메뉴 건너뛰기




Volumn 185, Issue 1, 2003, Pages 254-261

The crystal structure of the phosphorylation domain in PhoP reveals a functional tandem association mediated by an asymmetric interface

Author keywords

[No Author keywords available]

Indexed keywords

OUTER MEMBRANE PROTEIN REGULATOR; PHOP PROTEIN; PROTEIN; PROTEIN DRRD; PROTEIN PHOB; UNCLASSIFIED DRUG;

EID: 0037215598     PISSN: 00219193     EISSN: None     Source Type: Journal    
DOI: 10.1128/JB.185.1.254-261.2003     Document Type: Article
Times cited : (46)

References (53)
  • 1
    • 0034745163 scopus 로고    scopus 로고
    • Genetic evidence that the α5 helix of the receiver domain of PhoB is involved in interdomain interactions
    • Allen, M. P., K. B. Zumbrennen, and W. R. McCleary. 2001. Genetic evidence that the α5 helix of the receiver domain of PhoB is involved in interdomain interactions. J. Bacteriol. 183:2204-2211.
    • (2001) J. Bacteriol. , vol.183 , pp. 2204-2211
    • Allen, M.P.1    Zumbrennen, K.B.2    McCleary, W.R.3
  • 4
    • 0036583638 scopus 로고    scopus 로고
    • Tandem DNA recognition by PhoB, a two-component signal transduction transcriptional activator
    • Blanco, A. G., M. Sola, F. X. Gomis-Rüth, and M. Coll. 2002. Tandem DNA recognition by PhoB, a two-component signal transduction transcriptional activator. Structure 10:701-713.
    • (2002) Structure , vol.10 , pp. 701-713
    • Blanco, A.G.1    Sola, M.2    Gomis-Rüth, F.X.3    Coll, M.4
  • 5
    • 0036134775 scopus 로고    scopus 로고
    • Bright lights, abundant operons-fluorescence and genomic technologies advance studies of bacterial locomotion and signal transduction: Review of the BLAST meeting, Cuernavaca, Mexico, 14 to 19 January 2001
    • Bourret, R. B., N. W. Charon, A. M. Stock, and A. H. West. 2002. Bright lights, abundant operons-fluorescence and genomic technologies advance studies of bacterial locomotion and signal transduction: Review of the BLAST meeting, Cuernavaca, Mexico, 14 to 19 January 2001 J. Bacteriol. 184:1-17.
    • (2002) J. Bacteriol. , vol.184 , pp. 1-17
    • Bourret, R.B.1    Charon, N.W.2    Stock, A.M.3    West, A.H.4
  • 7
    • 0036174746 scopus 로고    scopus 로고
    • Evidence of intradomain and interdomain flexibility in an OmpR/PhoB homolog from Thermotoga maritima
    • Buckler, D. R., Y. Zhou, and A. M. Stock. 2002. Evidence of intradomain and interdomain flexibility in an OmpR/PhoB homolog from Thermotoga maritima. Structure 10:153-164.
    • (2002) Structure , vol.10 , pp. 153-164
    • Buckler, D.R.1    Zhou, Y.2    Stock, A.M.3
  • 8
    • 0032119131 scopus 로고    scopus 로고
    • The two-component system: Regulation of diverse signaling pathways in prokaryotes and eukaryotes
    • Chang, C., and R. C. Stewart. 1998. The two-component system: Regulation of diverse signaling pathways in prokaryotes and eukaryotes Plant Physiol. 117:723-731.
    • (1998) Plant Physiol. , vol.117 , pp. 723-731
    • Chang, C.1    Stewart, R.C.2
  • 9
    • 0037215521 scopus 로고    scopus 로고
    • Residue R113 is essential for PhoP dimerization and function: A residue buried in the asymmetric PhoP dimer interface determined in the PhoPN three-dimensional crystal structure
    • Chen, Y., C. Birck, J.-P. Samama, and F. M. Hulett. 2003. Residue R113 is essential for PhoP dimerization and function: A residue buried in the asymmetric PhoP dimer interface determined in the PhoPN three-dimensional crystal structure. J. Bacteriol. 185:262-273.
