Comparative study of satellite DNA in ants of the Messor genus

Gene

Volumn 297, Issue 1-2, 2002, Pages 113-122

  Lorite, Pedro ^a   Carrillo, José A ^a   Tinaut, Alberto ^b   Palomeque, Teresa ^a  

^a UNIVERSITY OF JAÉN   (Spain)

^b UNIVERSITY OF GRANADA   (Spain)

Author keywords

CENP B like motif; Formicidae; Gene conversion; Hymenoptera; Satellite DNA evolution

Indexed keywords

MONOMER; SATELLITE DNA;

ANT; ARTICLE; COMPARATIVE STUDY; GENE CONVERSION; GENE IDENTIFICATION; GENE SEQUENCE; GENOME; GEOGRAPHIC DISTRIBUTION; INSECT GENETICS; INVERTED REPEAT; MESSOR GENUS; NONHUMAN; NUCLEOTIDE SEQUENCE; POPULATION; PRIORITY JOURNAL; PROTEIN MOTIF; SPECIES DIFFERENTIATION;

ANIMALS; ANTS; BASE SEQUENCE; CLONING, MOLECULAR; DNA; DNA, SATELLITE; MOLECULAR SEQUENCE DATA; PHYLOGENY; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY, NUCLEIC ACID; SPECIES SPECIFICITY;

FORMICIDAE; HYMENOPTERA; MESSOR; MESSOR BARBARUS; MESSOR BOUVIERI; MESSOR STRUCTOR;

EID: 0037019805     PISSN: 03781119     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0378-1119(02)00875-2     Document Type: Article

References (36)

