Spatiotemporal genetic structure within white clover populations in grazed swards

Crop Science

Volumn 43, Issue 1, 2003, Pages 337-344

  Gustine, David L ^a   Elwinger, Gerald F ^a  

^a AGRICULTURAL RESEARCH SERVICE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

EMBRYOPHYTA; TRIFOLIUM; TRIFOLIUM REPENS;

EID: 0037237195     PISSN: 0011183X     EISSN: None     Source Type: Journal    
DOI: 10.2135/cropsci2003.0337     Document Type: Article

References (50)

1. Armstrong, J.S., A.J. Gibbs, R. Peakall, and G. Weiller. 1996. The RAPDistance Package. Available online at ftp://life.anu.edu.au/pub/software/RAPDistance or http://life.anu.edu.au/molecular/software/RAPDistance. Australian National University, Canberra. (verified 4 September 2002)
2. Barrett, J.P., and J.A. Silander, Jr. 1992. Seedling recruitment limitation in white clover (Trifolium repens; Leguminosae). Am. J. Bot. 79:643-649.
3. Bertorelle, G., and G. Barbujani. 1995. Analysis of DNA diversity by spatial autocorrelation. Genetics 140:811-819.
4. Brink, G.E., G.A. Pederson, M.W. Alison, D.M. Ball, J.H. Bouton, R.C. Rawls, J.A. Steudemann, and B.C. Venuto. 1999. Growth of white clover ecotypes, cultivars, and germplasms in the Southeastern USA. Crop Sci. 39:1809-1814.
5. Burdon, J.J. Intra-specific diversity in a natural population of Trifolium repens. 1980. J. Ecol. 68:717-735.
6. Cahn, M.G., and J.L. Harper. 1976. The biology of the leaf mark polymorphism in Trifolium repens L. 1. Distribution of phenotypes at a local scale. Heredity 37:309-325.
7. Chapman, D.F. 1983. Growth and demography of Trifolium repens stolons in grazed hill pastures. J. Appl. Ecol. 20:597-608.
8. Chapman, D.F., and C.B. Anderson. 1987. Natural re-seeding and Trifolium repens demography in grazed hill pasturas. I. Flowerhead appearance and fate, and seed dynamics. J. Appl. Ecol. 24:1025-1035.
9. Charlton, J.F.L. 1977. Establishment of pasture legumes in North Island hill country. I. Buried seed populations. N.Z. J. Exp. Agric. 5:211-214.
10. Chung, M.G., and B.K. Epperson. 1999. Spatial genetic structure of clonal and sexual reproduction in populations of Adenophora grandiflora (Campanuleceae). Evolution 53:1068-1078.
11. Cliff, A.D., and J.K. Ord. 1981. Spatial processes. Models and applications. Pion, London.
12. Ellstrand, N.C., and M.L. Roose. 1987. Patterns of genotypic diversity in clonal plant species. Am. J. Bot. 74:123-131.
13. Epperson, B.K., and R.W. Allard. 1989. Spatial autocorrelation analysis of the distribution of genotypes within populations of lodgepole pine. Genetics 121:369-377.
14. Excoffier, L., P.E. Smouse, and J.M. Quattro. 1992. Analysis of molecular variance inferred from metric distances among DNA haplotypes: Application to human mitochondrial DNA restrictioon data. Genetics 131:479-491.
15. Fortin, M.-J. 1999. Spatial statistics in landscape ecology. p. 253-279. In J.M. Klopatek and R.H. Gardner (ed.) Landscape ecological analysis. Issues and applications. Springer-Verlag, New York.
16. Fothergill, M., D.A. Davies, and G.J. Daniel. 1997. Morphological dynamics and seedling recruitment in young swards of three contrasting cultivars of white clover (Trifolium repens) under continuous stocking with sheep. J. Agric. Sci. 128:163-172.
17. Grime, J.P., J.G. Hodgson, and R. Hunt. 1988. Comparative plant ecology: A functional approach to common British species. Unwin Hyman, London.
18. Gustine, D.L., and D.R. Huff. 1999. Genetic variation within and among white clover populations from managed permanent pastures of the northeastern USA. Crop Sci. 39:524-530.
19. Gustine, D.L., and M.A. Sanderson. 2001a. Quantifying spatial and temporal genotypic changes in white clover populations by RAPD technology. Crop Sci. 41:143-148.
20. Gustine, D.L., and M.A. Sanderson. 2001b. Molecular analysis of white clover population structure in grazed swards during two growing seasons. Crop Sci. 41:1143-1149.
21. Harada, Y., S. Kawano, and Y. Iwasa. 1997. Probability of clonal identity: inferring the relative success of sexual versus clonal reproduction from spatial genetic patterns. J. Ecol. 85:591-600.
22. Harberd, D.J. 1963. Observations on natural clones of Trifolium repens L. New Phytol. 62:198-204.
