, F. 1999. AFLP fingerprinting in Medicago spp. Its development and application in linkage mapping. Plant Breed. 118: 335-340.
4. Barcaccia, G., Albertini, E., Rosellini, D., Tavoletti, S., and Veronesi, F. 2000. Inheritance and mapping of 2n-egg production in diploid alfalfa. Genome, 43: 528-537.
5. Basigalup, D.H., Barnes, D.K., and Stucker, R.E. 1995. Development of a core collection for perennial Medicago plant introductions. Crop Sci. 35: 1163-1168.
6. Bingham, E.T. 1975. Registration of alfalfa germplasm from cultivated x wild hybrids. Crop Sci. 15: 889.
7. Bingham, E.T. 1993. Registration of WISFAL alfalfa (Medicago sativa ssp. falcata) tetraploid germplasm derived from diploids. Crop Sci. 33: 217-218.
8. Brouwer, D.J., Duke, S.H., and Osborn, T.C. 2000. Mapping genetic factors associated with winter hardiness, fall growth, and freezing injury in autotetraploid alfalfa. Crop Sci. 40: 1387-1396.
9. Brummer, E.C. 1999. Capturing heterosis in forage crop cultivar development. Crop Sci. 39: 943-954.
10. Brummer, E.C., Kochert, G., and Bouton, J.H. 1991. RFLP variation in diploid and tetraploid alfalfa. Theor. Appl. Genet. 83: 89-96.
11. Brummer, E.C., Bouton, J.H., and Kochert, G. 1995. Analysis of annual Medicago species using RAPD markers. Genome, 38: 362-367.
12. Cheres, M.T., Miller, J.F., Crane, J.M., and Knapp, S.J. 2000. Genetic distance as a predictor of heterosis and hybrid performance within and between heterotic groups in sunflower. Theor. Appl. Genet. 100: 889-894.
13. Diwan, N., Bhagwat, A.A., Bauchan, G.R., and Cregan, P.B. 1997. Simple sequence repeat DNA markers in alfalfa and perennial and annual Medicago species. Genome, 40: 887-895.
14. Ghérardi, M., Mangin, B., Goffinet, B., Bonnet, D., and Huguet, T. 1998. A method to measure genetic distance between allogamous populations of alfalfa (Medicago sativa) using RAPD markers. Theor. Appl. Genet. 96: 406-412.
15. Hongtrakul, V., Huestis, G.M., and Knapp S.J. 1997. Amplified fragment length polymorphisms as a tool for DNA fingerprinting sunflower germplasm: genetic diversity among oilseed inbred lines. Theor. Appl. Genet. 95: 400-407.
16. Kidwell, K.K., and Osborn, T.C. 1992. Simple plant DNA isolation procedures. In Plant genomes: methods for genetic and physical mapping. Edited by J. Beckman and T.C. Osborn. Kluwer Academic Publishers, Dordrecht, Netherlands. pp 1-13.
17. Kidwell, K.K., Woodfield, D.R., Bingham, E.T., and Osborn, T.C. 1994a. Molecular marker diversity and yield of isogenic 2x and 4x single crosses of alfalfa. Crop Sci. 34: 784-788.
18. Kidwell, K.K., Austin, D.F., and Osborn T.C. 1994b. RFLP evaluation of nine Medicago accessions representing the original germplasm sources for North American alfalfa cultivars. Crop Sci. 34: 230-236.
19. Kidwell, K.K., Hartweck, L.M., Yandell, B.S., Crump, P.M., Brummer, J.E., Moutray, J., and Osborn, T.C. 1999. Forage yields of alfalfa populations derived from parents selected on the basis of molecular marker diversity. Crop Sci. 39: 223-227.
20. Melchinger, A.E., and Gumber, R.K. 1998. Overview of heterosis and heterotic groups in agronomic crops. In Concepts and breeding of heterosis in crop plants. Edited by K.R. Lamkey and J.E. Staub. Special Publication No. 25. Crop Science Society of America, Madison, Wis. pp. 29-44.
21. Messmer, M.M., Melchinger, A.E., Boppenmaier, J., Brunklaus-Jung, E., and Herrmann, R.G. 1992. Relationships among early European maize inbreds. I. Genetic diversity among flint and dent lines revealed by RFLPs. Crop Sci. 32: 1301-1309.
22. Mumm, R.H., and Dudley, J.W. 1994. A classification of 148 U.S. maize inbreds. I. Cluster analysis based on RFLPs. Crop Sci. 34: 842-851.
23. Powell, W., Morgante, M., Andre, C., Hanafey, M., Vogel, J., Tingey, S., and Rafalski, A. 1996. The comparison of RFLP, RAPD, AFLP, and SSR (microsatellite) markers for germplasm analysis. Mol. Breed. 2: 225-238.
24. Quiros, C.F., and Bauchan, G.R. 1988. The genus Medicago and the origin of the Medicago sativa complex. In Alfalfa and alfalfa improvement. Edited by A.A. Hanson, D.K Barnes, and R.R. Hill, Jr. Agronomy Monographs No. 29. American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America, Madison, Wis. pp. 93-124.
25. Rohlf, F.J. 1998. NTSYSpc version 2.02j. Numerical taxonomy and multivariate analysis system. Exeter Software, Setauket, N.Y.
26. Sedcole, J.R. 1977. Number of plants necessary to recover a trait. Crop Sci. 17: 667-668.
27. Swofford, D.L., and Olson, G.J. 1990. Phylogeny reconstruction. In Molecular systematics. Edited by D.M. Hillis and C. Mortiz. Sinauer Associates, Sunderland, Mass. pp. 411-501.
28. Vos, P., Hogers, R., Bleeker, M., Reijans, M., van de Lee, T., Hornes, M., Frijters, A., Pot, J., Peleman, J., Kuiper, M., and Zabeau, M. 1995. AFLP: a new technique for DNA fingerprinting. Nucleic Acids Res. 23: 4407-4414.
29. Yap, I.V., and Nelson, R. 1996. WinBoot: A program for bootstrap analysis of binary data to determine the confidence limits of UPGMA-based dendrograms. International Rice Research Institute, Manila, Philippines.
30. Yee, E., Kidwell, K.K., Sills, G.R., and Lumpkin, T.A. 1999. Diversity among selected Vigna angularis accessions on the basis of RAPD and AFLP markers. Crop Sci. 39: 268-275.
31. Yu, K., and Pauls, K.P. 1993. Rapid estimation of genetic relatedness among heterogeneous populations of alfalfa by random amplification of bulked genomic DNA samples. Crop Sci. 86: 788-794.