-
1
-
-
0343627965
-
SsrA-mediated tagging and proteolysis of LacI and its role in the regulation of lac operon
-
Abo, T., T. Inada, K. Ogawa, and H. Aiba. 2000. SsrA-mediated tagging and proteolysis of LacI and its role in the regulation of lac operon. EMBO J. 19:3762-3769.
-
(2000)
EMBO J.
, vol.19
, pp. 3762-3769
-
-
Abo, T.1
Inada, T.2
Ogawa, K.3
Aiba, H.4
-
2
-
-
0027409274
-
Requirement of the carboxyl terminus of the bacterial chemoreceptor for its targeted proteolysis
-
Alley, M. R. K., J. R. Maddock, and L. Shapiro. 1993. Requirement of the carboxyl terminus of the bacterial chemoreceptor for its targeted proteolysis. Science 259:1754-1757.
-
(1993)
Science
, vol.259
, pp. 1754-1757
-
-
Alley, M.R.K.1
Maddock, J.R.2
Shapiro, L.3
-
3
-
-
0035900548
-
Simultaneous and functional binding of SmpB and EF-Tu-TP to the alanyl acceptor arm of tmRNA
-
Barends, S., A. W. Karzai, R. T. Sauer, J. Wower, and B. Kraal. 2001. Simultaneous and functional binding of SmpB and EF-Tu-TP to the alanyl acceptor arm of tmRNA. J. Mol. Biol. 314:9-21.
-
(2001)
J. Mol. Biol.
, vol.314
, pp. 9-21
-
-
Barends, S.1
Karzai, A.W.2
Sauer, R.T.3
Wower, J.4
Kraal, B.5
-
4
-
-
0034646235
-
Kinetic parameters for tmRNA binding to alanyl-tRNA synthetase and elongation factor Tu from Escherichia coli
-
Barends, S., J. Wower, and B. Kraal. 2000. Kinetic parameters for tmRNA binding to alanyl-tRNA synthetase and elongation factor Tu from Escherichia coli. Biochemistry 39:2652-2658.
-
(2000)
Biochemistry
, vol.39
, pp. 2652-2658
-
-
Barends, S.1
Wower, J.2
Kraal, B.3
-
5
-
-
0028215784
-
Salmonella typhimurium loci involved in survival within macrophages
-
Baumler, A. J., J. G. Kusters, I. Stojiljkovic, and F. Heffron. 1994. Salmonella typhimurium loci involved in survival within macrophages. Infect. Immun. 62:1623-1630.
-
(1994)
Infect. Immun.
, vol.62
, pp. 1623-1630
-
-
Baumler, A.J.1
Kusters, J.G.2
Stojiljkovic, I.3
Heffron, F.4
-
7
-
-
0026079941
-
Discovery of a rhizobial RNA that is essential for symbiotic root nodule development
-
Ebeling, S., C. Kundig, and H. Hennecke. 1991. Discovery of a rhizobial RNA that is essential for symbiotic root nodule development. J. Bacteriol. 173:6373-6382.
-
(1991)
J. Bacteriol.
, vol.173
, pp. 6373-6382
-
-
Ebeling, S.1
Kundig, C.2
Hennecke, H.3
-
8
-
-
0025888266
-
Genetics of Caulobaeter crescentus
-
Ely, B. 1991. Genetics of Caulobaeter crescentus. Methods Enzymol. 204:372-384.
-
(1991)
Methods Enzymol.
, vol.204
, pp. 372-384
-
-
Ely, B.1
-
9
-
-
0017740506
-
Envelope-associated nucleoid from Caulobacter crescentus stalked and swarmer cells
-
Evinger, M., and N. Agabian. 1977. Envelope-associated nucleoid from Caulobacter crescentus stalked and swarmer cells. J. Bacteriol. 132:294-301.
-
(1977)
J. Bacteriol.
, vol.132
, pp. 294-301
-
-
Evinger, M.1
Agabian, N.2
-
10
-
-
0032993233
-
Eubacterial tmRNAs: Everywhere except the alpha-proteobacteria?
