SCOPUS 정보 검색 플랫폼

Journal of Computational Chemistry

Volumn 23, Issue 9, 2002, Pages 861-869

Extracting hydration sites around proteins from explicit water simulations

(2) Henchman, Richard H a McCammon, J Andrew a

a UNIVERSITY OF CALIFORNIA (United States)

Author keywords

Hydration site; Molecular dynamics; Protein hydration; Solvation; Water structure

Indexed keywords

COMPUTER SIMULATION; HYDRATION; MOLECULAR DYNAMICS; MOLECULAR STRUCTURE; MOLECULES; WATER;

SOLVATION; WATER DENSITY;

PROTEINS;

PROTEIN; WATER;

ALGORITHM; ARTICLE; BINDING SITE; CHEMICAL MODEL; CHEMISTRY; COMPUTER SIMULATION; METHODOLOGY; PHYSICAL CHEMISTRY; PROTEIN CONFORMATION; TIME; X RAY CRYSTALLOGRAPHY;

ALGORITHMS; BINDING SITES; CHEMISTRY, PHYSICAL; COMPUTER SIMULATION; CRYSTALLOGRAPHY, X-RAY; MODELS, CHEMICAL; PROTEIN CONFORMATION; PROTEINS; TIME FACTORS; WATER;

EID: 0037098857 PISSN: 01928651 EISSN: None Source Type: Journal
DOI: 10.1002/jcc.10074 Document Type: Article

Times cited : (71)

References (40)

1
- 0004084360
- CRC Press: Boca Raton, FL
- (1993) Water and Biological Macromolecules
- Westhof, E.¹

2
- 0025877453
- (1991) Adv Protein Chem , vol.41 , pp. 37
- Rupley, J.A.¹ Careri, G.²

3
- 0025896727
- (1991) Annu Rev Biophys Biol , vol.20 , pp. 577
- Teeter, M.M.¹

4
- 0033012840
- (1999) Nat Struct Biol , vol.6 , pp. 253
- Denisov, V.P.¹ Jonsson, B.H.² Halle, B.³

5
- 0003927323
- University Press: Cambridge
- (1987) Dynamics of Proteins and Nucleic Acids
- McCammon, J.A.¹ Harvey, S.C.²

6
- 0024094768
- (1988) Proc Natl Acad Sci USA , vol.85 , pp. 7557
- Levitt, M.¹ Sharon, R.²

7
- 0024354001
- (1989) J Mol Biol , vol.208 , pp. 159
- Brooks C.L. III¹ Karplus, M.²

8
- 0027918556
- (1993) Structure , vol.1 , pp. 223
- Levitt, M.¹ Park, B.H.²

9
- 0028097538
- (1994) Curr Opin Struct Biol , vol.4 , pp. 770
- Karplus, P.A.¹ Faerman, C.²

10
- 0022485951
- (1986) Methods Enzymol , vol.127 , pp. 162
- Savage, H.¹ Wlodawer, A.²

11
- 0029421613
- (1995) Prog Biophys Mol Biol , vol.64 , pp. 105
- Schoenborn, B.P.¹ Garcia, A.² Knott, R.³

12
- 0033081137
- (1999) Acta Crystallogr , vol.D55 , pp. 479
- Carugo, O.¹ Bordo, D.²

13
- 33845551710
- (1983) J Phys Chem , vol.87 , pp. 5071
- Impey, R.W.¹ Madden, P.A.² McDonald, I.R.³

14
- 0022462967
- (1986) Methods Enzymol , vol.127 , pp. 21
- Mezei, M.¹ Beveridge, D.L.²

15
- 0028218493
- (1994) Biophys J , vol.66 , pp. 601
- Lounnas, V.¹ Pettitt, B.M.² Phillips, G.N.³

16
- 0028144626
- (1994) Proteins , vol.18 , pp. 133
- Lounnas, V.¹ Pettitt, B.M.²

17
- 0027304152
- (1993) J Mol Biol , vol.231 , pp. 1040
- Brunne, R.¹ Liepinsh, E.² Otting, G.³ Wuthrich, K.⁴ Van Gunsteren, W.F.⁵