    • (2003) J. Bacteriol. , vol.185 , pp. 262-273
    • Chen, Y.1    Birck, C.2    Samama, J.-P.3    Hulett, F.M.4
  • 11
    • 0028103275 scopus 로고
    • The CCP4 suite: Programs for protein crystallography
    • Collaborative Computational Project Number 4. 1994. The CCP4 suite: programs for protein crystallography. Acta Crystallogr. Sect. D 50:760-763.
    • (1994) Acta Crystallogr. Sect. D , vol.50 , pp. 760-763
  • 13
    • 0032539671 scopus 로고    scopus 로고
    • Structural basis for methylesterase CheB regulation by a phosphorylation-activated domain
    • Djordjevic, S., P. N. Goudreau, Q. Xu, A. M. Stock, and A. H. West. 1998. Structural basis for methylesterase CheB regulation by a phosphorylation-activated domain. Proc. Natl. Acad. Sci. USA 95:1381-1386.
    • (1998) Proc. Natl. Acad. Sci. USA , vol.95 , pp. 1381-1386
    • Djordjevic, S.1    Goudreau, P.N.2    Xu, Q.3    Stock, A.M.4    West, A.H.5
  • 14
    • 0032455047 scopus 로고    scopus 로고
    • Structural analysis of bacterial chemotaxis proteins: Components of a dynamic signaling system
    • Djordjevic, S., and A. M. Stock. 1998. Structural analysis of bacterial chemotaxis proteins: Components of a dynamic signaling system. J. Struct. Biol. 124:189-200.
    • (1998) J. Struct. Biol. , vol.124 , pp. 189-200
    • Djordjevic, S.1    Stock, A.M.2
  • 15
    • 0032911194 scopus 로고    scopus 로고
    • Mutational analysis of the phoD promoter in Bacillus subtilis: Implications for PhoP binding and promoter activation of Pho regulon promoters
    • Eder, S., W. Liu, and F. M. Hulett. 1999. Mutational analysis of the phoD promoter in Bacillus subtilis: Implications for PhoP binding and promoter activation of Pho regulon promoters. J. Bacteriol. 181:2017-2025.
    • (1999) J. Bacteriol. , vol.181 , pp. 2017-2025
    • Eder, S.1    Liu, W.2    Hulett, F.M.3
  • 16
    • 0032911313 scopus 로고    scopus 로고
    • Two-component signal transduction in Bacillus subtilis: How one organism sees its world
    • Fabret, C., V. A. Feher, and J. A. Hoch. 1999. Two-component signal transduction in Bacillus subtilis: How one organism sees its world. J. Bacteriol. 181:1975-1983.
    • (1999) J. Bacteriol. , vol.181 , pp. 1975-1983
    • Fabret, C.1    Feher, V.A.2    Hoch, J.A.3
  • 17
    • 0031757758 scopus 로고    scopus 로고
    • A two-component signal transduction system essential for growth of Bacillus subtilis: Implications for anti-infective therapy
    • Fabret, C., and J. A. Hoch. 1998. A two-component signal transduction system essential for growth of Bacillus subtilis: implications for anti-infective therapy. J. Bacteriol. 180:6375-6383.
    • (1998) J. Bacteriol. , vol.180 , pp. 6375-6383
    • Fabret, C.1    Hoch, J.A.2
  • 18
    • 0028982719 scopus 로고
    • 1H, 15N, and 13C backbone chemical shift assignments, secondary structure, and magnesium-binding characteristics of the Bacillus subtilis response regulator, Spo0F, determined by heteronuclear high-resolution
    • Feher, V. A., J. W. Zapf, J. A. Hoch, F. W. Dahlquist, J. M. Whiteley, and J. Cavanagh. 1995. 1H, 15N, and 13C backbone chemical shift assignments, secondary structure, and magnesium-binding characteristics of the Bacillus subtilis response regulator, Spo0F, determined by heteronuclear high-resolution. NMR Protein Sci. 4:1801-1814.