-
Felden, B., R. F. Gesteland, and J. F. Atkins. 1999. Eubacterial tmRNAs: everywhere except the alpha-proteobacteria? Biochim. Biophys. Acta 1446: 145-148.
-
(1999)
Biochim. Biophys. Acta
, vol.1446
, pp. 145-148
-
-
Felden, B.1
Gesteland, R.F.2
Atkins, J.F.3
-
11
-
-
0035845498
-
Overlapping recognition determinants within the ssrA degradation tag allow modulation of proteolysis
-
Flynn, J. M., I. Levchenko, M. Seidel, S. H. Wickner, R. T. Sauer, and T. A. Baker. 2001. Overlapping recognition determinants within the ssrA degradation tag allow modulation of proteolysis. Proc. Natl. Acad. Sci. USA 98:10584-10589.
-
(2001)
Proc. Natl. Acad. Sci. USA
, vol.98
, pp. 10584-10589
-
-
Flynn, J.M.1
Levchenko, I.2
Seidel, M.3
Wickner, S.H.4
Sauer, R.T.5
Baker, T.A.6
-
12
-
-
0022351923
-
Positive selection procedure for entrapment of insertion sequence elements in gram-negative bacteria
-
Gay, P., D. Le Coq, M. Steinmetz, T. Berkelman, and C. I. Kado. 1985. Positive selection procedure for entrapment of insertion sequence elements in gram-negative bacteria. J. Bacteriol. 164:918-921.
-
(1985)
J. Bacteriol.
, vol.164
, pp. 918-921
-
-
Gay, P.1
Le Coq, D.2
Steinmetz, M.3
Berkelman, T.4
Kado, C.I.5
-
13
-
-
0035041174
-
Physiological consequences of blocked Caulobacter crescentus dnaA expression, an essential DNA replication gene
-
Gorbatyuk, B., and G. T. Marczynski. 2001. Physiological consequences of blocked Caulobacter crescentus dnaA expression, an essential DNA replication gene. Mol. Microbiol. 40:485-497.
-
(2001)
Mol. Microbiol.
, vol.40
, pp. 485-497
-
-
Gorbatyuk, B.1
Marczynski, G.T.2
-
14
-
-
0032079329
-
The ClpXP and ClpAP proteases degrade proteins with carboxy-terminal peptide tails added by the SsrA-tagging system
-
Gottesman, S., E. Roche, Y. Zhou, and R. T. Sauer. 1998. The ClpXP and ClpAP proteases degrade proteins with carboxy-terminal peptide tails added by the SsrA-tagging system. Genes Dev. 12:1338-1347.
-
(1998)
Genes Dev.
, vol.12
, pp. 1338-1347
-
-
Gottesman, S.1
Roche, E.2
Zhou, Y.3
Sauer, R.T.4
-
15
-
-
0036529539
-
SmpB functions in various steps of trans-translation
-
Hanawa-Suetsugu, K., M. Takagi, H. Inokuchi, H. Himeno, and A. Muto. 2002. SmpB functions in various steps of trans-translation. Nucleic Acids Res. 30:1620-1629.
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. 1620-1629
-
-
Hanawa-Suetsugu, K.1
Takagi, M.2
Inokuchi, H.3
Himeno, H.4
Muto, A.5
-
16
-
-
0037072794
-
Proline residues at the C-terminus of nascent chains induce SsrA-tagging during translation termination
-
Hayes, C. S., B. Bose, and R. T. Sauer. 2002. Proline residues at the C-terminus of nascent chains induce SsrA-tagging during translation termination. J. Biol. Chem. 277:33825-33832.
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 33825-33832
-
-
Hayes, C.S.1
Bose, B.2
Sauer, R.T.3
-
17
-
-
2642666491
-
Degradation of carboxy-terminal-tagged cytoplasmic proteins by the Escherichia coli protease HflB (FtsH)
-
Herman, C., D. Thevenet, P. Bouloc, G. C. Walker, and R. D'Ari. 1998. Degradation of carboxy-terminal-tagged cytoplasmic proteins by the Escherichia coli protease HflB (FtsH). Genes Dev. 12:1348-1355.