1. Betrán E., Rozas J., Navarro A., Barbadilla A. The estimation of the number and the length distribution of gene conversion tracts from population DNA sequence data. Genetics. 146:1997;89-99.
2. Bigot Y., Hamelin M., Periquet G. Heterochromatin condensation and evolution of unique satellite-DNA families in two parasitic wasp species: Diadromus pulchellus and Eupelmus vuilleti (Hymenoptera). Mol. Biol. Evol. 7:1990;351-364.
3. Canapa A., Barucca M., Cerione P.N., Olmo E. A satellite DNA containing CENP-B box-like motifs is present in the Antarctic scallop Adamussium colbecki. Gene. 247:2000;175-180.
4. Capriglione T., De Santo M.G., Odierna G., Olmo E. An alphoid-like satellite DNA sequence is present in the genome of a Lacertid lizard. J. Mol. Evol. 46:1998;240-244.
5. Charlesworth B., Sniegowsky P., Stephan W. The evolutionary dynamics of repetitive DNA in eukaryotes. Nature. 371:1994;215-220.
6. Craig J.M., Earnshaw W.C., Vagnarelli P. Mammalian centromeres: DNA sequence, protein composition, and role in cell cycle progression. Exp. Cell Res. 246:1999;249-262.
7. De la Herrán R., Fontana F., Lanfredi M., Congiu L., Leis M., Rossi R., Ruiz-Rejón C., Ruíz-Rejón M., Garrido-Ramos A. Slow rates of evolution and sequence homogenization in an ancient satellite DNA family of sturgeons. Mol. Biol. Evol. 18:2001;432-436.
8. Dover G.A. Molecular drive in multigene families: how biological novelties arise, spread and are assimilated. Trends Genet. 2:1986;159-165.
9. Heinze J., Gadau J., Hölldobler B., Nanda I., Schmid M., Scheller K. Genetic variability in the ant Camponotus floridanus detected by multilocus fingerprinting. Naturwissenschaften. 81:1994;34-36.
10. Heikkinen E., Launonen V., Müler E., Bachmann L. The pvB370 BamHI satellite DNA family of the Drosophila virilis Group and its evolutionary relation to mobile dispersed genetic pDv elements. J. Mol. Evol. 41:1995;604-614.
11. Hudson D.F., Fowler K.J., Earle E., Saffery R., Kalitsis P., Trowel H., Hill J., Wreford N.G., de Kretser D.M., Cancilla M.R., Howman E., Hii L., Cutts S.M., Irvine D.V., Choo K.H.A. Centromere protein B null mice are mitotically and meiotically normal but have lower body and testis weight. J. Cell Biol. 141:1998;309-319.
12. Jukes T.H., Cantor C.R. Evolution of protein molecules. Munro H.N., Mammalian Protein Metabolism. 1969;21-132 Academic Press, New York.
13. Kimura M. A simple method for estimating evolutionary rates of bases substitutions. J. Mol. Evol. 16:1980;111-120.
14. Kipling D., Warburton P.B. Centromeres, CENP-B and Tigger too. Trends Genet. 13:1997;141-144.
15. Kumar S., Tamura K., Nei M. MEGA: Molecular Evolutionary Genetics Analysis. Version 1.01. 1993;Pennsylvania State University, University Park, PA.
16. Landais I., Chavigny P., Castagnone C., Pizzol J., Abad P., Vanlerberghe-Masutti F. Characterization of a highly conserved satellite DNA from the parasitoid wasp Trichogramma brassicae. Gene. 255:2000;65-73.
17. López C.C., Edström J.E. Interdispersed centromeric element with a CEP-B box-like motif in Chrironomus pallidivittatus. Nucleic Acids Res. 26:1998;4168-4172.
18. Lorite P., García M.F., Palomeque T. Satellite DNA in the ant Messor structor. Genome. 42:1999;881-886.
19. Lorite P., Renault S., Rouleux-Bonnin F., Bigot S., Periquet G., Palomeque T. Genomic organization and transcription of satellite DNA in the ant Aphaenogaster subterranea (Hymenoptera, Formicidae). Genome. 45:2002;609-616.
20. Masumoto H., Masukata H., Muro Y., Nozaki N., Okazaki T. A human centromere antigen (CENP-B) interacts with a short specific sequence in alphoid DNA, a human centromeric satellite. J. Cell Biol. 109:1989;1963-1973.
21. Mravinac B., Plohl M., Meštrović N., Ugarković D. Sequence of PRAT satellite 'frozen' in some coleopteran species. J. Mol. Evol. 54:2002;774-783.
22. Nei M., Miller J.C. A simple method for estimating average number of nucleotide substitutions within and between populations from restriction data. Genetics. 125:1990;873-879.
23. Pages M., Roizes G. Structural organization of satellite I chromatin of calf liver. Eur. J. Biochem. 174:1988;391-398.
24. Renault S., Rouleux-Bonnin F., Periquet G., Bigot Y. Satellite DNA transcription in Diadromus pulchellus (Hymenoptera). Insect Biochem. Mol. Biol. 29:1999;103-111.
25. Rouleux-Bonnin F., Renault S., Bigot Y., Periquet G. Transcription of four satellite DNA subfamilies in Diprion pini (Hymenoptera, Symphyta, Diprionidae). Eur. J. Biochem. 238:1996;752-759.
26. Rojas-Rousse D., Bigot Y., Periquet G. DNA insertions as a component of the evolution of the unique satellite DNA families in two genera of parasitoid wasps: Diadromus and Eupelmus (Hymenoptera). Mol. Biol. Evol. 10:1993;383-396.
27. Rozas J., Rozas R. DnaSP version 3: and integrated program for molecular population genetics and molecular evolution analysis. Bioinformatics. 15:1999;174-175.
28. Saitou N., Nei M. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4:1987;406-425.
29. Sambrook J., Fritsch E.F., Maniatis T. Molecular Cloning: A Laboratory Manual. 2nd Edition: 1989;Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
30. Sonoda S., Yamada T., Naito T., Nakasuji F. Repetitive DNA sequence families in Hemitaxonus minomensis and H. athyrii (Hymenoptera: Tenthredinidae). Jpn. J. Genet. 70:1995;7-16.
31. Stitou S., Díaz de la Guardia R., Jiménez R., Burgos R. Isolation of a species-specific satellite DNA with a novel CENP-B-like box from the North African rodent Lemniscomys barbarus. Exp. Cell Res. 250:1999;381-386.
32. Strachan T., Webb D., Dover G.A. Transition stages of molecular drive in multiple-copy DNA families in Drosophila. EMBO J. 4:1985;1701-1708.
33. Strimmer K., Goldman N., Von Haeseler A. Bayesian probabilities and quartet puzzling. Mol. Biol. Evol. 14:1997;210-211.
34. Tarès S., Cornuet J., Abad P. Characterization of an unusually conserved AluI highly reiterated DNA sequence family from the honeybee, Apis mellifera. Genetics. 134:1993;1195-1204.
35. Van Hooser A.A., Mancini M.A., Allis C.D., Sullivan K.F., Brinkley B.R. The mammalian centromere: structural domains and the attenuation of chromatin modeling. FASEB J. 13:(Suppl.):1999;S216-S220.
36. Wong A.K.C., Rattner J.B. Sequence organization and cytological localization of the minor satellite of mouse. Nucleic Acids Res. 16:1988;11645-11661.