    • (1995) NMR Protein Sci. , vol.4 , pp. 1801-1814
    • Feher, V.A.1    Zapf, J.W.2    Hoch, J.A.3    Dahlquist, F.W.4    Whiteley, J.M.5    Cavanagh, J.6
  • 20
    • 0034624879 scopus 로고    scopus 로고
    • The 1.9 Å resolution crystal structure of phosphono-CheY, an analogue of the active form of the response regulator, CheY
    • Halkides, C. J., M. M. McEvoy, E. Casper, P. Matsumura, K. Volz, and F. W. Dahlquist. 2000. The 1.9 Å resolution crystal structure of phosphono-CheY, an analogue of the active form of the response regulator, CheY. Biochemistry 39:5280-5286.
    • (2000) Biochemistry , vol.39 , pp. 5280-5286
    • Halkides, C.J.1    McEvoy, M.M.2    Casper, E.3    Matsumura, P.4    Volz, K.5    Dahlquist, F.W.6
  • 21
    • 0025262173 scopus 로고
    • Selenomethionyl proteins produced for analysis by multiwavelength anomalous diffraction (MAD): A vehicle for direct determination of three-dimensional structure
    • Hendrickson, W. A., J. R. Horton, and D. M. LeMaster. 1990. Selenomethionyl proteins produced for analysis by multiwavelength anomalous diffraction (MAD): A vehicle for direct determination of three-dimensional structure. EMBO J. 9:1665-1672.
    • (1990) EMBO J. , vol.9 , pp. 1665-1672
    • Hendrickson, W.A.1    Horton, J.R.2    LeMaster, D.M.3
  • 22
    • 0002220177 scopus 로고    scopus 로고
    • The Pho regulon
    • A. L. Sonenshein, J. A. Hoch, and R. Losick (ed.). ASM Press, Washington, D.C.
    • Hulett, F. M. 2002. The Pho regulon, p. 193-201. In A. L. Sonenshein, J. A. Hoch, and R. Losick (ed.), Bacillus Subtilis and Its Closest Relatives: From Genes to Cells. ASM Press, Washington, D.C.
    • (2002) Bacillus Subtilis and Its Closest Relatives: From Genes to Cells , pp. 193-201
    • Hulett, F.M.1
  • 24
    • 0035045954 scopus 로고    scopus 로고
    • The OmpR-family of proteins: Insight into the tertiary structure and functions of two-component regulator proteins
    • Itou, H., and I. Tanaka. 2001. The OmpR-family of proteins: insight into the tertiary structure and functions of two-component regulator proteins. J. Biochem. 129:343-350.
    • (2001) J. Biochem. , vol.129 , pp. 343-350
    • Itou, H.1    Tanaka, I.2
  • 25
    • 0026206788 scopus 로고
    • Sparse matrix sampling: A screening method for crystallization of proteins
    • Jancarik, J., and S. H. Kim. 1991. Sparse matrix sampling: A screening method for crystallization of proteins. J. Appl. Crystallogr. 24:409-411.
    • (1991) J. Appl. Crystallogr. , vol.24 , pp. 409-411
    • Jancarik, J.1    Kim, S.H.2
  • 26
    • 0035798619 scopus 로고    scopus 로고
    • Multimerization of phosphorylated and non-phosphorylated ArcA is necessary for the response regulator function of the Arc two-component signal transduction system
    • Jeon, Y., Y. S. Lee, J. S. Han, J. B. Kim, and D. S. Hwang. 2001. Multimerization of phosphorylated and non-phosphorylated ArcA is necessary for the response regulator function of the Arc two-component signal transduction system. J. Biol. Chem. 276:40873-40879.
    • (2001) J. Biol. Chem. , vol.276 , pp. 40873-40879
    • Jeon, Y.1    Lee, Y.S.2    Han, J.S.3    Kim, J.B.4    Hwang, D.S.5
  • 27
    • 0031007417 scopus 로고    scopus 로고
    • Uncoupled phosphorylation and activation in bacterial chemotaxis. The 2.3 A structure of an aspartate to lysine mutant at position 13 of CheY
    • Jiang, M., R. B. Bourret, M. I. Simon, and K. Volz. 1997. Uncoupled phosphorylation and activation in bacterial chemotaxis. The 2.3 A structure of an aspartate to lysine mutant at position 13 of CheY. J. Biol. Chem. 272:11850-11855.