-
(1998)
Genes Dev.
, vol.12
, pp. 1348-1355
-
-
Herman, C.1
Thevenet, D.2
Bouloc, P.3
Walker, G.C.4
D'Ari, R.5
-
18
-
-
0002777184
-
Regulation of the Caulobacter cell cycle
-
Y. V. Brun and L. J. Shimkets (ed.). ASM Press, Washington, D.C.
-
Hung, D., H. McAdams, and L. Shapiro. 1999. Regulation of the Caulobacter cell cycle, p. 361-378. In Y. V. Brun and L. J. Shimkets (ed.), Prokaryotic development. ASM Press, Washington, D.C.
-
(1999)
Prokaryotic Development
, pp. 361-378
-
-
Hung, D.1
McAdams, H.2
Shapiro, L.3
-
19
-
-
0034046020
-
The SsrA-SmpB system for protein tagging, directed degradation, and ribosome rescue
-
Karzai, A. W., E. D. Roche, and R. T. Sauer. 2000. The SsrA-SmpB system for protein tagging, directed degradation, and ribosome rescue. Nat. Struct. Biol. 7:449-455.
-
(2000)
Nat. Struct. Biol.
, vol.7
, pp. 449-455
-
-
Karzai, A.W.1
Roche, E.D.2
Sauer, R.T.3
-
20
-
-
0345465673
-
SmpB, a unique RNA-binding protein essential for the peptide-tagging activity of SsrA (tm-RNA)
-
Karzai, A. W., M. M. Susskind, and R. T. Sauer. 1999. SmpB, a unique RNA-binding protein essential for the peptide-tagging activity of SsrA (tm-RNA). EMBO J. 18:3793-3799.
-
(1999)
EMBO J.
, vol.18
, pp. 3793-3799
-
-
Karzai, A.W.1
Susskind, M.M.2
Sauer, R.T.3
-
21
-
-
0034608854
-
tmRNAs that encode proteolysis-inducing tags are found in all known bacterial genomes: A two-piece tmRNA functions in Caulobacter
-
Keiler, K. C., L. Shapiro, and K. P. Williams. 2000. tmRNAs that encode proteolysis-inducing tags are found in all known bacterial genomes: a two-piece tmRNA functions in Caulobacter. Proc. Natl. Acad. Sci. USA 97:7778-7783.
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 7778-7783
-
-
Keiler, K.C.1
Shapiro, L.2
Williams, K.P.3
-
22
-
-
0030024281
-
Role of a peptide tagging system in degradation of proteins synthesized from damaged messenger RNA
-
Keiler, K. C., P. R. Waller, and R. T. Sauer. 1996. Role of a peptide tagging system in degradation of proteins synthesized from damaged messenger RNA. Science 271:990-993.
-
(1996)
Science
, vol.271
, pp. 990-993
-
-
Keiler, K.C.1
Waller, P.R.2
Sauer, R.T.3
-
23
-
-
0028124122
-
A tRNA-like structure is present in 10Sa RNA, a small stable RNA from Escherichia coli
-
Komine, Y., M. Kitabatake, T. Yokogawa, K. Nishikawa, and H. Inokuchi. 1994. A tRNA-like structure is present in 10Sa RNA, a small stable RNA from Escherichia coli. Proc. Natl. Acad. Sci. USA 91:9223-9227.
-
(1994)
Proc. Natl. Acad. Sci. USA
, vol.91
, pp. 9223-9227
-
-
Komine, Y.1
Kitabatake, M.2
Yokogawa, T.3
Nishikawa, K.4
Inokuchi, H.5
-
24
-
-
0029015432
-
A developmentally regulated chromosomal origin of replication uses essential transcription elements
-
Marczynski, G. T., K. Lentine, and L. Shapiro. 1995. A developmentally regulated chromosomal origin of replication uses essential transcription elements. Genes Dev. 9:1543-1557.
