-
2
-
-
0034682882
-
Geometric analysis and comparison of protein-DNA interfaces: Why is there no simple code for recognition?
-
Pabo C.O., Nekludova L. 2000. Geometric analysis and comparison of protein-DNA interfaces: why is there no simple code for recognition? J. Mol. Biol. 301, 597-624.
-
(2000)
J. Mol. Biol.
, vol.301
, pp. 597-624
-
-
Pabo, C.O.1
Nekludova, L.2
-
3
-
-
0038497542
-
Molecular structure of nucleic acids
-
Watson J.D., Crick F.H.C. 1953. Molecular structure of nucleic acids. Nature (London). 171, 737-738.
-
(1953)
Nature (London)
, vol.171
, pp. 737-738
-
-
Watson, J.D.1
Crick, F.H.C.2
-
4
-
-
0033574510
-
Protein-DNA interactions: A structural analysis
-
Jones S., Heyningen P., Berman H.M., Thornton J.M. 1999. Protein-DNA interactions: a structural analysis. J. Mol. Biol. 287, 877-896.
-
(1999)
J. Mol. Biol.
, vol.287
, pp. 877-896
-
-
Jones, S.1
Heyningen, P.2
Berman, H.M.3
Thornton, J.M.4
-
5
-
-
0033573827
-
Structural features of protein-nucleic acid recognition sites
-
Nadassy K., Wodak S.J., Janin J. 1999. Structural features of protein-nucleic acid recognition sites. Biochemistry. 38, 1999-2017.
-
(1999)
Biochemistry
, vol.38
, pp. 1999-2017
-
-
Nadassy, K.1
Wodak, S.J.2
Janin, J.3
-
6
-
-
0028839860
-
Comprehensive analysis of hydrogen bonds in regulatory protein DNA-complexes: In search of common principles
-
Mandel-Gutfreund Y., Schueler O., Margalit H. 1995. Comprehensive analysis of hydrogen bonds in regulatory protein DNA-complexes: in search of common principles. J. Mol. Biol. 253, 370-382.
-
(1995)
J. Mol. Biol.
, vol.253
, pp. 370-382
-
-
Mandel-Gutfreund, Y.1
Schueler, O.2
Margalit, H.3
-
7
-
-
0000307053
-
A view of the three dimensional structure of globular proteins
-
Peters D., Peters J. 1993. A view of the three dimensional structure of globular proteins. Mol. Eng. 2, 375-400.
-
(1993)
Mol. Eng.
, vol.2
, pp. 375-400
-
-
Peters, D.1
Peters, J.2
-
8
-
-
0029588555
-
Complex salt bridges in proteins: Statistical analysis of structure and function
-
Musofia B., Buchner V., Arad D. 1995. Complex salt bridges in proteins: statistical analysis of structure and function. J. Mol. Biol. 254, 761-770.
-
(1995)
J. Mol. Biol.
, vol.254
, pp. 761-770
-
-
Musofia, B.1
Buchner, V.2
Arad, D.3
-
9
-
-
0029793528
-
Alternating charge clusters of side chains: New surface structural invariants observed in calf eye lens gamma-crystallins
-
Chirgadze Yu.N., Tabolina O.Yu. 1996. Alternating charge clusters of side chains: new surface structural invariants observed in calf eye lens gamma-crystallins. Protein Eng. 9, 745-754.
-
(1996)
Protein Eng.
, vol.9
, pp. 745-754
-
-
Chirgadze, Yu.N.1
Tabolina, O.Yu.2
-
10
-
-
0344457301
-
Spatial sign-alternating charge clusters in globular proteins
-
Chirgadze Yu.N., Larionova E.A. 1999. Spatial sign-alternating charge clusters in globular proteins. Protein Eng. 12, 101-105.
-
(1999)
Protein Eng.
, vol.12
, pp. 101-105
-
-
Chirgadze, Yu.N.1
Larionova, E.A.2
-
11
-
-
0017411710
-
The Protein Data Bank: A computer-based archival file of macromolecular structures
-
Bernstein F.C., Koetzle T., Williams G., Meyer E., Brice M., Rogers J., Kennard O., Shimanouchi T., Tasumi M. 1977. The Protein Data Bank: a computer-based archival file of macromolecular structures. J. Mol. Biol. 112, 535-542.