18
- 0001520216
- (1993) J Comput Chem , vol.14 , pp. 1396
- Garcia, A.E.¹ Stiller, L.²

19
- 0001518952
- (1995) J Phys Chem , vol.99 , pp. 1371
- Muegge, I.¹ Knapp, E.W.²

20
- 0030057862
- (1996) Proteins , vol.25 , pp. 366
- Abseher, R.¹ Schreiber, H.² Steinhauser, O.³

21
- 0032104775
- (1998) Biopolymers , vol.45 , pp. 469
- Makarov, V.A.¹ Andrews, B.K.² Pettitt, B.M.³

22
- 0034257122
- (2000) Proteins , vol.40 , pp. 193
- Higo, J.¹ Kono, H.² Nakamura, H.³ Sarai, A.⁴

23
- 0033636839
- (2000) Biophys J , vol.79 , pp. 2966
- Makarov, V.A.¹ Andrews, B.K.² Smith, P.E.³ Pettitt, B.⁴

24
- 0033995767
- (2000) Proteins , vol.39 , pp. 56
- Luise, A.¹ Falconi, M.² Desideri, A.³

25
- 0034651984
- (2000) Proteins , vol.38 , pp. 261
- Garcia, A.E.¹ Hummer, G.²

26
- 0035839052
- (2001) J Mol Biol , vol.311 , pp. 409
- Sterpone, F.¹ Ceccarelli, M.² Marchi, M.³

27
- 0033007964
- (1999) Biophys Chem , vol.78 , pp. 97
- Liu, Y.¹ Ichiye, T.²

28
- 0034906622
- (2001) Biophys J , vol.81 , pp. 715
- Tai, K.¹ Shen, T.² Börjesson, U.³ Philippopoulos, M.⁴ McCammon, J.A.⁵

29
- 0028174977
- (1994) Annu Rev Pharmacol Toxicol , vol.34 , pp. 281
- Taylor, P.¹ Radić, Z.²

30
- 0034681279
- (2000) J Mol Biol , vol.296 , pp. 713
- Koellner, G.¹ Kryger, G.² Millard, C.B.³ Silman, I.⁴ Sussman, J.L.⁵ Steiner, T.⁶

31
- 0033033411
- (1999) Biopolymers , vol.50 , pp. 35
- Tara, S.¹ Straatsma, T.P.² McCammon, J.A.³

32
- 0028818897
- (1995) Cell , vol.83 , pp. 503
- Bourne, Y.¹ Taylor, P.² Marchot, P.³

33
- 0021871375
- (1985) J Med Chem , vol.28 , pp. 849
- Goodford, P.J.¹

34
- 0034625283
- (2000) Comp Phys Commun , vol.128 , pp. 377
- Straatsma, T.P.¹ Philippopoulos, M.² McCammon, J.A.³

35
- 0029011701
- (1995) J Am Chem Soc , vol.117 , pp. 5179
- Cornell, W.D.¹ Cieplak, P.² Bayly, C.I.³ Gould, I.R.⁴ Merz, K.M.⁵ Ferguson, D.M.⁶ Spellmeyer, D.C.⁷ Fox, T.⁸ Caldwell, J.W.⁹ Kollman, P.A.¹⁰

36
- 33846823909
- (1993) J Chem Phys , vol.98 , pp. 10089
- Darden, T.¹ York, D.² Pedersen, L.³

37
- 33646940952
- (1977) J Comput Phys , vol.23 , pp. 327
- Ryckaert, J.-P.¹ Ciccotti, G.² Berendsen, H.J.C.³

38
- 33750587438
- (1984) J Chem Phys , vol.81 , pp. 3684
- Berendsen, H.J.C.¹ Postma, J.P.M.² Van Gunsteren, W.F.³ Di Nola, A.⁴ Haak, J.R.⁵

39
- 0027957222
- (1994) Proteins , vol.18 , pp. 148
- Lounnas, V.¹ Pettitt, B.M.²

40
- 0009510507
- Private communication
- Marchot, P.¹ Bourne, Y.²

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