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Volumn 106, Issue 6, 2002, Pages 1481-1485

Thermodynamics of an all-atom off-lattice model of the fragment B of Staphylococcal protein A: Implication for the origin of the cooperativity of protein folding

(2) Zhou, Yaoqi a Linhananta, Apichart a

a UNIVERSITY AT BUFFALO (United States)

Author keywords

[No Author keywords available]

Indexed keywords

PROTEIN FOLDING;

COMPUTER SIMULATION; FREE ENERGY; MATHEMATICAL MODELS; NUCLEAR MAGNETIC RESONANCE; PERMITTIVITY; SOLVENTS; THERMODYNAMICS;

PROTEINS;

EID: 0037075457 PISSN: 10895647 EISSN: None Source Type: Journal
DOI: 10.1021/jp013824r Document Type: Article

Times cited : (26)

References (48)

1
- 0018588511
- Privalov, P.L. Adv. Protein Chem. 1979, 33, 167-241.
- (1979) Adv. Protein Chem. , vol.33 , pp. 167-241
- Privalov, P.L.¹

2
- 0029124248
- Ptitsyn, O.B. Adv. Protein Chem. 1995, 47, 83-230.
- (1995) Adv. Protein Chem. , vol.47 , pp. 83-230
- Ptitsyn, O.B.¹

3
- 0003517850
- Academic Press: New York
- Poland, D.C.; Scheraga, H.A. Theory of Helix-Coil Transitions in Biopolymers; Statistical Mechanical Theory of Order-Disorder Transitions in Biological Macromolecules; Academic Press: New York, 1970.
- (1970) Theory of Helix-Coil Transitions in Biopolymers; Statistical Mechanical Theory of Order-Disorder Transitions in Biological Macromolecules
- Poland, D.C.¹ Scheraga, H.A.²

4
- 0022423920
- Dill, K.A. Biochemistry 1985, 24, 1501-1509.
- (1985) Biochemistry , vol.24 , pp. 1501-1509
- Dill, K.A.¹

5
- 0029653906
- Chan, H.S.; Bromberg, S.; Dill, K.A. Philos. Trans. R. Soc. London B 1995, 348, 61-70.
- (1995) Philos. Trans. R. Soc. London B , vol.348 , pp. 61-70
- Chan, H.S.¹ Bromberg, S.² Dill, K.A.³

6
- 0024742246
- Shakhnovich, E.I.; Finkelstein, A.V. Biopolymers 1989, 28, 1667-1680.
- (1989) Biopolymers , vol.28 , pp. 1667-1680
- Shakhnovich, E.I.¹ Finkelstein, A.V.²

7
- 0026756702
- Murphy, K.P.; Freire, E. Adv. Protein Chem. 1992, 43, 313-361.
- (1992) Adv. Protein Chem. , vol.43 , pp. 313-361
- Murphy, K.P.¹ Freire, E.²

8
- 0029809182
- Kolinski, A.; Galazka, W.; Skolnick, J. Proteins 1996, 26, 271-287.
- (1996) Proteins , vol.26 , pp. 271-287
- Kolinski, A.¹ Galazka, W.² Skolnick, J.³

9
- 0034310589
- Kaya, H.; Chan, H.S. Phys. Rev. Lett. 2000, 85, 4823-4826.
- (2000) Phys. Rev. Lett. , vol.85 , pp. 4823-4826
- Kaya, H.¹ Chan, H.S.²

10
- 0032502803
- Hao, M.H.; Scheraga, H.A. J. Mol. Biol. 1998, 277, 973-983.
- (1998) J. Mol. Biol. , vol.277 , pp. 973-983
- Hao, M.H.¹ Scheraga, H.A.²

11
- 0031475159
- Zhou, Y.; Karplus, M. Proc. Natl. Acad. Sci. U.S.A. 1997, 94, 14 429-14 432.
- (1997) Proc. Natl. Acad. Sci. U.S.A. , vol.94 , pp. 14429-14432
- Zhou, Y.¹ Karplus, M.²

12
- 0033527768
- Zhou, Y.; Karplus, M. J. Mol. Biol. 1999b, 293, 917-951.
- (1999) J. Mol. Biol. , vol.293 , pp. 917-951
- Zhou, Y.¹ Karplus, M.²

13
- 0033598375
- Zhou, Y.; Karplus, M. Nature 1999a, 401, 400-403.
- (1999) Nature , vol.401 , pp. 400-403
- Zhou, Y.¹ Karplus, M.²

14
- 0032539684
- Pande, V.S.; Rokhsar, D.S. Proc. Natl. Acad. Sci. U.S.A. 1998, 95, 1490-1494.
- (1998) Proc. Natl. Acad. Sci. U.S.A. , vol.95 , pp. 1490-1494
- Pande, V.S.¹ Rokhsar, D.S.²

15
- 0002689652
- Guo, Z.Y.; Brooks, III, C.L., Biopolymers 1997, 42, 745-757.
- (1997) Biopolymers , vol.42 , pp. 745-757
- Guo, Z.Y.¹ Brooks C.L. III²