-
(1995)
Genes Dev.
, vol.9
, pp. 1543-1557
-
-
Marczynski, G.T.1
Lentine, K.2
Shapiro, L.3
-
25
-
-
0025800215
-
10Sa RNA, a small stable RNA of Escherichia coli, is functional
-
Oh, B. K., and D. Apirion. 1991. 10Sa RNA, a small stable RNA of Escherichia coli, is functional. Mol. Gen. Genet. 229:52-56.
-
(1991)
Mol. Gen. Genet.
, vol.229
, pp. 52-56
-
-
Oh, B.K.1
Apirion, D.2
-
26
-
-
0030034983
-
Cell cycle control by an essential bacterial two-component signal transduction protein
-
Quon, K. C., G. T. Marczynski, and L. Shapiro. 1996. Cell cycle control by an essential bacterial two-component signal transduction protein. Cell 84: 83-93.
-
(1996)
Cell
, vol.84
, pp. 83-93
-
-
Quon, K.C.1
Marczynski, G.T.2
Shapiro, L.3
-
27
-
-
0031940593
-
Negative control of bacterial DNA replication by a cell cycle regulatory protein that binds at the chromosome origin
-
Quon, K. C., B. Yang, I. J. Domian, L. Shapiro, and G. T. Marczynski. 1998. Negative control of bacterial DNA replication by a cell cycle regulatory protein that binds at the chromosome origin. Proc. Natl. Acad. Sci. USA 95:120-125.
-
(1998)
Proc. Natl. Acad. Sci. USA
, vol.95
, pp. 120-125
-
-
Quon, K.C.1
Yang, B.2
Domian, I.J.3
Shapiro, L.4
Marczynski, G.T.5
-
28
-
-
0035964319
-
The tRNA function of SsrA contributes to controlling repression of bacteriophage Mu prophage
-
Ranquet C., J. Geiselmann, and A. Tonssaint. 2001. The tRNA function of SsrA contributes to controlling repression of bacteriophage Mu prophage. Proc. Natl. Acad. Sci. USA 98:10220-10225.
-
(2001)
Proc. Natl. Acad. Sci. USA
, vol.98
, pp. 10220-10225
-
-
Ranquet, C.1
Geiselmann, J.2
Tonssaint, A.3
-
29
-
-
0028215041
-
Role for 10Sa RNA in the growth of lambda-P22 hybrid phage
-
Retallack, D. M., L. L. Johnson, and D. I. Friedman. 1994. Role for 10Sa RNA in the growth of lambda-P22 hybrid phage. J. Bacteriol. 176:2082-2089.
-
(1994)
J. Bacteriol.
, vol.176
, pp. 2082-2089
-
-
Retallack, D.M.1
Johnson, L.L.2
Friedman, D.I.3
-
30
-
-
0035958905
-
Identification of endogenous SsrA-tagged proteins reveals tagging at positions corresponding to stop codons
-
Roche, E. D., and R. T. Sauer. 2001. Identification of endogenous SsrA-tagged proteins reveals tagging at positions corresponding to stop codons. J. Biol. Chem. 276:28509-28515.
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 28509-28515
-
-
Roche, E.D.1
Sauer, R.T.2
-
31
-
-
0033575660
-
SsrA-mediated peptide tagging caused by rare codons and tRNA scarcity
-
Roche, E. D., and R. T. Sauer. 1999. SsrA-mediated peptide tagging caused by rare codons and tRNA scarcity. EMBO J. 18:4579-4589.
-
(1999)
EMBO J.
, vol.18
, pp. 4579-4589
-
-
Roche, E.D.1
Sauer, R.T.2
-
32
-
-
0032840381
-
Aminoacylated tmRNA from Escherichia coli interacts with prokaryotic elongation factor Tu
-
Rudinger-Thirion, J., R. Giege, and B. Felden. 1999. Aminoacylated tmRNA from Escherichia coli interacts with prokaryotic elongation factor Tu. RNA 5:989-992.