    • (1997) J. Biol. Chem. , vol.272 , pp. 11850-11855
    • Jiang, M.1    Bourret, R.B.2    Simon, M.I.3    Volz, K.4
  • 28
    • 0033599026 scopus 로고    scopus 로고
    • Structure of a transiently phosphorylated switch in bacterial signal transduction
    • Kern, D., B. F. Volkman, P. Luginbuhl, M. J. Nohaile, S. Kustu, and D. E. Wemmer. 1999. Structure of a transiently phosphorylated switch in bacterial signal transduction. Nature 40:894-898.
    • (1999) Nature , vol.40 , pp. 894-898
    • Kern, D.1    Volkman, B.F.2    Luginbuhl, P.3    Nohaile, M.J.4    Kustu, S.5    Wemmer, D.E.6
  • 29
    • 0031027087 scopus 로고    scopus 로고
    • Escherichia coli positive regulator OmpR has a large loop structure at the putative RNA polymerase interaction site
    • Kondo, H., A. Nakagawa, J. Nishihira, Y. Nishimura, T. Mizuno, and I. Tanaka. 1997. Escherichia coli positive regulator OmpR has a large loop structure at the putative RNA polymerase interaction site. Nat. Struct. Biol. 4:28-31.
    • (1997) Nat. Struct. Biol. , vol.4 , pp. 28-31
    • Kondo, H.1    Nakagawa, A.2    Nishihira, J.3    Nishimura, Y.4    Mizuno, T.5    Tanaka, I.6
  • 30
    • 0000243829 scopus 로고
    • PROCHECK: A program to check the stereochemical quality of protein structures
    • Laskowski, R. A., M. W. MacArthur, D. S. Moss, and J. M. Thornton. 1993. PROCHECK: A program to check the stereochemical quality of protein structures. J. Appl. Crystallogr. 26:283-291.
    • (1993) J. Appl. Crystallogr. , vol.26 , pp. 283-291
    • Laskowski, R.A.1    MacArthur, M.W.2    Moss, D.S.3    Thornton, J.M.4
  • 31
  • 35
    • 0031912067 scopus 로고    scopus 로고
    • Analysis of Bacillus subtilis tagAB and tagDEF expression during phosphate starvation identifies a repressor role for PhoP∼P
    • Liu, W., S. Eder, and F. M. Hulett. 1998. Analysis of Bacillus subtilis tagAB and tagDEF expression during phosphate starvation identifies a repressor role for PhoP∼P. J. Bacteriol. 180:753-758.
    • (1998) J. Bacteriol. , vol.180 , pp. 753-758
    • Liu, W.1    Eder, S.2    Hulett, F.M.3
  • 36
    • 0030809030 scopus 로고    scopus 로고
    • Bacillus subtilis PhoP binds to the phoB tandem promoter exclusively within the phosphate starvation-inducible promoter
    • Liu, W., and F. M. Hulett. 1997. Bacillus subtilis PhoP binds to the phoB tandem promoter exclusively within the phosphate starvation-inducible promoter. J. Bacteriol. 179:6302-6310.
    • (1997) J. Bacteriol. , vol.179 , pp. 6302-6310
    • Liu, W.1    Hulett, F.M.2
  • 37
    • 0030660409 scopus 로고    scopus 로고
    • A response regulatory protein with the site of phosphorylation blocked by an arginine interaction: Crystal structure of Spo0F from Bacillus subtilis
    • Madhusudan, M., J. Zapf, J. A. Hoch, J. M. Whiteley, N. H. Xuong, and K. I. Varughese. 1997. A response regulatory protein with the site of phosphorylation blocked by an arginine interaction: Crystal structure of Spo0F from Bacillus subtilis. Biochemistry 36:12739-12745.
    • (1997) Biochemistry , vol.36 , pp. 12739-12745
    • Madhusudan, M.1    Zapf, J.2    Hoch, J.A.3    Whiteley, J.M.4    Xuong, N.H.5    Varughese, K.I.6
  • 38
    • 0031568318 scopus 로고    scopus 로고
    • The DNA-binding domain of OmpR: Crystal structures of a winged helix transcription factor
    • Martinez-Hackert, E., and A. M. Stock. 1997. The DNA-binding domain of OmpR: Crystal structures of a winged helix transcription factor. Structure 5:109-124.