16
- 84986512474
- Brooks, B.R.; Bruccoleri, R.E.; Olafson, B.D.; States, D.J.; Swaminathan, S.; Karplus, M. J. Comput. Chem. 1983, 4, 187-217.
- (1983) J. Comput. Chem. , vol.4 , pp. 187-217
- Brooks, B.R.¹ Bruccoleri, R.E.² Olafson, B.D.³ States, D.J.⁴ Swaminathan, S.⁵ Karplus, M.⁶

17
- 0017776823
- McCammon, J.A.; Gelin, B.R.; Karplus, M. Nature 1977, 267, 585-590.
- (1977) Nature , vol.267 , pp. 585-590
- McCammon, J.A.¹ Gelin, B.R.² Karplus, M.³

18
- 0029151245
- Boczko, E.M.; Brooks, C.L., III Science 1995, 269, 393-396.
- (1995) Science , vol.269 , pp. 393-396
- Boczko, E.M.¹ Brooks C.L. III²

19
- 0027195207
- Cedergren, L.; Andersson, R.; Jansson, B.; Uhlen, M.; Nilsson, B. Prot. Eng. 1993, 6, 441-448.
- (1993) Prot. Eng. , vol.6 , pp. 441-448
- Cedergren, L.¹ Andersson, R.² Jansson, B.³ Uhlen, M.⁴ Nilsson, B.⁵

20
- 0028608099
- Bottomley, S.P.; Popplewell, A.G.; Scawen, M.; Wan, T.; Sutton, B.J.; Gore, M.G. Protein Eng. 1994, 7, 1463-1470.
- (1994) Protein Eng. , vol.7 , pp. 1463-1470
- Bottomley, S.P.¹ Popplewell, A.G.² Scawen, M.³ Wan, T.⁴ Sutton, B.J.⁵ Gore, M.G.⁶

21
- 0030755502
- Bai, Y.W.; Karimi, A.; Dyson, H.J.; Wright, P.E. Protein Sci. 1997, 6, 1449-1457.
- (1997) Protein Sci. , vol.6 , pp. 1449-1457
- Bai, Y.W.¹ Karimi, A.² Dyson, H.J.³ Wright, P.E.⁴

22
- 0032606941
- Takada, S.; Luthey-Schulten, Z.; Wolyues, P.G. J. Chem. Phys. 1999, 110, 11 616-11 629.
- (1999) J. Chem. Phys. , vol.110 , pp. 11616-11629
- Takada, S.¹ Luthey-Schulten, Z.² Wolyues, P.G.³

23
- 0030967896
- Guo, Z.Y.; Brooks, III, C.L.; Boczko, E.M. Proc. Natl. Acad. Sci. (USA) 1997, 94, 10 161-10 166.
- (1997) Proc. Natl. Acad. Sci. (USA) , vol.94 , pp. 10161-10166
- Guo, Z.Y.¹ Brooks C.L. III² Boczko, E.M.³

24
- 0035189984
- Takada, S. Porteins 2001, 42, 85-98.
- (2001) Porteins , vol.42 , pp. 85-98
- Takada, S.¹

25
- 0034602807
- Alonso, D.O.V.; Daggett, V. Proc. Natl. Acad. Sci. (USA) 2000, 97, 133-138.
- (2000) Proc. Natl. Acad. Sci. (USA) , vol.97 , pp. 133-138
- Alonso, D.O.V.¹ Daggett, V.²

26
- 0028326042
- Kolinski, A.; Skolnick, J. Proteins. 1994, 18, 353-366.
- (1994) Proteins , vol.18 , pp. 353-366
- Kolinski, A.¹ Skolnick, J.²

27
- 0026801084
- Gouda, H.; Torigoe, H.; Saito, A.; Sato, M.; Arata, Y.; Shimada, I. Biochemistry 1992, 31, 9665-9672.
- (1992) Biochemistry , vol.31 , pp. 9665-9672
- Gouda, H.¹ Torigoe, H.² Saito, A.³ Sato, M.⁴ Arata, Y.⁵ Shimada, I.⁶

28
- 0000036869
- Neria, E.; Fischer, S.; Karplus, M. J. Chem. Phys. 1996, 105, 1902-1921.
- (1996) J. Chem. Phys. , vol.105 , pp. 1902-1921
- Neria, E.¹ Fischer, S.² Karplus, M.³

29
- 36849103820
- Weeks, J.D.; Chandler, D.; Andersen, H.C. J. Chem. Phys. 1971, 54, 5237-5247.
- (1971) J. Chem. Phys. , vol.54 , pp. 5237-5247
- Weeks, J.D.¹ Chandler, D.² Andersen, H.C.³

30
- 0002845060
- Sherwood, A.E.; Prausnitz, J.M. J. Chem. Phys. 1964, 41, 429-437.
- (1964) J. Chem. Phys. , vol.41 , pp. 429-437
- Sherwood, A.E.¹ Prausnitz, J.M.²