-
(1977)
J. Mol. Biol.
, vol.112
, pp. 535-542
-
-
Bernstein, F.C.1
Koetzle, T.2
Williams, G.3
Meyer, E.4
Brice, M.5
Rogers, J.6
Kennard, O.7
Shimanouchi, T.8
Tasumi, M.9
-
12
-
-
0030587774
-
Zif268 protein-DNA complex refined at 1.6 Å: A model system for understanding zinc finger-DNA interactions
-
Elrod-Erickson M., Rould M.A., Nekludova L., Pabo CO. 1996. Zif268 protein-DNA complex refined at 1.6 Å: a model system for understanding zinc finger-DNA interactions. Structure. 4, 1171-1180.
-
(1996)
Structure
, vol.4
, pp. 1171-1180
-
-
Elrod-Erickson, M.1
Rould, M.A.2
Nekludova, L.3
Pabo, C.O.4
-
13
-
-
0032964122
-
DNA-binding mechanisms of the monomeric orphan nuclear receptor NGFI-B
-
Meinke G., Sigler P.B. 1999. DNA-binding mechanisms of the monomeric orphan nuclear receptor NGFI-B. Nature Struct. Biol. 6, 471-477.
-
(1999)
Nature Struct. Biol.
, vol.6
, pp. 471-477
-
-
Meinke, G.1
Sigler, P.B.2
-
14
-
-
0026657433
-
Refined 1.8 Å crystal structure of the λ repressor-operator complex
-
Beamer L.J., Pabo C.O. 1992. Refined 1.8 Å crystal structure of the λ repressor-operator complex. J. Mol. Biol. 227, 177-196.
-
(1992)
J. Mol. Biol.
, vol.227
, pp. 177-196
-
-
Beamer, L.J.1
Pabo, C.O.2
-
15
-
-
0032936785
-
A new use for the "wing" of the "winged" helix-turn-helix motif in the HSF-DNA cocrystal
-
Littlefield O., Nelson H.C.M. 1999. A new use for the "wing" of the "winged" helix-turn-helix motif in the HSF-DNA cocrystal. Nature Struct. Biol. 6, 464-470.
-
(1999)
Nature Struct. Biol.
, vol.6
, pp. 464-470
-
-
Littlefield, O.1
Nelson, H.C.M.2
-
16
-
-
0026656038
-
Crystal structure at 1.7 Å of the bovine papillomavirus-1 E2 DNA-binding domain bound to its DNA target
-
Hegde R.S., Grossman S.R., Laimins L.A., Sigler P.B. 1992. Crystal structure at 1.7 Å of the bovine papillomavirus-1 E2 DNA-binding domain bound to its DNA target. Nature. 359, 505-512.
-
(1992)
Nature
, vol.359
, pp. 505-512
-
-
Hegde, R.S.1
Grossman, S.R.2
Laimins, L.A.3
Sigler, P.B.4
-
17
-
-
0032499801
-
Three-dimensional structure of the Stat3β homodimer bound to DNA
-
Becker S., Groner B., Muller C.W. 1998. Three-dimensional structure of the Stat3β homodimer bound to DNA. Nature. 394, 145-151.
-
(1998)
Nature
, vol.394
, pp. 145-151
-
-
Becker, S.1
Groner, B.2
Muller, C.W.3
-
18
-
-
0028979479
-
Structure of NF-κB p50 homodimer bound to a κB site
-
Ghosh G., Van Duyne G., Ghosh S., Sigler P.B. 1995. Structure of NF-κB p50 homodimer bound to a κB site. Nature. 373, 303-310.
-
(1995)
Nature
, vol.373
, pp. 303-310
-
-
Ghosh, G.1
Van Duyne, G.2
Ghosh, S.3
Sigler, P.B.4
-
19
-
-
0031574026
-
NUCPLOT: A program to generate schematic diagrams of protein-nucleic acid interactions
-
Luscombe N.M., Laskowski R.A., Thornton J.M. 1997. NUCPLOT: a program to generate schematic diagrams of protein-nucleic acid interactions. Nucleic Acids Res. 25, 4940-4945.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 4940-4945
-
-
Luscombe, N.M.1
Laskowski, R.A.2
Thornton, J.M.3
-
20
-
-
0035438251
-
Formation of DNA-recognizing module in transcription factors: Phage λ repressor and murine immunoglobulin factor NFkB
-
Chirgadze Yu.N., Larionova E.A. 2001. Formation of DNA-recognizing module in transcription factors: phage λ repressor and murine immunoglobulin factor NFkB. Mol. Biol. 35, 836-843.
-
(2001)
Mol. Biol.
, vol.35
, pp. 836-843
-
-
Chirgadze, Yu.N.1
Larionova, E.A.2
|