    • (1997) Structure , vol.5 , pp. 109-124
    • Martinez-Hackert, E.1    Stock, A.M.2
  • 39
    • 0029931125 scopus 로고    scopus 로고
    • Structure and dynamics of a CheY-binding domain of the chemotaxis kinase CheA determined by nuclear magnetic resonance spectroscopy
    • McEvoy, M. M., D. R. Muhandiram, L. E. Kay, and F. W. Dahlquist. 1996. Structure and dynamics of a CheY-binding domain of the chemotaxis kinase CheA determined by nuclear magnetic resonance spectroscopy. Biochemistry 35:5633-5640.
    • (1996) Biochemistry , vol.35 , pp. 5633-5640
    • McEvoy, M.M.1    Muhandiram, D.R.2    Kay, L.E.3    Dahlquist, F.W.4
  • 40
    • 0028851794 scopus 로고
    • Nuclear magnetic resonance assignments and global fold of a CheY-binding domain in CheA, the chemotaxis-specific kinase of Escherichia coli
    • McEvoy, M. M., H. Zhou, A. F. Roth, D. F. Lowry, T. B. Morrison, L. E. Kay, and F. W. Dahlquist. 1995. Nuclear magnetic resonance assignments and global fold of a CheY-binding domain in CheA, the chemotaxis-specific kinase of Escherichia coli. Biochemistry 34:13871-13880.
    • (1995) Biochemistry , vol.34 , pp. 13871-13880
    • McEvoy, M.M.1    Zhou, H.2    Roth, A.F.3    Lowry, D.F.4    Morrison, T.B.5    Kay, L.E.6    Dahlquist, F.W.7
  • 41
    • 0033573130 scopus 로고    scopus 로고
    • The structure of the signal receiver domain of the Arabidopsis thaliana ethylene receptor ETR1
    • Müller-Dieckmann, H.-J., A. A. Grantz, and S.-H. Kim. 1999. The structure of the signal receiver domain of the Arabidopsis thaliana ethylene receptor ETR1. Structure 7:1547-1556.
    • (1999) Structure , vol.7 , pp. 1547-1556
    • Müller-Dieckmann, H.-J.1    Grantz, A.A.2    Kim, S.-H.3
  • 42
    • 0030924992 scopus 로고    scopus 로고
    • Refinement of macromolecular structures by the maximum-likelihood method
    • Murshudov, G. N., A. A. Vagin, and E. J. Dodson. 1997. Refinement of macromolecular structures by the maximum-likelihood method. Acta Crystallogr. Sect. D 53:240-255.
    • (1997) Acta Crystallogr. Sect. D , vol.53 , pp. 240-255
    • Murshudov, G.N.1    Vagin, A.A.2    Dodson, E.J.3
  • 43
    • 0025735862 scopus 로고
    • Signal transduction and osmoregulation in Escherichia coli. A novel type of mutation in the phosphorylation domain of the activator protein, OmpR, results in a defect in its phosphorylation-dependent DNA binding
    • Nakashima, K., K. Kanamaru, H. Aiba, and T. Mizuno. 1991. Signal transduction and osmoregulation in Escherichia coli. A novel type of mutation in the phosphorylation domain of the activator protein, OmpR, results in a defect in its phosphorylation-dependent DNA binding. J. Biol. Chem. 266:10775-10780.
    • (1991) J. Biol. Chem. , vol.266 , pp. 10775-10780
    • Nakashima, K.1    Kanamaru, K.2    Aiba, H.3    Mizuno, T.4
  • 44
    • 84920325457 scopus 로고
    • AMoRe: An automated package for molecular replacement
    • Navaza, J. 1994. AMoRe: An automated package for molecular replacement. Acta Crystallogr. Sect. A 50:157-163.
    • (1994) Acta Crystallogr. Sect. A , vol.50 , pp. 157-163
    • Navaza, J.1
  • 45
    • 0034602919 scopus 로고    scopus 로고
    • Structural comparison of the PhoB and OmpR DNA-binding/transactivation domains and the arrangement of PhoB molecules on the phosphate box
    • Okamura, H., S. Hanaoka, A. Nagadoi, K. Makino, and Y. Nishimura. 2000. Structural comparison of the PhoB and OmpR DNA-binding/transactivation domains and the arrangement of PhoB molecules on the phosphate box. J. Mol. Biol. 295:1225-1236.