31
- 0016696599
- Taketomi, H.; Ueda, Y.; Gō, N. Int. J. Peptide and Protein Res. 1975, 7, 445-459.
- (1975) Int. J. Peptide and Protein Res. , vol.7 , pp. 445-459
- Taketomi, H.¹ Ueda, Y.² Go, N.³

32
- 0032750509
- Martinez, J.C.; Serrano, L. Nature Struct. Biol. 1999, 6, 1010-1016.
- (1999) Nature Struct. Biol. , vol.6 , pp. 1010-1016
- Martinez, J.C.¹ Serrano, L.²

33
- 0032734515
- Riddle, D.S.; Grantcharova, V.P.; Santiago, J.V.; Alm, E.; Ruczinski, I.; Baker, D. Nature Struct. Biol. 1999, 6, 1016-1024.
- (1999) Nature Struct. Biol. , vol.6 , pp. 1016-1024
- Riddle, D.S.¹ Grantcharova, V.P.² Santiago, J.V.³ Alm, E.⁴ Ruczinski, I.⁵ Baker, D.⁶

34
- 0033613165
- Muñoz, V.; Eaton, W.A. Proc. Natl Acad. Sci. (USA) 1999, 96, 11 311-11 316.
- (1999) Proc. Natl Acad. Sci. (USA) , vol.96 , pp. 11311-11316
- Muñoz, V.¹ Eaton, W.A.²

35
- 0032742688
- Takada, S. Proc. Natl. Acad. Sci. (USA) 1999, 96, 11 698-11 700.
- (1999) Proc. Natl. Acad. Sci. (USA) , vol.96 , pp. 11698-11700
- Takada, S.¹

36
- 0034604105
- Baker, D. Nature 2000, 405, 39-42.
- (2000) Nature , vol.405 , pp. 39-42
- Baker, D.¹

37
- 0001015060
- Zhou, Y.; Karplus, M.; Wichert, J.M.; Hall, C.K. J. Chem. Phys. 1997, 107, 10 691-10 708.
- (1997) J. Chem. Phys. , vol.107 , pp. 10691-10708
- Zhou, Y.¹ Karplus, M.² Wichert, J.M.³ Hall, C.K.⁴

38
- 0000936038
- Lindemann, F.A. Physik. Z. 1910, 11, 609-612.
- (1910) Physik. Z. , vol.11 , pp. 609-612
- Lindemann, F.A.¹

39
- 0001587354
- Stillinger, F.H.; Stillinger, D.K. J. Chem. Phys. 1990, 93, 6013-6024.
- (1990) J. Chem. Phys. , vol.93 , pp. 6013-6024
- Stillinger, F.H.¹ Stillinger, D.K.²

40
- 0033613906
- Zhou, Y.; Vitkup, D.; Karplus, M. J. Mol. Biol. 1999, 285, 1371-1375.
- (1999) J. Mol. Biol. , vol.285 , pp. 1371-1375
- Zhou, Y.¹ Vitkup, D.² Karplus, M.³

41
- 0038679626
- Löwen, H. Phys. Rep. 1994, 237, 249-324.
- (1994) Phys. Rep. , vol.237 , pp. 249-324
- Löwen, H.¹

42
- 11344259128
- Stillinger, F.H. Science 1995, 267, 1935-1939.
- (1995) Science , vol.267 , pp. 1935-1939
- Stillinger, F.H.¹

43
- 33646987405
- Ferrenberg, A.M.; Swendsen, R.H. Phys. Rev. Lett. 1989, 63, 1195-1197.
- (1989) Phys. Rev. Lett. , vol.63 , pp. 1195-1197
- Ferrenberg, A.M.¹ Swendsen, R.H.²

44
- 0001351693
- Zhou, Y.; Hall, C.K.; Karplus, M. Phys. Rev. Lett. 1996, 77, 2822-2825.
- (1996) Phys. Rev. Lett. , vol.77 , pp. 2822-2825
- Zhou, Y.¹ Hall, C.K.² Karplus, M.³

45
- 0001092739
- Kunz, R.E.; Berry, R.S. Phys. Rev. Lett. 1993, 71, 3987.
- (1993) Phys. Rev. Lett. , vol.71 , pp. 3987
- Kunz, R.E.¹ Berry, R.S.²

46
- 0008863560
- Kauzmann, W. Adv. Protein Chem. 1959, 14, 1-63.
- (1959) Adv. Protein Chem. , vol.14 , pp. 1-63
- Kauzmann, W.¹

47
- 0001339532
- Kraulis, P. J. Applied Cryst. 1991, 24, 946-950.
- (1991) J. Applied Cryst. , vol.24 , pp. 946-950
- Kraulis, P.¹

48
- 0035917318
- Shimada, J.; Kussell, E.L.; Shakhnovich, E.I. J. Mol. Biol. 2000, 308, 79-95.
- (2000) J. Mol. Biol. , vol.308 , pp. 79-95
- Shimada, J.¹ Kussell, E.L.² Shakhnovich, E.I.³

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