-
(1999)
RNA
, vol.5
, pp. 989-992
-
-
Rudinger-Thirion, J.1
Giege, R.2
Felden, B.3
-
33
-
-
0004136246
-
-
Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
-
Sambrook, J., E. F. Fritsch, and T. Maniatis. 1989. Molecular cloning: a laboratory manual, 2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
-
(1989)
Molecular Cloning: A Laboratory Manual, 2nd Ed.
-
-
Sambrook, J.1
Fritsch, E.F.2
Maniatis, T.3
-
34
-
-
0028906813
-
C-terminal extension of truncated recombinant proteins in Escherichia coli with a 10Sa RNA decapeptide
-
Tu, G. F., G. E. Reid, J. G. Zhang, R. L. Moritz, and R. J. Simpson. 1995. C-terminal extension of truncated recombinant proteins in Escherichia coli with a 10Sa RNA decapeptide. J. Biol. Chem. 270:9322-9326.
-
(1995)
J. Biol. Chem.
, vol.270
, pp. 9322-9326
-
-
Tu, G.F.1
Reid, G.E.2
Zhang, J.G.3
Moritz, R.L.4
Simpson, R.J.5
-
35
-
-
0028170454
-
tRNA-like structures in 10Sa RNAs of Mycoplasma capricolum and Bacillus subtilis
-
Ushida, C., H. Himeno, T. Watanabe, and A. Muto. 1994. tRNA-like structures in 10Sa RNAs of Mycoplasma capricolum and Bacillus subtilis. Nucleic Acids Res. 22:3392-3396.
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 3392-3396
-
-
Ushida, C.1
Himeno, H.2
Watanabe, T.3
Muto, A.4
-
36
-
-
0034978976
-
SsrA-mediated tagging in Bacillus subtilis
-
Wiegert, T., and W. Schumann. 2001. SsrA-mediated tagging in Bacillus subtilis. J. Bacteriol. 183:3885-3889.
-
(2001)
J. Bacteriol.
, vol.183
, pp. 3885-3889
-
-
Wiegert, T.1
Schumann, W.2
-
37
-
-
0036084129
-
The tmRNA Website: Invasion by an intron
-
Williams, K. P. 2002. The tmRNA Website: invasion by an intron. Nucleic Acids Res. 30:179-182.
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. 179-182
-
-
Williams, K.P.1
-
38
-
-
0029118815
-
Use of flow cytometry to identify a Caulobacter 4.5S RNA temperature-sensitive mutant defective in the cell cycle
-
Winzeler, E., and L. Shapiro. 1995. Use of flow cytometry to identify a Caulobacter 4.5S RNA temperature-sensitive mutant defective in the cell cycle. J. Mol. Biol. 251:346-365.
-
(1995)
J. Mol. Biol.
, vol.251
, pp. 346-365
-
-
Winzeler, E.1
Shapiro, L.2
-
39
-
-
0032913245
-
Analysis of the role of trans-translation in the requirement of tmRNA forλimmP22 growth in Escherichia coli
-
Withey, J., and D. Friedman. 1999. Analysis of the role of trans-translation in the requirement of tmRNA forλimmP22 growth in Escherichia coli. J. Bacteriol. 181:2148-2157.
-
(1999)
J. Bacteriol.
, vol.181
, pp. 2148-2157
-
-
Withey, J.1
Friedman, D.2
-
40
-
-
0034423519
-
Binding and cross-linking of tmRNA to ribosomal protein S1, on and off the Escherichia coli ribosome
-
Wower, I. K., C. W. Zwieb, S. A. Guven, and J. Wower. 2000. Binding and cross-linking of tmRNA to ribosomal protein S1, on and off the Escherichia coli ribosome. EMBO J. 19:6612-6621.
-
(2000)
EMBO J.
, vol.19
, pp. 6612-6621
-
-
Wower, I.K.1
Zwieb, C.W.2
Guven, S.A.3
Wower, J.4
|