    • (2000) J. Mol. Biol. , vol.295 , pp. 1225-1236
    • Okamura, H.1    Hanaoka, S.2    Nagadoi, A.3    Makino, K.4    Nishimura, Y.5
  • 46
    • 0032212015 scopus 로고    scopus 로고
    • Incorporation of prior phase information strengthens maximum-likelihood structure refinement
    • Pannu, N. J., G. N. Murshudov, E. J. Dodson, and A. Read. 1998. Incorporation of prior phase information strengthens maximum-likelihood structure refinement. Acta Crystallogr. Sect. D 54:1285-1294.
    • (1998) Acta Crystallogr. Sect. D , vol.54 , pp. 1285-1294
    • Pannu, N.J.1    Murshudov, G.N.2    Dodson, E.J.3    Read, A.4
  • 47
    • 0032964481 scopus 로고    scopus 로고
    • Automated protein model building combined with iterative structure refinement
    • Perrakis, A., R. Morris, and V. S. Lamzin. 1999. Automated protein model building combined with iterative structure refinement. Nat. Struct. Biol. 6:458-463.
    • (1999) Nat. Struct. Biol. , vol.6 , pp. 458-463
    • Perrakis, A.1    Morris, R.2    Lamzin, V.S.3
  • 48
    • 0344142378 scopus 로고    scopus 로고
    • Three-dimensional crystal structure of the transcription factor PhoB receiver domain
    • Solà, M., F. Gomis, L. Serrano, A. Gonzalez, and M. Coll. 1999. Three-dimensional crystal structure of the transcription factor PhoB receiver domain. J. Mol. Biol. 285:675-687.
    • (1999) J. Mol. Biol. , vol.285 , pp. 675-687
    • Solà, M.1    Gomis, F.2    Serrano, L.3    Gonzalez, A.4    Coll, M.5
  • 49
    • 0027788051 scopus 로고
    • Structure of the Mg(2+)-bound form of CheY and mechanism of phosphoryl transfer in bacterial chemotaxis
    • Stock, A. M., E. Martinez-Hackert, B. F. Rasmussen, A. H. West, J. B. Stock, D. Ringe, and G. A. Petsko. 1993. Structure of the Mg(2+)-bound form of CheY and mechanism of phosphoryl transfer in bacterial chemotaxis. Biochemistry 32:13375-13380.
    • (1993) Biochemistry , vol.32 , pp. 13375-13380
    • Stock, A.M.1    Martinez-Hackert, E.2    Rasmussen, B.F.3    West, A.H.4    Stock, J.B.5    Ringe, D.6    Petsko, G.A.7
  • 51
    • 0028927334 scopus 로고
    • Three-dimensional solution structure of the N-terminal receiver domain of NTRC
    • Volkman, B. F., M. J. Nohaile, N. K. Amy, S. Kustu, and D. E. Wemmer. 1995. Three-dimensional solution structure of the N-terminal receiver domain of NTRC. Biochemistry 34:1413-1424.
    • (1995) Biochemistry , vol.34 , pp. 1413-1424
    • Volkman, B.F.1    Nohaile, M.J.2    Amy, N.K.3    Kustu, S.4    Wemmer, D.E.5
  • 52
    • 0025741662 scopus 로고
    • Crystal structure of Escherichia coli CheY refined at 1.7-A resolution
    • Volz, K., and P. Matsumura. 1991. Crystal structure of Escherichia coli CheY refined at 1.7-A resolution. J. Biol. Chem. 266:15511-15519.
    • (1991) J. Biol. Chem. , vol.266 , pp. 15511-15519
    • Volz, K.1    Matsumura, P.2
  • 53
    • 0031975752 scopus 로고    scopus 로고
    • Structure of the CheY-binding domain of histidine kinase CheA in complex with CheY
    • Welch, M., N. Chinardet, L. Mourey, C. Birck, and J. P. Samama. 1998. Structure of the CheY-binding domain of histidine kinase CheA in complex with CheY. Nat. Struct. Biol. 5:25-29.
    • (1998) Nat. Struct. Biol. , vol.5 , pp. 25-29
    • Welch, M.1    Chinardet, N.2    Mourey, L.3    Birck, C.4    Samama, J.P.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.