23. Hartl, D.L., and A.G. Clark. 1989. Principles of population genetics. 2nd ed. Sinaur Associates, Sunderland, MA.
24. Heun, M., R. Schäfer-Pregl, D. Klawan, R. Castagna, M. Accerbi, B. Borghi, and F. Salamini. 1997. Site of einkorn wheat domestication identified by DNA fingerprinting. Science 278:1312-1314.
25. Huff, D.R., R. Peakall, and P.E. Smouse. 1993. RAPD variation within and among natural populations of outcrossing buffalograss. Theor. Appl. Genet. 86:927-934.
26. Karlovsky, P. 1990. Misuse of PCR. Trends Biochem. Sci. 15:419.
27. Klekowski, E.J., Jr. 1984. Mutational load in clonal plants: A study of two fern species. Evolution 38:417-426.
28. Mclellan, A.J., D. Prati, O. Kaltz, and B. Schmid. 1997. Structure and analysis of phenotypic and genetic variation in clonal plants. p. 185-210. In H. de Kroon and J. van Groenendael (ed.) The ecology and evolution of clonal plants. Backhuys Publishers, Leiden.
29. Moran, P.A.P. 1950. Notes on continuous stochastic phenomena. Biometricka 37:17-23.
30. Pederson, G.A. 1995. White clover and other perennial clovers. p. 227-236. In R.F Barnes et al. (ed.) Forages: Vol. 1, An introduction to grassland agriculture. 5th ed. Iowa State Univ., Ames.
31. Perez, T., J. Albornoz, and A. Dominguez. 1998. An evaluation of RAPD fragment reproducibility and nature. Mol. Ecol. 7:1347-1357.
32. Quiros, C.F., P. This, M. Laudie, A. Benet, A.-M. Chevre, and M. Delsney. 1995. Analysis of a set of RAPD markers by hybridization and sequencing in Brassica: A note of caution. Plant Cell Rep. 14:630-634.
33. Reusch, T.B.H., W. Hukriede, W.T. Stam, and J.L. Olsen. 1999. Differentiating between clonal growth and limited gene flow using spatial autocorrelation of microsatellites. Heredity 83:120-126.
34. Sambrook, J., E.F. Fritsch, and T. Maniatis. 1989. Molecular cloning: A Laboratory manual, 2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
35. Riedy, M.F., W.J. Hamilton, III, and C.F. Aquadro. 1992. Excess of non-parental bands in offspring from known primate pedigrees assayed using RAPD PCR. Nucleic Acids Res. 20:918.
36. Rohlf, F.J. 2000. NTSYS-pc. Numerical taxonomy and multivariate analysis system. Ver. 2.11a. Exeter Publ., Ltd., Setauket, NY.
37. Sarthou, C., S. Samadi, and M.-C. Boisselier-Dubayle. 2001. Genetic structure of the saxicole Pitcairnia geyskesii (Bromeliaceae) on inselbergs in French Guiana. Am. J. Bot. 88:861-868.
38. Scott, M.P., K.M. Haymes, and S.M. Williams. 1992. Parentage analysis using RAPD PCR. Nucleic Acids Res. 20:5493.
39. Silvertown, J.W., and J. Lovett Doust. 1993. Introduction to plant population biology. Blackwell Science, London.
40. Slatkin, M. 1985. Somatic mutations as an evolutionary force. p. 19-30. In P.J. Greenwood et al. (ed.) Evolution: Essays in honour of John Maynard Smith. Cambridge University Press, Cambridge, England.
41. Smouse, P.E., J.C. Long, and R.P. Sokal. 1986. Multiple regression and correlation extensions of the Mantel test of matrix correspondence. Syst. Zool. 35(4):627-632.
42. Smouse, P.E., and R. Peakall. 1999. Spatial autocorrelation analysis of individual multiallele and multilocus genetic structure. Heredity 82:561-573.
43. Sokal, R.R., and N.L. Oden. 1978. Spatial autocorrelation in biology. I. Methodology. Biol. J. Linnaean Soc. 10:199-228.
44. Sokal, R.R., and D.E. Wartenberg. 1983. A test of spatial autocorrelation analysis using an isolation-by-distance model. Genetics 105:219-237.
45. Stehlik, I., and R. Holderegger. 2000. Spatial genetic structure and clonal diversity of Anemone nemorosa in late successional deciduous woodland of central Europe. J. Ecol. 88:424-435.
46. Tracy, B.F., and M.A. Sanderson. 2000. Seedbank diversity in grazing lands of the Northeast United States. J. Range Manage. 53:114-118.
47. Upton, G.J.G., and B. Fingleton. 1985. Spatial data analysis by example. Vol. 1. Point pattern and quantitative data. Wiley, New York.
48. Widén, B., N. Cronberg, and M. Widén. 1994. Genotypic diversity, molecular markers and spatial distribution of genets in clonal plants, a literature survey. Folia. Geobot. Phytotaxon. 29:245-263.
49. Wright, S. 1943. Isolation by distance. Genetics 28:114-138.
50. Wright, S. 1946. Isolation by distance under diverse systems of mating. Genetics 31:39-59.