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Volumn 19, Issue 1, 2003, Pages 30-36

Representation of DNA sequences with virtual potentials and their processing by (SEQREP) Kohonen self-organizing maps

Author keywords

[No Author keywords available]

Indexed keywords

ADENINE; DNA BASE; GUANINE; VIRUS ENVELOPE PROTEIN;

EID: 0037252510     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/19.1.30     Document Type: Article
Times cited : (7)

References (22)
  • 1
    • 0012777568 scopus 로고    scopus 로고
    • JATOON: Java tools for neural networks
    • Aires-de-Sousa,J. (2002) JATOON: Java tools for neural networks. Chemom. Intell. Lab. Syst., 61, 167-173.
    • (2002) Chemom. Intell. Lab. Syst. , vol.61 , pp. 167-173
    • Aires-de-Sousa, J.1
  • 2
    • 0033787572 scopus 로고    scopus 로고
    • Significance of HIV-1 genetic subtypes
    • Alaeus,A. (2000) Significance of HIV-1 genetic subtypes. Scand. J. Infect. Dis., 32, 455-463.
    • (2000) Scand. J. Infect. Dis. , vol.32 , pp. 455-463
    • Alaeus, A.1
  • 4
    • 0002946570 scopus 로고    scopus 로고
    • Universal sequence map (USM) of arbitrary discrete sequences
    • Almeida,J.S. and Vinga,S. (2002) Universal sequence map (USM) of arbitrary discrete sequences. BMC Bioinformatics, 3, 6.
    • (2002) BMC Bioinformatics. , vol.3 , pp. 6
    • Almeida, J.S.1    Vinga, S.2
  • 5
    • 0036250811 scopus 로고    scopus 로고
    • Alu repeats and human genomic diversity
    • Batzer,M.A. and Deininger,P.L. (2002) Alu repeats and human genomic diversity. Nat. Rev. Genet., 3, 370-379.
    • (2002) Nat. Rev. Genet. , vol.3 , pp. 370-379
    • Batzer, M.A.1    Deininger, P.L.2
  • 6
    • 0025340372 scopus 로고
    • Chaos game representation of gene structure
    • Jeffrey,H.J. (1990) Chaos game representation of gene structure. Nucleic Acids Res., 18, 2163-2170.
    • (1990) Nucleic Acids Res. , vol.18 , pp. 2163-2170
    • Jeffrey, H.J.1
  • 7
    • 0030094146 scopus 로고    scopus 로고
    • CENSOR - A program for identification and elimination of repetitive elements from DNA sequences
    • Jurka,J., Klonowski,P., Dagman,V. and Pelton,P. (1996) CENSOR - a program for identification and elimination of repetitive elements from DNA sequences. Comput. Chem., 20, 119-122.
    • (1996) Comput. Chem. , vol.20 , pp. 119-122
    • Jurka, J.1    Klonowski, P.2    Dagman, V.3    Pelton, P.4
  • 8
    • 0003527079 scopus 로고
    • Self-Organization and Associative Memory
    • Springer, Berlin
    • Kohonen,T. (1988) Self-Organization and Associative Memory. Springer, Berlin.
    • (1988)
    • Kohonen, T.1
  • 10
    • 0035802431 scopus 로고    scopus 로고
    • Differential stress induction of individual Alu loci: Implications for transcription and retrotransposition
    • Li,T.H. and Schmid,C.W. (2001) Differential stress induction of individual Alu loci: implications for transcription and retrotransposition. Gene, 276, 135-141.
    • (2001) Gene , vol.276 , pp. 135-141
    • Li, T.H.1    Schmid, C.W.2
  • 12
    • 0037029914 scopus 로고    scopus 로고
    • HIV T cell vaccines, the importance of clades
    • McMichael,A., Mwau,M. and Hanke,T. (2002) HIV T cell vaccines, the importance of clades. Vaccine, 20, 1918-1921.
    • (2002) Vaccine , vol.20 , pp. 1918-1921
    • McMichael, A.1    Mwau, M.2    Hanke, T.3
  • 13
    • 0033765904 scopus 로고    scopus 로고
