Fine-tuning of the binding and dissociation of CO by the amino acids of the heme pocket of Coprinus cinereus peroxidase

Biochemistry

Volumn 41, Issue 44, 2002, Pages 13264-13273

  Feis, Alessandro ^a   Santoni, Elisa ^a   Neri, Francesca ^a   Ciaccio, Chiara ^b   De Sanctis, Giampiero ^c   Coletta, Massimo ^b   Welinder, Karen G ^d   Smulevich, Giulietta ^a  

^a UNIVERSITY OF FLORENCE   (Italy)

^b UNIVERSITY OF ROME TOR VERGATA   (Italy)

^c UNIVERSITY OF CAMERINO   (Italy)

^d AALBORG UNIVERSITY   (Denmark)

Author keywords

[No Author keywords available]

Indexed keywords

MUTANTS;

AMINO ACIDS; CARBON MONOXIDE; PROTEINS;

BIOCHEMISTRY;

AMINO ACID; CARBON MONOXIDE; CYTOCHROME C OXIDASE; HEMOPROTEIN;

ABSORPTION SPECTROSCOPY; ARTICLE; BINDING KINETICS; COMPLEX FORMATION; COPRINUS; CRYSTAL STRUCTURE; DISSOCIATION CONSTANT; GENE MUTATION; INFRARED SPECTROMETRY; LIGAND BINDING; NONHUMAN; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; PH; PLANT; PRIORITY JOURNAL; PROTEIN BINDING; PROTEIN STRUCTURE; RAMAN SPECTROMETRY;

AMINO ACID SUBSTITUTION; AMINO ACIDS; ANIONS; ARGININE; ASPARAGINE; ASPARTIC ACID; CARBON MONOXIDE; COPRINUS; CYTOCHROME-C PEROXIDASE; FERROUS COMPOUNDS; HEME; KINETICS; LIGANDS; MUTATION; PEROXIDASE; PHENYLALANINE; PROTEIN BINDING; SPECTROPHOTOMETRY, INFRARED; SPECTRUM ANALYSIS, RAMAN;

COPRINOPSIS CINEREA; COPRINUS;

EID: 0037027305     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi026203c     Document Type: Article

References (34)

1. Phillips, G. N. J., Teodoro, M. L., Smith, B., and Olson, J. S. (1999) J. Phys. Chem. B 103, 8817-8829.
2. Ray, G. B., Li, X.-Y., Ibers, J. A., Sessler, J. L., and Spiro, T. G. (1994) J. Am. Chem. Soc. 116, 162-176.
3. Li, T., Quillin, M. L., Phillips, G. N.. Jr., and Olson, J. S. (1994) Biochemistry 33, 1433-1446.
4. Uno, T., Nishimura, Y., Tsuboi, M., Makino, R., Iizuka, T., and Ishimura, Y. (1987) J. Biol. Chem. 262, 4549-4556.
5. Feis, A., Rodriguez-Lopez, J. N., Thomeley, R. N. F., and Smulevich, G. (1998) Biochemistry 37, 13575-13581.
6. Smulevich, G., Mauro, J. M., Fishel, L. A., English, A. M., Kraut, J., and Spiro, T. G. (1988) Biochemistry 27, 5486-5492.
7. Miller, M. A., Mauro, J. M., Smulevich, G., Coletta, M., Kraut, J., and Traylor, T. G. (1990) Biochemistry 29, 9978-9988.
8. Springer, B. A., Sligar, S. G., Olson, J. S., and Phillips, G. N. J. (1994) Chem. Rev. 94, 699-714.
9. Abelskov, A. K., Smith, A. T., Rasmussen, C. B., Dunford, H. B., and Welinder, K. G. (1997) Biochemistry 36, 9453-9463.
10. Petersen, J. W. F., Kadziola, A., and Larsen, S. (1994) FEBS Lett. 339, 291-296.
11. Kunishima, N., Amada, F., Fukuyama, K., Kawamoto, M., Matsunaga, T., and Matsubara, H. (1996) FEBS Lett. 378, 291- 294.
12. Gajhede, M., Schuller, D. J., Henriksen, A., Smith, A. T., and Poulos, T. L. (1997) Nat. Struct. Biol. 4, 1032-1038.
13. Finzel, B. C., Poulos, T. L., and Kraut, J. (1984) J. Biol. Chem. 259, 13027-13036.
14. Neri, F., Indiani, C., Welinder, K. G., and Smulevich, G. (1998) Eur. J. Biochem. 251, 830-838.
15. Neri, F., Indiani, C., Baldi, B., Vind, J., Welinder, K. G., and Smulevich, G. (1999) Biochemistry 38, 7819-7827.
16. Dalbøge, H., Jensen, E. B., and Welinder, K. G. (1992) Pat. Appl. WO 92/16634.
17. Smulevich, G., Feis, A., Focardi, C., and Welinder, K. G. (1994) Biochemistry 33, 15425-15432.
18. Smulevich, G., Neri, F., Marzocchi, M. P., and Welinder, K. G. (1996) Biochemistry 35, 10576-10585.
19. Coletta, M., Ascoli, F., Brunori, M., and Traylor, T. G. (1986) J. Biol. Chem. 261, 9811-9814.
20. Wittenberg, B. A., Antonini, E., Brunori, M., Noble, W., Jr., Wittenberg, J. B., and Wyman, J. (1967) Biochemistry 6, 1970-1974.
21. Heering, H. A., Jansen, M. A., Thomeley, R. N., and Smulevich, G. (2001) Biochemistry 40, 10360-10370.
22. Satterlee, J. D., and Erman, J. E. (1984) J. Am. Chem. Soc. 106, 1139-1140.
23. Smith, M. L., Ohlsson, P.-I., and Paul, K. G. (1983) FEBS Lett. 163, 303-305.
24. Smulevich, G., Paoli, M., De Sanctis, G., Mantini, A. R., Ascoli, F., and Coletta, M. (1997) Biochemistry 36, 640-649.
25. Smulevich, G., Evangelista-Kirkup, R., English, A., and Spiro, T. G. (1986) Biochemistry 25, 4426-4430.
26. Edwards, S. L., and Poulos, T. L. (1990) J. Biol. Chem. 265, 2588-2595.
27. Barlow, C. H., Ohlsson, P.-I., and Paul, K. G. (1976) Biochemistry 15, 2225-2229.
28. Holzbaur, I. E., English, A. M., and Ismail, A. A. (1996) J. Am. Chem. Soc. 118, 3354-3359.
29. Rodriguez-Lopez, J. N., George, S. J., and Thorneley, R. N. F. (1998) J. Biol. Inorg. Chem. 3, 44-52.
30. Vogel, K. M., Kozlowski, P. M., Zgierski, M. Z., and Spiro, T. G. (2000) Inorg. Chim. Acta 297, 11-17.
31. Shimada, H., and Caughey, W. S. (1982) J. Biol. Chem. 357, 11893.
32. Evangelista-Kirkup, R.. Smulevich, G., and Spiro, T. G. (1986) Biochemistry 25, 4420-4425.
33. Heering, H. A., Smith, A. T., and Smulevich, G. (2002) Biochem. J. 363, 571-579.
34. Kunishima, N., Fukuyama, K., Matsubara, H., Hatanaka, H., Shibano, Y., and Amachi, T. (1994) J. Mol. Biol. 235, 331-344.