    • Immunoreactivity of intact virions of human immunodeficiency virus type 1 (HIV-1) reveals the existence of fewer HIV-1 immunotypes than genotypes
    • Nyambi,P.N., Nadas,A., Mbah,H.A., Burda,S., Williams,C., Gorny,M.K. and Zolla-Pazner,S. (2000) Immunoreactivity of intact virions of human immunodeficiency virus type 1 (HIV-1) reveals the existence of fewer HIV-1 immunotypes than genotypes. J. Virol., 74, 10670-10680.
    • (2000) J. Virol. , vol.74 , pp. 10670-10680
    • Nyambi, P.N.1    Nadas, A.2    Mbah, H.A.3    Burda, S.4    Williams, C.5    Gorny, M.K.6    Zolla-Pazner, S.7
  • 14
    • 0035941393 scopus 로고    scopus 로고
    • The impact of immigration on env HIV-1 subtype distribution among heterosexuals in the Netherlands: Influx of subtype B and non-B strains
    • Op de Coul,E.L.M., Coutinho,R.A., van der Schoot,A., van Doornum,G.J.J., Lukashov,V.V., Goudsmit,J. and Cornellissen,M. (2001) The impact of immigration on env HIV-1 subtype distribution among heterosexuals in the Netherlands: influx of subtype B and non-B strains. AIDS, 15, 2277-2286.
    • (2001) AIDS , vol.15 , pp. 2277-2286
    • Op de Coul, E.L.M.1    Coutinho, R.A.2    van der Schoot, A.3    van Doornum, G.J.J.4    Lukashov, V.V.5    Goudsmit, J.6    Cornellissen, M.7
  • 16
    • 0035324931 scopus 로고    scopus 로고
    • Characterization of DNA primary sequences based on the average distance between bases
    • Randic,M. and Basak,S.C. (2001) Characterization of DNA primary sequences based on the average distance between bases. J. Chem. Inf. Comput. Sci., 41, 561-568.
    • (2001) J. Chem. Inf. Comput. Sci. , vol.41 , pp. 561-568
    • Randic, M.1    Basak, S.C.2
  • 17
    • 0034186712 scopus 로고    scopus 로고
    • On the similarity of DNA primary sequences
    • Randic,M. and Vracko,M. (2000) On the similarity of DNA primary sequences. J. Chem. Inf. Comput. Sci., 40, 599-606.
    • (2000) J. Chem. Inf. Comput. Sci. , vol.40 , pp. 599-606
    • Randic, M.1    Vracko, M.2
  • 18
    • 0034266159 scopus 로고    scopus 로고
    • On 3D graphical representation of DNA primary sequences and their numerical characterization
    • Randic,M., Vracko,M., Nandy,A. and Basak,S.C. (2000) On 3D graphical representation of DNA primary sequences and their numerical characterization. J. Chem. Inf. Comput. Sci., 40, 1235-1244.
    • (2000) J. Chem. Inf. Comput. Sci. , vol.40 , pp. 1235-1244
    • Randic, M.1    Vracko, M.2    Nandy, A.3    Basak, S.C.4
  • 19
    • 0034535678 scopus 로고    scopus 로고
    • Alu elements and the human genome
    • Rowold,D.J. and Herrera,R.J. (2000) Alu elements and the human genome. Genetica, 108, 57-72.
    • (2000) Genetica. , vol.108 , pp. 57-72
    • Rowold, D.J.1    Herrera, R.J.2
  • 21
    • 0028104182 scopus 로고
    • Back-propagation and counter-propagation neural networks for phylogenetic classification of ribosomal RNA sequences
    • Wu,C. and Shivakumar,S. (1994) Back-propagation and counter-propagation neural networks for phylogenetic classification of ribosomal RNA sequences. Nucleic Acids Res., 22, 4291-4299.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4291-4299
    • Wu, C.1    Shivakumar, S.2
  • 22
    • 12244264647 scopus 로고    scopus 로고
    • United States Patent 5 845 049
    • Wu,C.H. (1998) United States Patent 5 845 049.
    • (1998)
    • Wu, C.H.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.